RNA–Protein interactions for RNA: ENST00000376230.7

ZNF550-203, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 3,719 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-203ENST00000376230 KLF18A0A0U1RQI7 1052 aa11.83□□□□□ -0.52
ZNF550-203ENST00000376230 PDCP20941 246 aa11.83□□□□□ -0.52
ZNF550-203ENST00000376230 FAM177A1Q8N128 213 aaPredicted RBP11.83□□□□□ -0.52
ZNF550-203ENST00000376230 INCENPQ9NQS7 918 aa11.83□□□□□ -0.52
ZNF550-203ENST00000376230 KINO60870 393 aaKnown RBP11.83□□□□□ -0.52
ZNF550-203ENST00000376230 MAPK8IP2Q13387 824 aaPredicted RBP11.83□□□□□ -0.52
ZNF550-203ENST00000376230 ATP2B3Q16720 1220 aa11.83□□□□□ -0.52
ZNF550-203ENST00000376230 PDILTQ8N807 584 aa11.83□□□□□ -0.52
ZNF550-203ENST00000376230 MED14O60244 1454 aa11.82□□□□□ -0.52
ZNF550-203ENST00000376230 CYP2E1P05181 493 aaPredicted RBP11.82□□□□□ -0.52
ZNF550-203ENST00000376230 HS1BP3Q53T59 392 aa11.82□□□□□ -0.52
ZNF550-203ENST00000376230 CCDC183Q5T5S1 534 aa11.82□□□□□ -0.52
ZNF550-203ENST00000376230 ATP6V1AP38606 617 aa11.82□□□□□ -0.52
ZNF550-203ENST00000376230 ZSCAN31Q96LW9 406 aaPredicted RBP11.82□□□□□ -0.52
ZNF550-203ENST00000376230 DNAJC25Q9H1X3 360 aa11.82□□□□□ -0.52
ZNF550-203ENST00000376230 SHPRHQ149N8 1683 aa11.82□□□□□ -0.52
ZNF550-203ENST00000376230 TTC41PQ6P2S7 1318 aa11.82□□□□□ -0.52
ZNF550-203ENST00000376230 ZNF213O14771 459 aa11.82□□□□□ -0.52
ZNF550-203ENST00000376230 LIG1P18858 919 aa11.82□□□□□ -0.52
ZNF550-203ENST00000376230 ANAPC15P60006 121 aa11.82□□□□□ -0.52
ZNF550-203ENST00000376230 PTPN12Q05209 780 aaKnown RBP11.82□□□□□ -0.52
ZNF550-203ENST00000376230 ZNF771Q7L3S4 317 aaPredicted RBP11.82□□□□□ -0.52
ZNF550-203ENST00000376230 PDLIM2Q96JY6 352 aa11.82□□□□□ -0.52
ZNF550-203ENST00000376230 TMX1Q9H3N1 280 aa11.82□□□□□ -0.52
ZNF550-203ENST00000376230 IRS4O14654 1257 aaPredicted RBP11.81□□□□□ -0.52
ZNF550-203ENST00000376230 PRDM1O75626 825 aa11.81□□□□□ -0.52
ZNF550-203ENST00000376230 SMC2O95347 1197 aa11.81□□□□□ -0.52
ZNF550-203ENST00000376230 CCDC192P0DO97 292 aa11.81□□□□□ -0.52
ZNF550-203ENST00000376230 PTPN21Q16825 1174 aa11.81□□□□□ -0.52
ZNF550-203ENST00000376230 CDC42BPGQ6DT37 1551 aa11.81□□□□□ -0.52
ZNF550-203ENST00000376230 OSBPL3Q9H4L5 887 aa11.81□□□□□ -0.52
ZNF550-203ENST00000376230 TRMT1Q9NXH9 659 aaKnown RBP11.81□□□□□ -0.52
ZNF550-203ENST00000376230 STAP2Q9UGK3 403 aa11.81□□□□□ -0.52
ZNF550-203ENST00000376230 NBPF26B4DH59 902 aa11.81□□□□□ -0.52
ZNF550-203ENST00000376230 TRIM29Q14134 588 aa11.81□□□□□ -0.52
ZNF550-203ENST00000376230 MAP3K11Q16584 847 aa11.81□□□□□ -0.52
ZNF550-203ENST00000376230 IMMTQ16891 758 aaKnown RBP11.81□□□□□ -0.52
ZNF550-203ENST00000376230 NBPF14Q5TI25 921 aa11.81□□□□□ -0.52
ZNF550-203ENST00000376230 NBPF10Q6P3W6 841 aaKnown RBP11.81□□□□□ -0.52
ZNF550-203ENST00000376230 DZIP3Q86Y13 1208 aaKnown RBP11.81□□□□□ -0.52
ZNF550-203ENST00000376230 PDCL2Q8N4E4 241 aa11.81□□□□□ -0.52
ZNF550-203ENST00000376230 NBPF15Q8N660 670 aa11.81□□□□□ -0.52
ZNF550-203ENST00000376230 PLBD2Q8NHP8 589 aa11.81□□□□□ -0.52
ZNF550-203ENST00000376230 ITGA6P23229 1130 aa11.81□□□□□ -0.52
ZNF550-203ENST00000376230 POLA2Q14181 598 aa11.81□□□□□ -0.52
ZNF550-203ENST00000376230 SPECC1Q5M775 1068 aa11.81□□□□□ -0.52
ZNF550-203ENST00000376230 XAGE2Q96GT9 111 aa11.81□□□□□ -0.52
ZNF550-203ENST00000376230 KAZALD1Q96I82 304 aa11.81□□□□□ -0.52
ZNF550-203ENST00000376230 ZNF219Q9P2Y4 722 aaPredicted RBP11.81□□□□□ -0.52
ZNF550-203ENST00000376230 ORC3Q9UBD5 711 aaPredicted RBP11.81□□□□□ -0.52
ZNF550-203ENST00000376230 U3KPZ7 1027 aaPredicted RBP11.81□□□□□ -0.52
ZNF550-203ENST00000376230 KIAA1210Q9ULL0 1709 aa11.8□□□□□ -0.52
ZNF550-203ENST00000376230 VIRMAQ69YN4 1812 aaKnown RBP11.8□□□□□ -0.52
ZNF550-203ENST00000376230 ANKRD18BA2A2Z9 1011 aa11.8□□□□□ -0.52
ZNF550-203ENST00000376230 DHX16O60231 1041 aaKnown RBP11.8□□□□□ -0.52
ZNF550-203ENST00000376230 HLFQ16534 295 aa11.8□□□□□ -0.52
ZNF550-203ENST00000376230 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.8□□□□□ -0.52
ZNF550-203ENST00000376230 V9GYY5 206 aaPredicted RBP11.8□□□□□ -0.52
ZNF550-203ENST00000376230 USP31Q70CQ4 1352 aa11.8□□□□□ -0.52
ZNF550-203ENST00000376230 GOLGA6L6A8MZA4 724 aa11.8□□□□□ -0.52
ZNF550-203ENST00000376230 CYP21A2P08686 494 aa11.8□□□□□ -0.52
ZNF550-203ENST00000376230 AKAP17AQ02040 695 aaKnown RBP11.8□□□□□ -0.52
ZNF550-203ENST00000376230 ANKRD1Q15327 319 aa11.8□□□□□ -0.52
ZNF550-203ENST00000376230 NGLY1Q96IV0 654 aa11.8□□□□□ -0.52
ZNF550-203ENST00000376230 C8orf37Q96NL8 207 aa11.8□□□□□ -0.52
ZNF550-203ENST00000376230 ZBTB1Q9Y2K1 713 aa11.8□□□□□ -0.52
ZNF550-203ENST00000376230 EYA2O00167 538 aa11.8□□□□□ -0.52
ZNF550-203ENST00000376230 HMGN5P82970 282 aaKnown RBP11.8□□□□□ -0.52
ZNF550-203ENST00000376230 ANO6Q4KMQ2 910 aa11.8□□□□□ -0.52
ZNF550-203ENST00000376230 FSIP1Q8NA03 581 aa11.8□□□□□ -0.52
ZNF550-203ENST00000376230 SH2B1Q9NRF2 756 aaPredicted RBP11.8□□□□□ -0.52
ZNF550-203ENST00000376230 NIP7Q9Y221 180 aaKnown RBP eCLIP11.8□□□□□ -0.52
ZNF550-203ENST00000376230 PTPDC1A2A3K4 754 aa11.79□□□□□ -0.52
ZNF550-203ENST00000376230 U2AF2P26368 475 aaKnown RBP eCLIP11.79□□□□□ -0.52
ZNF550-203ENST00000376230 UBE2HP62256 183 aa11.79□□□□□ -0.52
ZNF550-203ENST00000376230 CPLX2Q6PUV4 134 aaKnown RBP11.79□□□□□ -0.52
ZNF550-203ENST00000376230 CCAR2Q8N163 923 aaKnown RBP11.79□□□□□ -0.52
ZNF550-203ENST00000376230 PHKBQ93100 1093 aa11.79□□□□□ -0.52
ZNF550-203ENST00000376230 C8orf76Q96K31 380 aa11.79□□□□□ -0.52
ZNF550-203ENST00000376230 NAPBQ9H115 298 aa11.79□□□□□ -0.52
ZNF550-203ENST00000376230 GREM2Q9H772 168 aa11.79□□□□□ -0.52
ZNF550-203ENST00000376230 DLC1Q96QB1 1528 aa11.79□□□□□ -0.52
ZNF550-203ENST00000376230 RPS6KB1P23443 525 aa11.79□□□□□ -0.52
ZNF550-203ENST00000376230 MCM5P33992 734 aa11.79□□□□□ -0.52
ZNF550-203ENST00000376230 MTERF4Q7Z6M4 381 aaKnown RBP11.79□□□□□ -0.52
ZNF550-203ENST00000376230 KDRP35968 1356 aa11.79□□□□□ -0.52
ZNF550-203ENST00000376230 A0A1B0GVL5 298 aa11.78□□□□□ -0.52
ZNF550-203ENST00000376230 B4E1Z4 1266 aa11.78□□□□□ -0.52
ZNF550-203ENST00000376230 RANBP6O60518 1105 aaKnown RBP11.78□□□□□ -0.52
ZNF550-203ENST00000376230 PTGS1P23219 599 aa11.78□□□□□ -0.52
ZNF550-203ENST00000376230 BRINP3Q76B58 766 aa11.78□□□□□ -0.52
ZNF550-203ENST00000376230 TTC6Q86TZ1 520 aa11.78□□□□□ -0.52
ZNF550-203ENST00000376230 PODXL2Q9NZ53 605 aa11.78□□□□□ -0.52
ZNF550-203ENST00000376230 DIP2BQ9P265 1576 aa11.78□□□□□ -0.52
ZNF550-203ENST00000376230 NPHP4O75161 1426 aaPredicted RBP11.78□□□□□ -0.52
ZNF550-203ENST00000376230 MTMR6Q9Y217 621 aa11.78□□□□□ -0.52
ZNF550-203ENST00000376230 RGS12O14924 1447 aa11.78□□□□□ -0.52
ZNF550-203ENST00000376230 IFIT3O14879 490 aaKnown RBP11.78□□□□□ -0.52
ZNF550-203ENST00000376230 PRC1O43663 620 aa11.78□□□□□ -0.52
ZNF550-203ENST00000376230 IL15P40933 162 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms