RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 CDC5LQ99459 802 aaKnown RBP13.5□□□□□ -0.25
PDPN-202ENST00000376057 HCLS1P14317 486 aaPredicted RBP13.49□□□□□ -0.25
PDPN-202ENST00000376057 TM4SF1P30408 202 aa13.49□□□□□ -0.25
PDPN-202ENST00000376057 SRP68Q9UHB9 627 aaKnown RBP13.49□□□□□ -0.25
PDPN-202ENST00000376057 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.49□□□□□ -0.25
PDPN-202ENST00000376057 PUM3Q15397 648 aaKnown RBP13.49□□□□□ -0.25
PDPN-202ENST00000376057 CNNM1Q9NRU3 951 aa13.49□□□□□ -0.25
PDPN-202ENST00000376057 BSDC1Q9NW68 430 aaPredicted RBP13.49□□□□□ -0.25
PDPN-202ENST00000376057 IGHMBP2P38935 993 aaKnown RBP13.48□□□□□ -0.25
PDPN-202ENST00000376057 METTL24Q5JXM2 366 aa13.48□□□□□ -0.25
PDPN-202ENST00000376057 CCDC158Q5M9N0 1113 aa13.48□□□□□ -0.25
PDPN-202ENST00000376057 POTEAQ6S8J7 498 aa13.48□□□□□ -0.25
PDPN-202ENST00000376057 NBPF5PQ86XG9 351 aaPredicted RBP13.48□□□□□ -0.25
PDPN-202ENST00000376057 LPIN2Q92539 896 aa13.48□□□□□ -0.25
PDPN-202ENST00000376057 GYS1P13807 737 aa13.48□□□□□ -0.25
PDPN-202ENST00000376057 RABEP1Q15276 862 aa13.48□□□□□ -0.25
PDPN-202ENST00000376057 ATP2B3Q16720 1220 aa13.48□□□□□ -0.25
PDPN-202ENST00000376057 KCNB2Q92953 911 aa13.48□□□□□ -0.25
PDPN-202ENST00000376057 XAGE2Q96GT9 111 aa13.48□□□□□ -0.25
PDPN-202ENST00000376057 TIMM10P62072 90 aa13.47□□□□□ -0.25
PDPN-202ENST00000376057 NLRP3Q96P20 1036 aa13.47□□□□□ -0.25
PDPN-202ENST00000376057 BOLA2Q9H3K6 86 aa13.47□□□□□ -0.25
PDPN-202ENST00000376057 MCCP23508 829 aa13.47□□□□□ -0.25
PDPN-202ENST00000376057 ARID4AP29374 1257 aaPredicted RBP13.47□□□□□ -0.25
PDPN-202ENST00000376057 NFIXQ14938 502 aa13.47□□□□□ -0.25
PDPN-202ENST00000376057 KBTBD3Q8NAB2 608 aa13.47□□□□□ -0.25
PDPN-202ENST00000376057 DIAPH3Q9NSV4 1193 aa13.47□□□□□ -0.25
PDPN-202ENST00000376057 TNRC6CQ9HCJ0 1690 aaKnown RBP13.47□□□□□ -0.25
PDPN-202ENST00000376057 AKAP11Q9UKA4 1901 aa13.47□□□□□ -0.25
PDPN-202ENST00000376057 MED23Q9ULK4 1368 aa13.46□□□□□ -0.25
PDPN-202ENST00000376057 APBA3O96018 575 aa13.46□□□□□ -0.25
PDPN-202ENST00000376057 LRRFIP1Q32MZ4 808 aaKnown RBP13.46□□□□□ -0.25
PDPN-202ENST00000376057 NEUROD6Q96NK8 337 aa13.46□□□□□ -0.25
PDPN-202ENST00000376057 MPHOSPH8Q99549 860 aa13.46□□□□□ -0.25
PDPN-202ENST00000376057 LSG1Q9H089 658 aaKnown RBP13.46□□□□□ -0.25
PDPN-202ENST00000376057 UQCRFS1P1P0C7P4 283 aa13.46□□□□□ -0.25
PDPN-202ENST00000376057 KLRG2A4D1S0 409 aaPredicted RBP13.45□□□□□ -0.26
PDPN-202ENST00000376057 HSPA4P34932 840 aa13.45□□□□□ -0.26
PDPN-202ENST00000376057 ANKRD18AQ8IVF6 992 aa13.45□□□□□ -0.26
PDPN-202ENST00000376057 PAG1Q9NWQ8 432 aa13.45□□□□□ -0.26
PDPN-202ENST00000376057 SEC31BQ9NQW1 1179 aa13.45□□□□□ -0.26
PDPN-202ENST00000376057 DOCK2Q92608 1830 aa13.45□□□□□ -0.26
PDPN-202ENST00000376057 MAP4K4O95819 1239 aaPredicted RBP13.45□□□□□ -0.26
PDPN-202ENST00000376057 IFIT1P09914 478 aaKnown RBP13.45□□□□□ -0.26
PDPN-202ENST00000376057 SLC5A1P13866 664 aa13.45□□□□□ -0.26
PDPN-202ENST00000376057 HELLSQ9NRZ9 838 aa13.45□□□□□ -0.26
PDPN-202ENST00000376057 COL4A1P02462 1669 aa13.44□□□□□ -0.26
PDPN-202ENST00000376057 IGSF3O75054 1194 aa13.44□□□□□ -0.26
PDPN-202ENST00000376057 ZFYP08048 801 aaPredicted RBP13.44□□□□□ -0.26
PDPN-202ENST00000376057 CRY2Q49AN0 593 aa13.44□□□□□ -0.26
PDPN-202ENST00000376057 CCDC85AQ96PX6 553 aaPredicted RBP13.44□□□□□ -0.26
PDPN-202ENST00000376057 FSD1Q9BTV5 496 aa13.44□□□□□ -0.26
PDPN-202ENST00000376057 TBC1D2Q9BYX2 928 aa13.44□□□□□ -0.26
PDPN-202ENST00000376057 MYH7P12883 1935 aa13.44□□□□□ -0.26
PDPN-202ENST00000376057 GTF2E1P29083 439 aaPredicted RBP13.44□□□□□ -0.26
PDPN-202ENST00000376057 UBE4AQ14139 1066 aa13.44□□□□□ -0.26
PDPN-202ENST00000376057 TTC39AQ5SRH9 613 aa13.44□□□□□ -0.26
PDPN-202ENST00000376057 NLGN1Q8N2Q7 840 aa13.44□□□□□ -0.26
PDPN-202ENST00000376057 DAXXQ9UER7 740 aaPredicted RBP13.44□□□□□ -0.26
PDPN-202ENST00000376057 TTF1Q15361 905 aaPredicted RBP13.43□□□□□ -0.26
PDPN-202ENST00000376057 KIAA1211Q6ZU35 1233 aa13.43□□□□□ -0.26
PDPN-202ENST00000376057 C3orf67Q6ZVT6 689 aa13.43□□□□□ -0.26
PDPN-202ENST00000376057 LRRC37AA6NMS7 1700 aa13.43□□□□□ -0.26
PDPN-202ENST00000376057 PHF14O94880 888 aa13.43□□□□□ -0.26
PDPN-202ENST00000376057 CNBD1Q8NA66 436 aa13.43□□□□□ -0.26
PDPN-202ENST00000376057 MAP4K1Q92918 833 aa13.43□□□□□ -0.26
PDPN-202ENST00000376057 ANKRD2Q9GZV1 360 aa13.43□□□□□ -0.26
PDPN-202ENST00000376057 PDS5AQ29RF7 1337 aaKnown RBP13.42□□□□□ -0.26
PDPN-202ENST00000376057 FAM177BA6PVY3 158 aa13.42□□□□□ -0.26
PDPN-202ENST00000376057 ADORA1P30542 326 aa13.42□□□□□ -0.26
PDPN-202ENST00000376057 CHRNDQ07001 517 aa13.42□□□□□ -0.26
PDPN-202ENST00000376057 NMIQ13287 307 aaPredicted RBP13.42□□□□□ -0.26
PDPN-202ENST00000376057 CWC27Q6UX04 472 aaKnown RBP13.42□□□□□ -0.26
PDPN-202ENST00000376057 BICDL1Q6ZP65 573 aa13.42□□□□□ -0.26
PDPN-202ENST00000376057 SMIM5Q71RC9 77 aa13.42□□□□□ -0.26
PDPN-202ENST00000376057 CAMKK2Q96RR4 588 aa13.42□□□□□ -0.26
PDPN-202ENST00000376057 IL25Q9H293 177 aa13.42□□□□□ -0.26
PDPN-202ENST00000376057 ANO2Q9NQ90 1003 aa13.42□□□□□ -0.26
PDPN-202ENST00000376057 POLRMTO00411 1230 aaKnown RBP13.42□□□□□ -0.26
PDPN-202ENST00000376057 HOXA10P31260 410 aaPredicted RBP13.42□□□□□ -0.26
PDPN-202ENST00000376057 RPS8P62241 208 aaKnown RBP13.42□□□□□ -0.26
PDPN-202ENST00000376057 ZNF827Q17R98 1081 aa13.42□□□□□ -0.26
PDPN-202ENST00000376057 GORABQ5T7V8 394 aa13.42□□□□□ -0.26
PDPN-202ENST00000376057 PRR5LQ6MZQ0 368 aa13.42□□□□□ -0.26
PDPN-202ENST00000376057 ZNF804BA4D1E1 1349 aa13.42□□□□□ -0.26
PDPN-202ENST00000376057 ST5P78524 1137 aa13.41□□□□□ -0.26
PDPN-202ENST00000376057 TSGA10IPQ3SY00 556 aa13.41□□□□□ -0.26
PDPN-202ENST00000376057 ZMYM1Q5SVZ6 1142 aa13.41□□□□□ -0.26
PDPN-202ENST00000376057 TMED8Q6PL24 325 aaPredicted RBP13.41□□□□□ -0.26
PDPN-202ENST00000376057 CCDC171Q6TFL3 1326 aa13.41□□□□□ -0.26
PDPN-202ENST00000376057 SERPINB2P05120 415 aa13.41□□□□□ -0.26
PDPN-202ENST00000376057 MCMDC2Q4G0Z9 681 aa13.41□□□□□ -0.26
PDPN-202ENST00000376057 CCDC102BQ68D86 513 aa13.41□□□□□ -0.26
PDPN-202ENST00000376057 MINPP1Q9UNW1 487 aa13.41□□□□□ -0.26
PDPN-202ENST00000376057 RNF113AO15541 343 aaKnown RBP13.4□□□□□ -0.26
PDPN-202ENST00000376057 MCM2P49736 904 aa13.4□□□□□ -0.26
PDPN-202ENST00000376057 ZSCAN25Q6NSZ9 544 aa13.4□□□□□ -0.26
PDPN-202ENST00000376057 DDX46Q7L014 1031 aaKnown RBP13.4□□□□□ -0.26
PDPN-202ENST00000376057 TMC4Q7Z404 712 aa13.4□□□□□ -0.26
PDPN-202ENST00000376057 HSCBQ8IWL3 235 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms