RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 CROCC2H7BZ55 1655 aa9.98□□□□□ -0.81
CRNKL1-202ENST00000377340 PTCH1Q13635 1447 aa9.98□□□□□ -0.81
CRNKL1-202ENST00000377340 TULP4Q9NRJ4 1543 aa9.98□□□□□ -0.81
CRNKL1-202ENST00000377340 RPS6KA4O75676 772 aa9.98□□□□□ -0.81
CRNKL1-202ENST00000377340 ANKRD1Q15327 319 aa9.98□□□□□ -0.81
CRNKL1-202ENST00000377340 SYNE4Q8N205 404 aa9.98□□□□□ -0.81
CRNKL1-202ENST00000377340 SAP30BPQ9UHR5 308 aaKnown RBP9.98□□□□□ -0.81
CRNKL1-202ENST00000377340 CRB1P82279 1406 aa9.97□□□□□ -0.81
CRNKL1-202ENST00000377340 HEG1Q9ULI3 1381 aa9.97□□□□□ -0.81
CRNKL1-202ENST00000377340 MAGEB6P1A0A0J9YX57 407 aa9.97□□□□□ -0.81
CRNKL1-202ENST00000377340 ARHGEF1Q92888 912 aaKnown RBP9.97□□□□□ -0.81
CRNKL1-202ENST00000377340 SDF4Q9BRK5 362 aa9.97□□□□□ -0.81
CRNKL1-202ENST00000377340 BACH2Q9BYV9 841 aa9.97□□□□□ -0.81
CRNKL1-202ENST00000377340 HDAC1Q13547 482 aaPredicted RBP9.97□□□□□ -0.81
CRNKL1-202ENST00000377340 LRRC24Q50LG9 513 aa9.97□□□□□ -0.81
CRNKL1-202ENST00000377340 CHMP5Q9NZZ3 219 aa9.97□□□□□ -0.81
CRNKL1-202ENST00000377340 SLC12A7Q9Y666 1083 aa9.97□□□□□ -0.81
CRNKL1-202ENST00000377340 CPSF1Q10570 1443 aaKnown RBP9.97□□□□□ -0.81
CRNKL1-202ENST00000377340 PDCP20941 246 aa9.97□□□□□ -0.81
CRNKL1-202ENST00000377340 NUCB1Q02818 461 aa9.97□□□□□ -0.81
CRNKL1-202ENST00000377340 TTC22Q5TAA0 569 aa9.97□□□□□ -0.81
CRNKL1-202ENST00000377340 DPY19L2Q6NUT2 758 aa9.97□□□□□ -0.81
CRNKL1-202ENST00000377340 CCDC83Q8IWF9 413 aa9.97□□□□□ -0.81
CRNKL1-202ENST00000377340 PUS3Q9BZE2 481 aaKnown RBP9.97□□□□□ -0.81
CRNKL1-202ENST00000377340 ZHX3Q9H4I2 956 aa9.97□□□□□ -0.81
CRNKL1-202ENST00000377340 KIF24Q5T7B8 1368 aa9.97□□□□□ -0.81
CRNKL1-202ENST00000377340 BLMP54132 1417 aaPredicted RBP9.96□□□□□ -0.81
CRNKL1-202ENST00000377340 TMEM132AQ24JP5 1023 aa9.96□□□□□ -0.81
CRNKL1-202ENST00000377340 TNNI3KQ59H18 835 aa9.96□□□□□ -0.81
CRNKL1-202ENST00000377340 TMEM67Q5HYA8 995 aa9.96□□□□□ -0.81
CRNKL1-202ENST00000377340 CHST3Q7LGC8 479 aa9.96□□□□□ -0.81
CRNKL1-202ENST00000377340 EDC3Q96F86 508 aaKnown RBP9.96□□□□□ -0.81
CRNKL1-202ENST00000377340 FPGT-TNNI3KV9GXZ4 949 aa9.96□□□□□ -0.81
CRNKL1-202ENST00000377340 BECN2A8MW95 431 aa9.96□□□□□ -0.81
CRNKL1-202ENST00000377340 SSBP05455 408 aaKnown RBP eCLIP9.96□□□□□ -0.81
CRNKL1-202ENST00000377340 TSPY3P0CV98 308 aa9.96□□□□□ -0.81
CRNKL1-202ENST00000377340 TSPY8P0CW00 308 aa9.96□□□□□ -0.81
CRNKL1-202ENST00000377340 SCNN1DP51172 638 aa9.96□□□□□ -0.81
CRNKL1-202ENST00000377340 MFSD14BQ5SR56 506 aa9.96□□□□□ -0.81
CRNKL1-202ENST00000377340 BEND3Q5T5X7 828 aa9.96□□□□□ -0.81
CRNKL1-202ENST00000377340 CCDC73Q6ZRK6 1079 aa9.96□□□□□ -0.81
CRNKL1-202ENST00000377340 TEX11Q8IYF3 940 aa9.96□□□□□ -0.81
CRNKL1-202ENST00000377340 SEC63Q9UGP8 760 aaKnown RBP9.96□□□□□ -0.81
CRNKL1-202ENST00000377340 PCCAP05165 728 aaPredicted RBP9.96□□□□□ -0.82
CRNKL1-202ENST00000377340 NEXMIFQ5QGS0 1516 aa9.96□□□□□ -0.82
CRNKL1-202ENST00000377340 ZFYP08048 801 aaPredicted RBP9.96□□□□□ -0.82
CRNKL1-202ENST00000377340 NUCB2P80303 420 aa9.96□□□□□ -0.82
CRNKL1-202ENST00000377340 STK38Q15208 465 aa9.96□□□□□ -0.82
CRNKL1-202ENST00000377340 C21orf2O43822 256 aa9.95□□□□□ -0.82
CRNKL1-202ENST00000377340 MBD4O95243 580 aa9.95□□□□□ -0.82
CRNKL1-202ENST00000377340 MCM2P49736 904 aa9.95□□□□□ -0.82
CRNKL1-202ENST00000377340 BCAMP50895 628 aa9.95□□□□□ -0.82
CRNKL1-202ENST00000377340 SUSD4Q5VX71 490 aa9.95□□□□□ -0.82
CRNKL1-202ENST00000377340 NLRP10Q86W26 655 aa9.95□□□□□ -0.82
CRNKL1-202ENST00000377340 LPIN2Q92539 896 aa9.95□□□□□ -0.82
CRNKL1-202ENST00000377340 CDK5RAP3Q96JB5 506 aa9.95□□□□□ -0.82
CRNKL1-202ENST00000377340 DENND2AQ9ULE3 1009 aa9.95□□□□□ -0.82
CRNKL1-202ENST00000377340 ZMYM4Q5VZL5 1548 aa9.95□□□□□ -0.82
CRNKL1-202ENST00000377340 FRMPD1Q5SYB0 1578 aa9.95□□□□□ -0.82
CRNKL1-202ENST00000377340 TPM4P67936 248 aa9.95□□□□□ -0.82
CRNKL1-202ENST00000377340 TTLL5Q6EMB2 1281 aa9.95□□□□□ -0.82
CRNKL1-202ENST00000377340 DBNDD1Q9H9R9 158 aa9.95□□□□□ -0.82
CRNKL1-202ENST00000377340 AATFQ9NY61 560 aaKnown RBP eCLIP9.95□□□□□ -0.82
CRNKL1-202ENST00000377340 ERBB4Q15303 1308 aa9.95□□□□□ -0.82
CRNKL1-202ENST00000377340 GOLGA8BA8MQT2 603 aa9.95□□□□□ -0.82
CRNKL1-202ENST00000377340 H7C1D1 291 aa9.95□□□□□ -0.82
CRNKL1-202ENST00000377340 PRDM1O75626 825 aa9.95□□□□□ -0.82
CRNKL1-202ENST00000377340 NMIQ13287 307 aaPredicted RBP9.95□□□□□ -0.82
CRNKL1-202ENST00000377340 MCMDC2Q4G0Z9 681 aa9.95□□□□□ -0.82
CRNKL1-202ENST00000377340 CCDC47Q96A33 483 aaKnown RBP9.95□□□□□ -0.82
CRNKL1-202ENST00000377340 TTF2Q9UNY4 1162 aaKnown RBP9.95□□□□□ -0.82
CRNKL1-202ENST00000377340 CDC42BPGQ6DT37 1551 aa9.95□□□□□ -0.82
CRNKL1-202ENST00000377340 RAD17O75943 681 aa9.94□□□□□ -0.82
CRNKL1-202ENST00000377340 ZYXQ15942 572 aaKnown RBP9.94□□□□□ -0.82
CRNKL1-202ENST00000377340 CATIPQ7Z7H3 387 aa9.94□□□□□ -0.82
CRNKL1-202ENST00000377340 KAT14Q9H8E8 782 aa9.94□□□□□ -0.82
CRNKL1-202ENST00000377340 SPATA31A5Q5VU36 1347 aa9.94□□□□□ -0.82
CRNKL1-202ENST00000377340 SPATA31A7Q8IWB4 1347 aa9.94□□□□□ -0.82
CRNKL1-202ENST00000377340 FER1L4A9Z1Z3 1794 aa9.94□□□□□ -0.82
CRNKL1-202ENST00000377340 SNAP23O00161 211 aa9.94□□□□□ -0.82
CRNKL1-202ENST00000377340 EZH2Q15910 746 aaKnown RBP9.94□□□□□ -0.82
CRNKL1-202ENST00000377340 BMP2KLQ5H9B9 411 aa9.94□□□□□ -0.82
CRNKL1-202ENST00000377340 KRT18P05783 430 aaKnown RBP9.94□□□□□ -0.82
CRNKL1-202ENST00000377340 CHRNDQ07001 517 aa9.94□□□□□ -0.82
CRNKL1-202ENST00000377340 PLS1Q14651 629 aa9.94□□□□□ -0.82
CRNKL1-202ENST00000377340 RAB3GAP1Q15042 981 aa9.94□□□□□ -0.82
CRNKL1-202ENST00000377340 DLGAP5Q15398 846 aa9.94□□□□□ -0.82
CRNKL1-202ENST00000377340 CCDC129Q6ZRS4 1044 aa9.94□□□□□ -0.82
CRNKL1-202ENST00000377340 FBXO41Q8TF61 875 aa9.94□□□□□ -0.82
CRNKL1-202ENST00000377340 GPR101Q96P66 508 aaPredicted RBP9.94□□□□□ -0.82
CRNKL1-202ENST00000377340 GOLGA8AA7E2F4 631 aa9.93□□□□□ -0.82
CRNKL1-202ENST00000377340 CDKL5O76039 1030 aa9.93□□□□□ -0.82
CRNKL1-202ENST00000377340 ZAP70P43403 619 aa9.93□□□□□ -0.82
CRNKL1-202ENST00000377340 SUPT20HQ8NEM7 779 aa9.93□□□□□ -0.82
CRNKL1-202ENST00000377340 ARMT1Q9H993 441 aa9.93□□□□□ -0.82
CRNKL1-202ENST00000377340 RNF113AO15541 343 aaKnown RBP9.93□□□□□ -0.82
CRNKL1-202ENST00000377340 WDR66Q8TBY9 1149 aa9.93□□□□□ -0.82
CRNKL1-202ENST00000377340 BRF1Q92994 677 aa9.93□□□□□ -0.82
CRNKL1-202ENST00000377340 NEK1Q96PY6 1258 aa9.93□□□□□ -0.82
CRNKL1-202ENST00000377340 RBM8AQ9Y5S9 174 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms