RNA–Protein interactions for RNA: ENST00000376893.7

SSX3-202, Transcript of SSX family member 3, humanhuman

TSL 2 BASIC

Gene SSX3, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-202ENST00000376893 TCEAL1Q15170 157 aa8.17□□□□□ -1.1
SSX3-202ENST00000376893 MTFR1Q15390 333 aa8.17□□□□□ -1.1
SSX3-202ENST00000376893 CCDC181Q5TID7 509 aa8.17□□□□□ -1.1
SSX3-202ENST00000376893 BAP1Q92560 729 aa8.17□□□□□ -1.1
SSX3-202ENST00000376893 MARVELD3Q96A59 401 aa8.17□□□□□ -1.1
SSX3-202ENST00000376893 SETDB2Q96T68 719 aa8.17□□□□□ -1.1
SSX3-202ENST00000376893 QTRT2Q9H974 415 aaKnown RBP8.17□□□□□ -1.1
SSX3-202ENST00000376893 SCHIP1Q9P0W5 487 aaPredicted RBP8.17□□□□□ -1.1
SSX3-202ENST00000376893 NOP58Q9Y2X3 529 aaKnown RBP8.17□□□□□ -1.1
SSX3-202ENST00000376893 USP31Q70CQ4 1352 aa8.17□□□□□ -1.1
SSX3-202ENST00000376893 SETD5Q9C0A6 1442 aa8.17□□□□□ -1.1
SSX3-202ENST00000376893 PTPRTO14522 1441 aa8.16□□□□□ -1.1
SSX3-202ENST00000376893 ENPP3O14638 875 aa8.16□□□□□ -1.1
SSX3-202ENST00000376893 NPHP4O75161 1426 aaPredicted RBP8.16□□□□□ -1.1
SSX3-202ENST00000376893 EIF4BP23588 611 aaKnown RBP8.16□□□□□ -1.1
SSX3-202ENST00000376893 ST13P50502 369 aaKnown RBP8.16□□□□□ -1.1
SSX3-202ENST00000376893 HIRAP54198 1017 aaPredicted RBP8.16□□□□□ -1.1
SSX3-202ENST00000376893 ZNF394Q53GI3 561 aa8.16□□□□□ -1.1
SSX3-202ENST00000376893 RNF187Q5TA31 235 aaPredicted RBP8.16□□□□□ -1.1
SSX3-202ENST00000376893 JAZF1Q86VZ6 243 aa8.16□□□□□ -1.1
SSX3-202ENST00000376893 KCTD15Q96SI1 283 aaPredicted RBP8.16□□□□□ -1.1
SSX3-202ENST00000376893 LTBP4Q8N2S1 1624 aa8.15□□□□□ -1.1
SSX3-202ENST00000376893 ZFYVE9O95405 1425 aa8.15□□□□□ -1.1
SSX3-202ENST00000376893 FAM205CA6NFA0 338 aa8.15□□□□□ -1.1
SSX3-202ENST00000376893 SCTRP47872 440 aa8.15□□□□□ -1.1
SSX3-202ENST00000376893 RASGRP4Q8TDF6 673 aa8.15□□□□□ -1.1
SSX3-202ENST00000376893 MRFAP1L1Q96HT8 127 aa8.15□□□□□ -1.1
SSX3-202ENST00000376893 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.15□□□□□ -1.14e-6■■□□□ 12.7
SSX3-202ENST00000376893 OSBPL3Q9H4L5 887 aa8.15□□□□□ -1.1
SSX3-202ENST00000376893 POLIQ9UNA4 740 aa8.15□□□□□ -1.1
SSX3-202ENST00000376893 SETD1BQ9UPS6 1966 aaKnown RBP8.15□□□□□ -1.11
SSX3-202ENST00000376893 MED14O60244 1454 aa8.14□□□□□ -1.11
SSX3-202ENST00000376893 TMEM2Q9UHN6 1383 aa8.14□□□□□ -1.11
SSX3-202ENST00000376893 POTEB3A0JP26 581 aa8.14□□□□□ -1.11
SSX3-202ENST00000376893 RPLP1P05386 114 aaKnown RBP8.14□□□□□ -1.11
SSX3-202ENST00000376893 SERINC3Q13530 473 aa8.14□□□□□ -1.11
SSX3-202ENST00000376893 ESCO1Q5FWF5 840 aa8.14□□□□□ -1.11
SSX3-202ENST00000376893 POTEBQ6S5H4 581 aa8.14□□□□□ -1.11
SSX3-202ENST00000376893 CKAP2LQ8IYA6 745 aa8.14□□□□□ -1.11
SSX3-202ENST00000376893 CCDC24Q8N4L8 307 aa8.14□□□□□ -1.11
SSX3-202ENST00000376893 LRFN2Q9ULH4 789 aa8.14□□□□□ -1.11
SSX3-202ENST00000376893 CHMP3Q9Y3E7 222 aa8.14□□□□□ -1.11
SSX3-202ENST00000376893 NEXMIFQ5QGS0 1516 aa8.13□□□□□ -1.11
SSX3-202ENST00000376893 STRCP1A6NGW2 1772 aa8.13□□□□□ -1.11
SSX3-202ENST00000376893 ZNF335Q9H4Z2 1342 aaPredicted RBP8.13□□□□□ -1.11
SSX3-202ENST00000376893 ERVH48-1M5A8F1 160 aa8.13□□□□□ -1.11
SSX3-202ENST00000376893 GNRH1P01148 92 aa8.13□□□□□ -1.11
SSX3-202ENST00000376893 PDGFAP04085 211 aa8.13□□□□□ -1.11
SSX3-202ENST00000376893 PCSK2P16519 638 aa8.13□□□□□ -1.11
SSX3-202ENST00000376893 IDI1Q13907 227 aa8.13□□□□□ -1.11
SSX3-202ENST00000376893 INTS6LQ5JSJ4 861 aaKnown RBP8.13□□□□□ -1.11
SSX3-202ENST00000376893 ADGRD1Q6QNK2 874 aa8.13□□□□□ -1.11
SSX3-202ENST00000376893 SLC9A9Q8IVB4 645 aa8.13□□□□□ -1.11
SSX3-202ENST00000376893 SEC16BQ96JE7 1060 aa8.13□□□□□ -1.11
SSX3-202ENST00000376893 ETNK1Q9HBU6 452 aa8.13□□□□□ -1.11
SSX3-202ENST00000376893 PCDHGB7Q9Y5F8 929 aa8.13□□□□□ -1.11
SSX3-202ENST00000376893 NRXN3Q9Y4C0 1643 aa8.13□□□□□ -1.11
SSX3-202ENST00000376893 RIMS2Q9UQ26 1411 aa8.12□□□□□ -1.11
SSX3-202ENST00000376893 A6NJY4 79 aa8.12□□□□□ -1.11
SSX3-202ENST00000376893 EIF1AYO14602 144 aaKnown RBP8.12□□□□□ -1.11
SSX3-202ENST00000376893 ZBTB39O15060 712 aa8.12□□□□□ -1.11
SSX3-202ENST00000376893 HRO43593 1189 aa8.12□□□□□ -1.11
SSX3-202ENST00000376893 ANAPC15P60006 121 aa8.12□□□□□ -1.11
SSX3-202ENST00000376893 BMS1Q14692 1282 aaKnown RBP8.12□□□□□ -1.11
SSX3-202ENST00000376893 GPRASP2Q96D09 838 aa8.12□□□□□ -1.11
SSX3-202ENST00000376893 GGT7Q9UJ14 662 aa8.12□□□□□ -1.11
SSX3-202ENST00000376893 NWD1Q149M9 1564 aa8.11□□□□□ -1.11
SSX3-202ENST00000376893 SMTNP53814 917 aa8.11□□□□□ -1.11
SSX3-202ENST00000376893 WNT7BP56706 349 aa8.11□□□□□ -1.11
SSX3-202ENST00000376893 LSM11P83369 360 aaKnown RBP eCLIP8.11□□□□□ -1.11
SSX3-202ENST00000376893 CYP2U1Q7Z449 544 aa8.11□□□□□ -1.11
SSX3-202ENST00000376893 CERS3Q8IU89 383 aa8.11□□□□□ -1.11
SSX3-202ENST00000376893 HS3ST6Q96QI5 342 aa8.11□□□□□ -1.11
SSX3-202ENST00000376893 SRCIN1Q9C0H9 1055 aa8.11□□□□□ -1.11
SSX3-202ENST00000376893 C12orf49Q9H741 205 aa8.11□□□□□ -1.11
SSX3-202ENST00000376893 POTECB2RU33 542 aa8.1□□□□□ -1.11
SSX3-202ENST00000376893 K7ELQ4 463 aaPredicted RBP8.1□□□□□ -1.11
SSX3-202ENST00000376893 CDK2AP1O14519 115 aa8.1□□□□□ -1.11
SSX3-202ENST00000376893 ZPR1O75312 459 aa8.1□□□□□ -1.11
SSX3-202ENST00000376893 LTKP29376 864 aa8.1□□□□□ -1.11
SSX3-202ENST00000376893 DHX9Q08211 1270 aaKnown RBP8.1□□□□□ -1.11
SSX3-202ENST00000376893 TAF1CQ15572 869 aaPredicted RBP8.1□□□□□ -1.11
SSX3-202ENST00000376893 RTN1Q16799 776 aa8.1□□□□□ -1.11
SSX3-202ENST00000376893 C11orf91Q3C1V1 193 aa8.1□□□□□ -1.11
SSX3-202ENST00000376893 LINC01559Q495D7 138 aa8.1□□□□□ -1.11
SSX3-202ENST00000376893 ERMP1Q7Z2K6 904 aa8.1□□□□□ -1.11
SSX3-202ENST00000376893 LRP10Q7Z4F1 713 aa8.1□□□□□ -1.11
SSX3-202ENST00000376893 ATCAYQ86WG3 371 aa8.1□□□□□ -1.11
SSX3-202ENST00000376893 NBPF15Q8N660 670 aa8.1□□□□□ -1.11
SSX3-202ENST00000376893 EDEM1Q92611 657 aa8.1□□□□□ -1.11
SSX3-202ENST00000376893 FAM13BQ9NYF5 915 aa8.1□□□□□ -1.11
SSX3-202ENST00000376893 SERTAD1Q9UHV2 236 aa8.1□□□□□ -1.11
SSX3-202ENST00000376893 DMGDHQ9UI17 866 aaKnown RBP8.1□□□□□ -1.11
SSX3-202ENST00000376893 PRKAB1Q9Y478 270 aa8.1□□□□□ -1.11
SSX3-202ENST00000376893 PPME1Q9Y570 386 aa8.1□□□□□ -1.11
SSX3-202ENST00000376893 MRPL42Q9Y6G3 142 aaKnown RBP8.1□□□□□ -1.11
SSX3-202ENST00000376893 IFT172Q9UG01 1749 aa8.09□□□□□ -1.11
SSX3-202ENST00000376893 KIF1BO60333 1816 aa8.09□□□□□ -1.11
SSX3-202ENST00000376893 GOLGA8CPA6NN73 597 aa8.09□□□□□ -1.11
SSX3-202ENST00000376893 CPNE3O75131 537 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms