RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 ZBTB7BO15156 539 aaPredicted RBP20.63■□□□□ 0.89
CLSTN1-202ENST00000377298 ARHGAP29Q52LW3 1261 aa20.63■□□□□ 0.89
CLSTN1-202ENST00000377298 G2E3Q7L622 706 aa20.63■□□□□ 0.89
CLSTN1-202ENST00000377298 UBA5Q9GZZ9 404 aa20.63■□□□□ 0.89
CLSTN1-202ENST00000377298 DNAI2Q9GZS0 605 aa20.63■□□□□ 0.89
CLSTN1-202ENST00000377298 KIAA1328Q86T90 577 aa20.63■□□□□ 0.89
CLSTN1-202ENST00000377298 LGR6Q9HBX8 967 aa20.63■□□□□ 0.89
CLSTN1-202ENST00000377298 FAM177A1Q8N128 213 aaPredicted RBP20.62■□□□□ 0.89
CLSTN1-202ENST00000377298 IQCEQ6IPM2 695 aa20.62■□□□□ 0.89
CLSTN1-202ENST00000377298 TRIM35Q9UPQ4 493 aa20.62■□□□□ 0.89
CLSTN1-202ENST00000377298 SBNO2Q9Y2G9 1366 aa20.62■□□□□ 0.89
CLSTN1-202ENST00000377298 RRP9O43818 475 aaKnown RBP20.62■□□□□ 0.89
CLSTN1-202ENST00000377298 LRRC27Q9C0I9 530 aa20.61■□□□□ 0.89
CLSTN1-202ENST00000377298 EYA2O00167 538 aa20.61■□□□□ 0.89
CLSTN1-202ENST00000377298 MYCNP04198 464 aaPredicted RBP20.61■□□□□ 0.89
CLSTN1-202ENST00000377298 UBE2HP62256 183 aa20.61■□□□□ 0.89
CLSTN1-202ENST00000377298 ALG1Q9BT22 464 aa20.61■□□□□ 0.89
CLSTN1-202ENST00000377298 RBM27Q9P2N5 1060 aaKnown RBP20.61■□□□□ 0.89
CLSTN1-202ENST00000377298 MAGI2Q86UL8 1455 aa20.61■□□□□ 0.89
CLSTN1-202ENST00000377298 ZSCAN22P10073 491 aaPredicted RBP20.61■□□□□ 0.89
CLSTN1-202ENST00000377298 NECAB1Q8N987 351 aa20.61■□□□□ 0.89
CLSTN1-202ENST00000377298 CNBD1Q8NA66 436 aa20.61■□□□□ 0.89
CLSTN1-202ENST00000377298 RBM17Q96I25 401 aaKnown RBP20.61■□□□□ 0.89
CLSTN1-202ENST00000377298 CALM1P0DP23 149 aa20.61■□□□□ 0.89
CLSTN1-202ENST00000377298 CALM2P0DP24 149 aa20.61■□□□□ 0.89
CLSTN1-202ENST00000377298 CALM3P0DP25 149 aa20.61■□□□□ 0.89
CLSTN1-202ENST00000377298 Q6ZUG5 572 aa20.61■□□□□ 0.89
CLSTN1-202ENST00000377298 CKAP2LQ8IYA6 745 aa20.61■□□□□ 0.89
CLSTN1-202ENST00000377298 CCDC102BQ68D86 513 aa20.61■□□□□ 0.89
CLSTN1-202ENST00000377298 PLEKHM2Q8IWE5 1019 aa20.61■□□□□ 0.89
CLSTN1-202ENST00000377298 FAM89AQ96GI7 184 aa20.61■□□□□ 0.89
CLSTN1-202ENST00000377298 LRRC2Q9BYS8 371 aa20.6■□□□□ 0.89
CLSTN1-202ENST00000377298 INSRP06213 1382 aa20.6■□□□□ 0.89
CLSTN1-202ENST00000377298 PRC1O43663 620 aa20.6■□□□□ 0.89
CLSTN1-202ENST00000377298 GDPD2Q9HCC8 539 aa20.6■□□□□ 0.89
CLSTN1-202ENST00000377298 LDHBP07195 334 aaKnown RBP20.6■□□□□ 0.89
CLSTN1-202ENST00000377298 PICALMQ13492 652 aa20.6■□□□□ 0.89
CLSTN1-202ENST00000377298 CACNA2D4Q7Z3S7 1137 aa20.6■□□□□ 0.89
CLSTN1-202ENST00000377298 MPHOSPH6Q99547 160 aaKnown RBP20.6■□□□□ 0.89
CLSTN1-202ENST00000377298 SPA17Q15506 151 aa20.59■□□□□ 0.89
CLSTN1-202ENST00000377298 MAGEB6Q8N7X4 407 aa20.59■□□□□ 0.89
CLSTN1-202ENST00000377298 TAF4BQ92750 862 aa20.59■□□□□ 0.89
CLSTN1-202ENST00000377298 TCEANC2Q96MN5 208 aa20.59■□□□□ 0.89
CLSTN1-202ENST00000377298 TOP1P11387 765 aaKnown RBP20.59■□□□□ 0.89
CLSTN1-202ENST00000377298 STXBP4Q6ZWJ1 553 aa20.59■□□□□ 0.89
CLSTN1-202ENST00000377298 VPS36Q86VN1 386 aa20.59■□□□□ 0.89
CLSTN1-202ENST00000377298 JDP2Q8WYK2 163 aa20.59■□□□□ 0.89
CLSTN1-202ENST00000377298 DENND2AQ9ULE3 1009 aa20.59■□□□□ 0.89
CLSTN1-202ENST00000377298 PDE8AO60658 829 aa20.59■□□□□ 0.89
CLSTN1-202ENST00000377298 CAVIN2O95810 425 aa20.59■□□□□ 0.89
CLSTN1-202ENST00000377298 GCC2Q8IWJ2 1684 aa20.59■□□□□ 0.89
CLSTN1-202ENST00000377298 STX1AQ16623 288 aa20.59■□□□□ 0.89
CLSTN1-202ENST00000377298 MLH3Q9UHC1 1453 aa20.58■□□□□ 0.89
CLSTN1-202ENST00000377298 KIF2AO00139 706 aaPredicted RBP20.58■□□□□ 0.89
CLSTN1-202ENST00000377298 IDEP14735 1019 aa20.58■□□□□ 0.89
CLSTN1-202ENST00000377298 ERLIN1O75477 346 aa20.58■□□□□ 0.89
CLSTN1-202ENST00000377298 PRIM1P49642 420 aaKnown RBP20.58■□□□□ 0.89
CLSTN1-202ENST00000377298 ZSCAN30Q86W11 494 aa20.58■□□□□ 0.89
CLSTN1-202ENST00000377298 CCDC87Q9NVE4 849 aa20.58■□□□□ 0.89
CLSTN1-202ENST00000377298 SNX21Q969T3 373 aa20.58■□□□□ 0.88
CLSTN1-202ENST00000377298 PLEKHG1Q9ULL1 1385 aa20.58■□□□□ 0.88
CLSTN1-202ENST00000377298 ERVV-2B6SEH9 535 aa20.57■□□□□ 0.88
CLSTN1-202ENST00000377298 ZSCAN12O43309 604 aa20.57■□□□□ 0.88
CLSTN1-202ENST00000377298 MCM9Q9NXL9 1143 aa20.57■□□□□ 0.88
CLSTN1-202ENST00000377298 RTL9Q8NET4 1388 aa20.57■□□□□ 0.88
CLSTN1-202ENST00000377298 ITGA6P23229 1130 aa20.57■□□□□ 0.88
CLSTN1-202ENST00000377298 CCDC171Q6TFL3 1326 aa20.57■□□□□ 0.88
CLSTN1-202ENST00000377298 PPFIA3O75145 1194 aa20.57■□□□□ 0.88
CLSTN1-202ENST00000377298 KCNG4Q8TDN1 519 aa20.57■□□□□ 0.88
CLSTN1-202ENST00000377298 EFCAB6Q5THR3 1501 aa20.57■□□□□ 0.88
CLSTN1-202ENST00000377298 CHMLP26374 656 aa20.56■□□□□ 0.88
CLSTN1-202ENST00000377298 ERMNQ8TAM6 284 aa20.56■□□□□ 0.88
CLSTN1-202ENST00000377298 DDX17Q92841 729 aaKnown RBP20.56■□□□□ 0.88
CLSTN1-202ENST00000377298 HELLSQ9NRZ9 838 aa20.56■□□□□ 0.88
CLSTN1-202ENST00000377298 STK32BQ9NY57 414 aa20.56■□□□□ 0.88
CLSTN1-202ENST00000377298 CETN1Q12798 172 aa20.56■□□□□ 0.88
CLSTN1-202ENST00000377298 FAM98CQ17RN3 349 aaKnown RBP20.56■□□□□ 0.88
CLSTN1-202ENST00000377298 A1BGP04217 495 aa20.56■□□□□ 0.88
CLSTN1-202ENST00000377298 CREB3L3Q68CJ9 461 aa20.56■□□□□ 0.88
CLSTN1-202ENST00000377298 PKNOX2Q96KN3 472 aa20.56■□□□□ 0.88
CLSTN1-202ENST00000377298 KAT6BQ8WYB5 2073 aa20.56■□□□□ 0.88
CLSTN1-202ENST00000377298 CETN2P41208 172 aa20.55■□□□□ 0.88
CLSTN1-202ENST00000377298 PUM3Q15397 648 aaKnown RBP20.55■□□□□ 0.88
CLSTN1-202ENST00000377298 MIGA1Q8NAN2 632 aa20.55■□□□□ 0.88
CLSTN1-202ENST00000377298 UQCRHLA0A096LP55 91 aa20.55■□□□□ 0.88
CLSTN1-202ENST00000377298 UQCRHP07919 91 aa20.55■□□□□ 0.88
CLSTN1-202ENST00000377298 JAKMIP3Q5VZ66 844 aa20.55■□□□□ 0.88
CLSTN1-202ENST00000377298 USP19O94966 1318 aa20.55■□□□□ 0.88
CLSTN1-202ENST00000377298 A0A1B0GUL7 405 aa20.55■□□□□ 0.88
CLSTN1-202ENST00000377298 PANK2Q9BZ23 570 aa20.55■□□□□ 0.88
CLSTN1-202ENST00000377298 KIAA0232Q92628 1395 aa20.55■□□□□ 0.88
CLSTN1-202ENST00000377298 GOLGA6L10A6NI86 522 aa20.54■□□□□ 0.88
CLSTN1-202ENST00000377298 EIF4A1P60842 406 aaKnown RBP20.54■□□□□ 0.88
CLSTN1-202ENST00000377298 DHX32Q7L7V1 743 aaKnown RBP20.54■□□□□ 0.88
CLSTN1-202ENST00000377298 ZNF496Q96IT1 587 aaPredicted RBP20.54■□□□□ 0.88
CLSTN1-202ENST00000377298 SAMM50Q9Y512 469 aa20.54■□□□□ 0.88
CLSTN1-202ENST00000377298 PATL2C9JE40 543 aaKnown RBP20.54■□□□□ 0.88
CLSTN1-202ENST00000377298 HEATR3Q7Z4Q2 680 aa20.54■□□□□ 0.88
CLSTN1-202ENST00000377298 DNAJC10Q8IXB1 793 aa20.54■□□□□ 0.88
CLSTN1-202ENST00000377298 KLHL40Q2TBA0 621 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms