RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 QTRT2Q9H974 415 aaKnown RBP13.08□□□□□ -0.32
HDAC6-203ENST00000376619 IQGAP1P46940 1657 aa13.08□□□□□ -0.32
HDAC6-203ENST00000376619 ADCY5O95622 1261 aa13.07□□□□□ -0.32
HDAC6-203ENST00000376619 KRT32Q14532 448 aa13.07□□□□□ -0.32
HDAC6-203ENST00000376619 MAP3K11Q16584 847 aa13.07□□□□□ -0.32
HDAC6-203ENST00000376619 CDC37L1Q7L3B6 337 aa13.07□□□□□ -0.32
HDAC6-203ENST00000376619 ITGA6P23229 1130 aa13.07□□□□□ -0.32
HDAC6-203ENST00000376619 ZAP70P43403 619 aa13.07□□□□□ -0.32
HDAC6-203ENST00000376619 CMTR1Q8N1G2 835 aaKnown RBP13.07□□□□□ -0.32
HDAC6-203ENST00000376619 ANKIB1Q9P2G1 1089 aa13.07□□□□□ -0.32
HDAC6-203ENST00000376619 SF3B2Q13435 895 aaKnown RBP13.07□□□□□ -0.32
HDAC6-203ENST00000376619 FAM98CQ17RN3 349 aaKnown RBP13.07□□□□□ -0.32
HDAC6-203ENST00000376619 GPHNQ9NQX3 736 aaPredicted RBP13.07□□□□□ -0.32
HDAC6-203ENST00000376619 DHX8Q14562 1220 aaKnown RBP13.06□□□□□ -0.32
HDAC6-203ENST00000376619 UBAC1Q9BSL1 405 aa13.06□□□□□ -0.32
HDAC6-203ENST00000376619 AKAP2Q9Y2D5 859 aa13.06□□□□□ -0.32
HDAC6-203ENST00000376619 CPSF1Q10570 1443 aaKnown RBP13.06□□□□□ -0.32
HDAC6-203ENST00000376619 RAD50Q92878 1312 aa13.06□□□□□ -0.32
HDAC6-203ENST00000376619 HSPA4P34932 840 aa13.06□□□□□ -0.32
HDAC6-203ENST00000376619 KLHL10Q6JEL2 608 aa13.06□□□□□ -0.32
HDAC6-203ENST00000376619 GPT2Q8TD30 523 aa13.06□□□□□ -0.32
HDAC6-203ENST00000376619 TMX1Q9H3N1 280 aa13.06□□□□□ -0.32
HDAC6-203ENST00000376619 TRMT1Q9NXH9 659 aaKnown RBP13.06□□□□□ -0.32
HDAC6-203ENST00000376619 TPCN1Q9ULQ1 816 aa13.06□□□□□ -0.32
HDAC6-203ENST00000376619 ZSCAN30Q86W11 494 aa13.06□□□□□ -0.32
HDAC6-203ENST00000376619 PLBD2Q8NHP8 589 aa13.06□□□□□ -0.32
HDAC6-203ENST00000376619 SH2B1Q9NRF2 756 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-203ENST00000376619 IL15P40933 162 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-203ENST00000376619 FSIP1Q8NA03 581 aa13.06□□□□□ -0.32
HDAC6-203ENST00000376619 XAGE2Q96GT9 111 aa13.06□□□□□ -0.32
HDAC6-203ENST00000376619 TMX4Q9H1E5 349 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-203ENST00000376619 CCDC39Q9UFE4 941 aa13.06□□□□□ -0.32
HDAC6-203ENST00000376619 F8W031 263 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-203ENST00000376619 EYA2O00167 538 aa13.05□□□□□ -0.32
HDAC6-203ENST00000376619 SART3Q15020 963 aaKnown RBP13.05□□□□□ -0.32
HDAC6-203ENST00000376619 CCDC183Q5T5S1 534 aa13.05□□□□□ -0.32
HDAC6-203ENST00000376619 FTOQ9C0B1 505 aaKnown RBP eCLIP13.05□□□□□ -0.32
HDAC6-203ENST00000376619 DNAJC25Q9H1X3 360 aa13.05□□□□□ -0.32
HDAC6-203ENST00000376619 C1orf167Q5SNV9 1468 aa13.05□□□□□ -0.32
HDAC6-203ENST00000376619 CDK12Q9NYV4 1490 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-203ENST00000376619 TTC41PQ6P2S7 1318 aa13.05□□□□□ -0.32
HDAC6-203ENST00000376619 TPM4P67936 248 aa13.05□□□□□ -0.32
HDAC6-203ENST00000376619 LUZP1Q86V48 1076 aa13.05□□□□□ -0.32
HDAC6-203ENST00000376619 CTNNA3Q9UI47 895 aa13.05□□□□□ -0.32
HDAC6-203ENST00000376619 ANAPC15P60006 121 aa13.04□□□□□ -0.32
HDAC6-203ENST00000376619 NOL10Q9BSC4 688 aaKnown RBP13.04□□□□□ -0.32
HDAC6-203ENST00000376619 SLC26A6Q9BXS9 759 aa13.04□□□□□ -0.32
HDAC6-203ENST00000376619 ZBTB1Q9Y2K1 713 aa13.04□□□□□ -0.32
HDAC6-203ENST00000376619 TAF6LQ9Y6J9 622 aa13.04□□□□□ -0.32
HDAC6-203ENST00000376619 SPECC1Q5M775 1068 aa13.04□□□□□ -0.32
HDAC6-203ENST00000376619 MAGEB6Q8N7X4 407 aa13.04□□□□□ -0.32
HDAC6-203ENST00000376619 NACAP1Q9BZK3 213 aa13.04□□□□□ -0.32
HDAC6-203ENST00000376619 GJB4Q9NTQ9 266 aa13.04□□□□□ -0.32
HDAC6-203ENST00000376619 B4E1Z4 1266 aa13.04□□□□□ -0.32
HDAC6-203ENST00000376619 ZPR1O75312 459 aa13.04□□□□□ -0.32
HDAC6-203ENST00000376619 TMEM67Q5HYA8 995 aa13.04□□□□□ -0.32
HDAC6-203ENST00000376619 LRSAM1Q6UWE0 723 aa13.04□□□□□ -0.32
HDAC6-203ENST00000376619 PI4K2BQ8TCG2 481 aa13.04□□□□□ -0.32
HDAC6-203ENST00000376619 AFF2P51816 1311 aa13.04□□□□□ -0.32
HDAC6-203ENST00000376619 PRC1O43663 620 aa13.03□□□□□ -0.32
HDAC6-203ENST00000376619 VAT1LQ9HCJ6 419 aa13.03□□□□□ -0.32
HDAC6-203ENST00000376619 CD163L1Q9NR16 1453 aa13.03□□□□□ -0.32
HDAC6-203ENST00000376619 MAP3K12Q12852 859 aa13.03□□□□□ -0.32
HDAC6-203ENST00000376619 PHKBQ93100 1093 aa13.03□□□□□ -0.32
HDAC6-203ENST00000376619 ZNF165P49910 485 aa13.03□□□□□ -0.32
HDAC6-203ENST00000376619 NCBP3Q53F19 620 aaKnown RBP13.03□□□□□ -0.32
HDAC6-203ENST00000376619 JCADQ9P266 1359 aa13.03□□□□□ -0.32
HDAC6-203ENST00000376619 PTPDC1A2A3K4 754 aa13.02□□□□□ -0.32
HDAC6-203ENST00000376619 UBE2HP62256 183 aa13.02□□□□□ -0.32
HDAC6-203ENST00000376619 TRMT1LQ7Z2T5 733 aaKnown RBP13.02□□□□□ -0.32
HDAC6-203ENST00000376619 CCAR1Q8IX12 1150 aaKnown RBP13.02□□□□□ -0.32
HDAC6-203ENST00000376619 GREM2Q9H772 168 aa13.02□□□□□ -0.32
HDAC6-203ENST00000376619 CFAP45Q9UL16 551 aa13.02□□□□□ -0.32
HDAC6-203ENST00000376619 ZNF396Q96N95 335 aaPredicted RBP13.02□□□□□ -0.32
HDAC6-203ENST00000376619 LSG1Q9H089 658 aaKnown RBP13.02□□□□□ -0.32
HDAC6-203ENST00000376619 TFCP2L1Q9NZI6 479 aa13.02□□□□□ -0.32
HDAC6-203ENST00000376619 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.02□□□□□ -0.32
HDAC6-203ENST00000376619 MED14O60244 1454 aa13.02□□□□□ -0.33
HDAC6-203ENST00000376619 A0A1B0GVL5 298 aa13.02□□□□□ -0.33
HDAC6-203ENST00000376619 CYP7A1P22680 504 aa13.02□□□□□ -0.33
HDAC6-203ENST00000376619 TSC1Q92574 1164 aa13.02□□□□□ -0.33
HDAC6-203ENST00000376619 C16orf45Q96MC5 204 aaPredicted RBP13.02□□□□□ -0.33
HDAC6-203ENST00000376619 INCENPQ9NQS7 918 aa13.02□□□□□ -0.33
HDAC6-203ENST00000376619 GOLGA8AA7E2F4 631 aa13.02□□□□□ -0.33
HDAC6-203ENST00000376619 IKQ13123 557 aaPredicted RBP13.02□□□□□ -0.33
HDAC6-203ENST00000376619 ANO6Q4KMQ2 910 aa13.02□□□□□ -0.33
HDAC6-203ENST00000376619 UIMC1Q96RL1 719 aa13.02□□□□□ -0.33
HDAC6-203ENST00000376619 ARMT1Q9H993 441 aa13.02□□□□□ -0.33
HDAC6-203ENST00000376619 SLC12A7Q9Y666 1083 aa13.02□□□□□ -0.33
HDAC6-203ENST00000376619 PCDH11XQ9BZA7 1347 aa13.02□□□□□ -0.33
HDAC6-203ENST00000376619 PCDH11YQ9BZA8 1340 aa13.02□□□□□ -0.33
HDAC6-203ENST00000376619 SERPINC1P01008 464 aa13.01□□□□□ -0.33
HDAC6-203ENST00000376619 PTPN12Q05209 780 aaKnown RBP13.01□□□□□ -0.33
HDAC6-203ENST00000376619 SCAND2PQ9GZW5 306 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-203ENST00000376619 RBM5P52756 815 aaKnown RBP eCLIP13.01□□□□□ -0.33
HDAC6-203ENST00000376619 HLFQ16534 295 aa13.01□□□□□ -0.33
HDAC6-203ENST00000376619 TRIM22Q8IYM9 498 aa13.01□□□□□ -0.33
HDAC6-203ENST00000376619 PCMTD1Q96MG8 357 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-203ENST00000376619 SEC31BQ9NQW1 1179 aa13.01□□□□□ -0.33
HDAC6-203ENST00000376619 SLC4A4Q9Y6R1 1079 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms