RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 RC3H1Q5TC82 1133 aaKnown RBP15.24■□□□□ 0.03
CLCN6-206ENST00000376496 TAF1P21675 1872 aa15.24■□□□□ 0.03
CLCN6-206ENST00000376496 K7ELQ4 463 aaPredicted RBP15.23■□□□□ 0.03
CLCN6-206ENST00000376496 EIF5BO60841 1220 aaKnown RBP15.23■□□□□ 0.03
CLCN6-206ENST00000376496 AK7Q96M32 723 aa15.23■□□□□ 0.03
CLCN6-206ENST00000376496 RAD50Q92878 1312 aa15.23■□□□□ 0.03
CLCN6-206ENST00000376496 WTIPA6NIX2 430 aaPredicted RBP15.23■□□□□ 0.03
CLCN6-206ENST00000376496 CLEC4GQ6UXB4 293 aa15.23■□□□□ 0.03
CLCN6-206ENST00000376496 ABCC12Q96J65 1359 aa15.23■□□□□ 0.03
CLCN6-206ENST00000376496 ZNF831Q5JPB2 1677 aa15.23■□□□□ 0.03
CLCN6-206ENST00000376496 TAF1LQ8IZX4 1826 aa15.23■□□□□ 0.03
CLCN6-206ENST00000376496 LY75O60449 1722 aa15.23■□□□□ 0.03
CLCN6-206ENST00000376496 CPA1P15085 419 aa15.23■□□□□ 0.03
CLCN6-206ENST00000376496 MCCP23508 829 aa15.23■□□□□ 0.03
CLCN6-206ENST00000376496 TTC39AQ5SRH9 613 aa15.23■□□□□ 0.03
CLCN6-206ENST00000376496 PAG1Q9NWQ8 432 aa15.23■□□□□ 0.03
CLCN6-206ENST00000376496 HSPA4P34932 840 aa15.22■□□□□ 0.03
CLCN6-206ENST00000376496 VGLL2Q8N8G2 317 aa15.22■□□□□ 0.03
CLCN6-206ENST00000376496 RUFY2Q8WXA3 655 aa15.22■□□□□ 0.03
CLCN6-206ENST00000376496 SPEF2Q9C093 1822 aa15.22■□□□□ 0.03
CLCN6-206ENST00000376496 HSP90AA1P07900 732 aaKnown RBP15.22■□□□□ 0.03
CLCN6-206ENST00000376496 RFC4P35249 363 aa15.22■□□□□ 0.03
CLCN6-206ENST00000376496 PRPF40BQ6NWY9 871 aaKnown RBP15.22■□□□□ 0.03
CLCN6-206ENST00000376496 SETDB2Q96T68 719 aa15.22■□□□□ 0.03
CLCN6-206ENST00000376496 MPHOSPH8Q99549 860 aa15.22■□□□□ 0.03
CLCN6-206ENST00000376496 LARP6Q9BRS8 491 aaKnown RBP15.22■□□□□ 0.03
CLCN6-206ENST00000376496 AKAP2Q9Y2D5 859 aa15.22■□□□□ 0.03
CLCN6-206ENST00000376496 COL9A3Q14050 684 aaPredicted RBP15.21■□□□□ 0.03
CLCN6-206ENST00000376496 CCDC152Q4G0S7 254 aa15.21■□□□□ 0.03
CLCN6-206ENST00000376496 SNX14Q9Y5W7 946 aa15.21■□□□□ 0.03
CLCN6-206ENST00000376496 C4BP0C0L5 1744 aa15.21■□□□□ 0.03
CLCN6-206ENST00000376496 NFKBIBQ15653 356 aa15.21■□□□□ 0.03
CLCN6-206ENST00000376496 TRAPPC3LQ5T215 181 aa15.21■□□□□ 0.03
CLCN6-206ENST00000376496 NBPF5PQ86XG9 351 aaPredicted RBP15.21■□□□□ 0.03
CLCN6-206ENST00000376496 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.2■□□□□ 0.02
CLCN6-206ENST00000376496 FRAT2O75474 233 aaPredicted RBP15.2■□□□□ 0.02
CLCN6-206ENST00000376496 PDE8BO95263 885 aa15.2■□□□□ 0.02
CLCN6-206ENST00000376496 CCDC158Q5M9N0 1113 aa15.2■□□□□ 0.02
CLCN6-206ENST00000376496 SLC51AQ86UW1 340 aa15.2■□□□□ 0.02
CLCN6-206ENST00000376496 TAF6LQ9Y6J9 622 aa15.2■□□□□ 0.02
CLCN6-206ENST00000376496 CCDC171Q6TFL3 1326 aa15.2■□□□□ 0.02
CLCN6-206ENST00000376496 ZAP70P43403 619 aa15.2■□□□□ 0.02
CLCN6-206ENST00000376496 FBXO3Q9UK99 471 aa15.2■□□□□ 0.02
CLCN6-206ENST00000376496 KCNJ4P48050 445 aa15.2■□□□□ 0.02
CLCN6-206ENST00000376496 RBM6P78332 1123 aaKnown RBP15.2■□□□□ 0.02
CLCN6-206ENST00000376496 PROM2Q8N271 834 aa15.2■□□□□ 0.02
CLCN6-206ENST00000376496 KBTBD3Q8NAB2 608 aa15.2■□□□□ 0.02
CLCN6-206ENST00000376496 RBM8AQ9Y5S9 174 aaKnown RBP15.2■□□□□ 0.02
CLCN6-206ENST00000376496 SCN7AQ01118 1682 aa15.19■□□□□ 0.02
CLCN6-206ENST00000376496 PHKA1P46020 1223 aa15.19■□□□□ 0.02
CLCN6-206ENST00000376496 ADCK5Q3MIX3 580 aa15.19■□□□□ 0.02
CLCN6-206ENST00000376496 HIP1O00291 1037 aa15.18■□□□□ 0.02
CLCN6-206ENST00000376496 NPHP1O15259 732 aa15.18■□□□□ 0.02
CLCN6-206ENST00000376496 ST18O60284 1047 aa15.18■□□□□ 0.02
CLCN6-206ENST00000376496 MCAMP43121 646 aa15.18■□□□□ 0.02
CLCN6-206ENST00000376496 CELF1Q92879 486 aaKnown RBP15.18■□□□□ 0.02
CLCN6-206ENST00000376496 DTNBO60941 627 aa15.18■□□□□ 0.02
CLCN6-206ENST00000376496 IGHMBP2P38935 993 aaKnown RBP15.18■□□□□ 0.02
CLCN6-206ENST00000376496 MED23Q9ULK4 1368 aa15.18■□□□□ 0.02
CLCN6-206ENST00000376496 C4AP0C0L4 1744 aa15.17■□□□□ 0.02
CLCN6-206ENST00000376496 NFIXQ14938 502 aa15.17■□□□□ 0.02
CLCN6-206ENST00000376496 ZNF772Q68DY9 489 aaPredicted RBP15.17■□□□□ 0.02
CLCN6-206ENST00000376496 TXNRD1Q16881 649 aa15.17■□□□□ 0.02
CLCN6-206ENST00000376496 CHRNDQ07001 517 aa15.16■□□□□ 0.02
CLCN6-206ENST00000376496 VPS53Q5VIR6 699 aa15.16■□□□□ 0.02
CLCN6-206ENST00000376496 CCDC102BQ68D86 513 aa15.16■□□□□ 0.02
CLCN6-206ENST00000376496 ZGPATQ8N5A5 531 aaKnown RBP15.16■□□□□ 0.02
CLCN6-206ENST00000376496 IQSEC3Q9UPP2 1182 aaPredicted RBP15.16■□□□□ 0.02
CLCN6-206ENST00000376496 ANAPC15P60006 121 aa15.16■□□□□ 0.02
CLCN6-206ENST00000376496 PUM3Q15397 648 aaKnown RBP15.16■□□□□ 0.02
CLCN6-206ENST00000376496 MAP4K1Q92918 833 aa15.16■□□□□ 0.02
CLCN6-206ENST00000376496 NECTIN1Q15223 517 aa15.16■□□□□ 0.02
CLCN6-206ENST00000376496 CREB3L3Q68CJ9 461 aa15.16■□□□□ 0.02
CLCN6-206ENST00000376496 JAKMIP1Q96N16 626 aaKnown RBP15.16■□□□□ 0.02
CLCN6-206ENST00000376496 MROH5Q6ZUA9 1318 aa15.15■□□□□ 0.02
CLCN6-206ENST00000376496 A0A0G2JLW4 131 aa15.15■□□□□ 0.02
CLCN6-206ENST00000376496 CASTP20810 708 aaKnown RBP15.15■□□□□ 0.02
CLCN6-206ENST00000376496 FGFR2P21802 821 aa15.15■□□□□ 0.02
CLCN6-206ENST00000376496 TCEANC2Q96MN5 208 aa15.15■□□□□ 0.02
CLCN6-206ENST00000376496 LRP5O75197 1615 aa15.15■□□□□ 0.02
CLCN6-206ENST00000376496 CASZ1Q86V15 1759 aa15.15■□□□□ 0.02
CLCN6-206ENST00000376496 APBA3O96018 575 aa15.15■□□□□ 0.02
CLCN6-206ENST00000376496 BCAMP50895 628 aa15.15■□□□□ 0.02
CLCN6-206ENST00000376496 MCMDC2Q4G0Z9 681 aa15.15■□□□□ 0.02
CLCN6-206ENST00000376496 TPTE2Q6XPS3 522 aa15.15■□□□□ 0.02
CLCN6-206ENST00000376496 M0R2C6 588 aa15.14■□□□□ 0.01
CLCN6-206ENST00000376496 SLC27A2O14975 620 aa15.14■□□□□ 0.01
CLCN6-206ENST00000376496 ANKRD18AQ8IVF6 992 aa15.14■□□□□ 0.01
CLCN6-206ENST00000376496 LPIN2Q92539 896 aa15.14■□□□□ 0.01
CLCN6-206ENST00000376496 RGS17Q9UGC6 210 aaPredicted RBP15.14■□□□□ 0.01
CLCN6-206ENST00000376496 LAMB2P55268 1798 aa15.14■□□□□ 0.01
CLCN6-206ENST00000376496 CYP2E1P05181 493 aaPredicted RBP15.14■□□□□ 0.01
CLCN6-206ENST00000376496 RXRBP28702 533 aa15.14■□□□□ 0.01
CLCN6-206ENST00000376496 DDIT3P35638 169 aa15.14■□□□□ 0.01
CLCN6-206ENST00000376496 SF3B3Q15393 1217 aaKnown RBP15.14■□□□□ 0.01
CLCN6-206ENST00000376496 TMX3Q96JJ7 454 aa15.14■□□□□ 0.01
CLCN6-206ENST00000376496 PIH1D3Q9NQM4 214 aaKnown RBP15.14■□□□□ 0.01
CLCN6-206ENST00000376496 CHMP5Q9NZZ3 219 aa15.14■□□□□ 0.01
CLCN6-206ENST00000376496 RNF113AO15541 343 aaKnown RBP15.13■□□□□ 0.01
CLCN6-206ENST00000376496 WASHC4Q2M389 1173 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms