RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 NUTM1Q86Y26 1132 aa17.57■□□□□ 0.4
UBA1-202ENST00000377269 PIBF1Q8WXW3 757 aa17.57■□□□□ 0.4
UBA1-202ENST00000377269 ZNF652Q9Y2D9 606 aa17.57■□□□□ 0.4
UBA1-202ENST00000377269 NUP98P52948 1817 aa17.57■□□□□ 0.4
UBA1-202ENST00000377269 USP42Q9H9J4 1324 aaKnown RBP17.57■□□□□ 0.4
UBA1-202ENST00000377269 SURF6O75683 361 aaKnown RBP17.57■□□□□ 0.4
UBA1-202ENST00000377269 TNS1Q9HBL0 1735 aaKnown RBP17.56■□□□□ 0.4
UBA1-202ENST00000377269 MBD3O95983 291 aa17.56■□□□□ 0.4
UBA1-202ENST00000377269 ATP2B3Q16720 1220 aa17.56■□□□□ 0.4
UBA1-202ENST00000377269 RABL6Q3YEC7 729 aaPredicted RBP17.56■□□□□ 0.4
UBA1-202ENST00000377269 AKT1S1Q96B36 256 aa17.56■□□□□ 0.4
UBA1-202ENST00000377269 HDAC5Q9UQL6 1122 aa17.56■□□□□ 0.4
UBA1-202ENST00000377269 CHMP3Q9Y3E7 222 aa17.56■□□□□ 0.4
UBA1-202ENST00000377269 PTMAP06454 111 aaKnown RBP17.56■□□□□ 0.4
UBA1-202ENST00000377269 C16orf71Q8IYS4 520 aaPredicted RBP17.56■□□□□ 0.4
UBA1-202ENST00000377269 HCLS1P14317 486 aaPredicted RBP17.55■□□□□ 0.4
UBA1-202ENST00000377269 IRS4O14654 1257 aaPredicted RBP17.55■□□□□ 0.4
UBA1-202ENST00000377269 DNTTIP2Q5QJE6 756 aaKnown RBP17.55■□□□□ 0.4
UBA1-202ENST00000377269 SIL1Q9H173 461 aa17.55■□□□□ 0.4
UBA1-202ENST00000377269 NTSR2O95665 410 aa17.54■□□□□ 0.4
UBA1-202ENST00000377269 GTF2E1P29083 439 aaPredicted RBP17.54■□□□□ 0.4
UBA1-202ENST00000377269 CCDC24Q8N4L8 307 aa17.54■□□□□ 0.4
UBA1-202ENST00000377269 BBXQ8WY36 941 aaPredicted RBP17.54■□□□□ 0.4
UBA1-202ENST00000377269 TSC1Q92574 1164 aa17.54■□□□□ 0.4
UBA1-202ENST00000377269 UTP14AQ9BVJ6 771 aaKnown RBP17.54■□□□□ 0.4
UBA1-202ENST00000377269 NSFL1CQ9UNZ2 370 aaKnown RBP17.54■□□□□ 0.4
UBA1-202ENST00000377269 NOLC1Q14978 699 aaKnown RBP eCLIP17.54■□□□□ 0.4
UBA1-202ENST00000377269 OTUD7AQ8TE49 926 aaPredicted RBP17.54■□□□□ 0.4
UBA1-202ENST00000377269 KIF3AQ9Y496 699 aa17.54■□□□□ 0.4
UBA1-202ENST00000377269 AK9Q5TCS8 1911 aa17.53■□□□□ 0.4
UBA1-202ENST00000377269 ADRA2BP18089 450 aa17.53■□□□□ 0.4
UBA1-202ENST00000377269 RFX5P48382 616 aaPredicted RBP17.53■□□□□ 0.4
UBA1-202ENST00000377269 SF3B2Q13435 895 aaKnown RBP17.53■□□□□ 0.4
UBA1-202ENST00000377269 PARP10Q53GL7 1025 aa17.53■□□□□ 0.4
UBA1-202ENST00000377269 GYS1P13807 737 aa17.53■□□□□ 0.4
UBA1-202ENST00000377269 COL23A1Q86Y22 540 aaPredicted RBP17.53■□□□□ 0.4
UBA1-202ENST00000377269 RNF214Q8ND24 703 aa17.53■□□□□ 0.4
UBA1-202ENST00000377269 USP26Q9BXU7 913 aa17.53■□□□□ 0.4
UBA1-202ENST00000377269 TSPY26PQ9H489 355 aa17.53■□□□□ 0.4
UBA1-202ENST00000377269 SPTLC3Q9NUV7 552 aa17.53■□□□□ 0.4
UBA1-202ENST00000377269 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.53■□□□□ 0.4
UBA1-202ENST00000377269 GOLGB1Q14789 3259 aaKnown RBP17.52■□□□□ 0.4
UBA1-202ENST00000377269 SH3TC1Q8TE82 1336 aa17.52■□□□□ 0.4
UBA1-202ENST00000377269 PDE4CQ08493 712 aa17.52■□□□□ 0.4
UBA1-202ENST00000377269 ZNF594Q96JF6 807 aaPredicted RBP17.52■□□□□ 0.4
UBA1-202ENST00000377269 SETDB2Q96T68 719 aa17.52■□□□□ 0.4
UBA1-202ENST00000377269 IL1RAPL2Q9NP60 686 aa17.52■□□□□ 0.4
UBA1-202ENST00000377269 PTPN12Q05209 780 aaKnown RBP17.52■□□□□ 0.39
UBA1-202ENST00000377269 NFIXQ14938 502 aa17.52■□□□□ 0.39
UBA1-202ENST00000377269 TAF3Q5VWG9 929 aa17.52■□□□□ 0.39
UBA1-202ENST00000377269 ZGPATQ8N5A5 531 aaKnown RBP17.52■□□□□ 0.39
UBA1-202ENST00000377269 UBR3Q6ZT12 1888 aa17.51■□□□□ 0.39
UBA1-202ENST00000377269 ERFEQ4G0M1 354 aa17.51■□□□□ 0.39
UBA1-202ENST00000377269 CDHR2Q9BYE9 1310 aa17.51■□□□□ 0.39
UBA1-202ENST00000377269 BAG6P46379 1132 aa17.5■□□□□ 0.39
UBA1-202ENST00000377269 TTLL11Q8NHH1 800 aa17.5■□□□□ 0.39
UBA1-202ENST00000377269 PLA2G12BQ9BX93 195 aa17.5■□□□□ 0.39
UBA1-202ENST00000377269 GSPT1P15170 499 aaKnown RBP17.5■□□□□ 0.39
UBA1-202ENST00000377269 LRRCC1Q9C099 1032 aa17.5■□□□□ 0.39
UBA1-202ENST00000377269 GREM2Q9H772 168 aa17.5■□□□□ 0.39
UBA1-202ENST00000377269 ANKRD36CQ5JPF3 1778 aa17.5■□□□□ 0.39
UBA1-202ENST00000377269 BCORQ6W2J9 1755 aa17.5■□□□□ 0.39
UBA1-202ENST00000377269 CSF1RP07333 972 aa17.49■□□□□ 0.39
UBA1-202ENST00000377269 OS9Q13438 667 aaPredicted RBP17.49■□□□□ 0.39
UBA1-202ENST00000377269 UVSSAQ2YD98 709 aa17.49■□□□□ 0.39
UBA1-202ENST00000377269 C3orf67Q6ZVT6 689 aa17.49■□□□□ 0.39
UBA1-202ENST00000377269 C4AP0C0L4 1744 aa17.49■□□□□ 0.39
UBA1-202ENST00000377269 ST18O60284 1047 aa17.49■□□□□ 0.39
UBA1-202ENST00000377269 CTSWP56202 376 aa17.49■□□□□ 0.39
UBA1-202ENST00000377269 NBPF5PQ86XG9 351 aaPredicted RBP17.49■□□□□ 0.39
UBA1-202ENST00000377269 RHPN1Q8TCX5 695 aa17.49■□□□□ 0.39
UBA1-202ENST00000377269 PNPLA7Q6ZV29 1317 aa17.49■□□□□ 0.39
UBA1-202ENST00000377269 SCN7AQ01118 1682 aa17.49■□□□□ 0.39
UBA1-202ENST00000377269 PDE8AO60658 829 aa17.48■□□□□ 0.39
UBA1-202ENST00000377269 SASH1O94885 1247 aa17.48■□□□□ 0.39
UBA1-202ENST00000377269 FAM184AQ8NB25 1140 aa17.48■□□□□ 0.39
UBA1-202ENST00000377269 COPRSQ9NQ92 184 aa17.48■□□□□ 0.39
UBA1-202ENST00000377269 RGL2O15211 777 aa17.47■□□□□ 0.39
UBA1-202ENST00000377269 SLC15A2Q16348 729 aa17.47■□□□□ 0.39
UBA1-202ENST00000377269 PDCL2Q8N4E4 241 aa17.47■□□□□ 0.39
UBA1-202ENST00000377269 PDGFDQ9GZP0 370 aaPredicted RBP17.47■□□□□ 0.39
UBA1-202ENST00000377269 ABCC12Q96J65 1359 aa17.47■□□□□ 0.39
UBA1-202ENST00000377269 TSHZ3Q63HK5 1081 aa17.47■□□□□ 0.39
UBA1-202ENST00000377269 ANKRD7Q92527 254 aa17.47■□□□□ 0.39
UBA1-202ENST00000377269 SYAP1Q96A49 352 aaPredicted RBP17.47■□□□□ 0.39
UBA1-202ENST00000377269 PUS3Q9BZE2 481 aaKnown RBP17.47■□□□□ 0.39
UBA1-202ENST00000377269 G3BP1Q13283 466 aaKnown RBP eCLIP17.46■□□□□ 0.392e-7■□□□□ 10.9
UBA1-202ENST00000377269 CCDC57Q2TAC2 916 aa17.46■□□□□ 0.39
UBA1-202ENST00000377269 LRRC24Q50LG9 513 aa17.46■□□□□ 0.39
UBA1-202ENST00000377269 TMEM51Q9NW97 253 aa17.46■□□□□ 0.39
UBA1-202ENST00000377269 ITGA6P23229 1130 aa17.46■□□□□ 0.39
UBA1-202ENST00000377269 MSL1Q68DK7 614 aa17.46■□□□□ 0.39
UBA1-202ENST00000377269 PLEKHM2Q8IWE5 1019 aa17.46■□□□□ 0.39
UBA1-202ENST00000377269 CHAMP1Q96JM3 812 aa17.46■□□□□ 0.39
UBA1-202ENST00000377269 SRCAPQ6ZRS2 3230 aa17.45■□□□□ 0.38
UBA1-202ENST00000377269 RAB11FIP3O75154 756 aa17.45■□□□□ 0.38
UBA1-202ENST00000377269 IFIT5Q13325 482 aaKnown RBP17.45■□□□□ 0.38
UBA1-202ENST00000377269 KIF1BPQ96EK5 621 aa17.45■□□□□ 0.38
UBA1-202ENST00000377269 SEC31BQ9NQW1 1179 aa17.45■□□□□ 0.38
UBA1-202ENST00000377269 TM4SF1P30408 202 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms