RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 DYNC1I1O14576 645 aa16.65■□□□□ 0.26
MSH5-202ENST00000375740 HLFQ16534 295 aa16.65■□□□□ 0.26
MSH5-202ENST00000375740 TSGA10IPQ3SY00 556 aa16.65■□□□□ 0.26
MSH5-202ENST00000375740 BLOC1S2Q6QNY1 142 aa16.65■□□□□ 0.26
MSH5-202ENST00000375740 SYTL4Q96C24 671 aaPredicted RBP16.65■□□□□ 0.26
MSH5-202ENST00000375740 TPCN1Q9ULQ1 816 aa16.65■□□□□ 0.26
MSH5-202ENST00000375740 ROBO1Q9Y6N7 1651 aa16.65■□□□□ 0.26
MSH5-202ENST00000375740 A0A1B0GUL7 405 aa16.64■□□□□ 0.26
MSH5-202ENST00000375740 CYP19A1P11511 503 aaPredicted RBP16.64■□□□□ 0.26
MSH5-202ENST00000375740 GIGYF2Q6Y7W6 1299 aaKnown RBP16.64■□□□□ 0.26
MSH5-202ENST00000375740 NECAB1Q8N987 351 aa16.64■□□□□ 0.26
MSH5-202ENST00000375740 ZBTB38Q8NAP3 1195 aaPredicted RBP16.64■□□□□ 0.26
MSH5-202ENST00000375740 PAG1Q9NWQ8 432 aa16.64■□□□□ 0.26
MSH5-202ENST00000375740 HMG20BQ9P0W2 317 aa16.64■□□□□ 0.26
MSH5-202ENST00000375740 STX6O43752 255 aa16.64■□□□□ 0.25
MSH5-202ENST00000375740 ZSCAN22P10073 491 aaPredicted RBP16.64■□□□□ 0.25
MSH5-202ENST00000375740 ST3GAL1Q11201 340 aa16.64■□□□□ 0.25
MSH5-202ENST00000375740 TCEANC2Q96MN5 208 aa16.64■□□□□ 0.25
MSH5-202ENST00000375740 CEP126Q9P2H0 1117 aa16.64■□□□□ 0.25
MSH5-202ENST00000375740 RPS6KB1P23443 525 aa16.63■□□□□ 0.25
MSH5-202ENST00000375740 GJB2P29033 226 aa16.63■□□□□ 0.25
MSH5-202ENST00000375740 SYNE4Q8N205 404 aa16.63■□□□□ 0.25
MSH5-202ENST00000375740 GPTP24298 496 aa16.63■□□□□ 0.25
MSH5-202ENST00000375740 SLFNL1Q499Z3 407 aa16.63■□□□□ 0.25
MSH5-202ENST00000375740 GDPD2Q9HCC8 539 aa16.63■□□□□ 0.25
MSH5-202ENST00000375740 CSF1RP07333 972 aa16.63■□□□□ 0.25
MSH5-202ENST00000375740 PLA2G12BQ9BX93 195 aa16.63■□□□□ 0.25
MSH5-202ENST00000375740 TMEM63CQ9P1W3 806 aa16.63■□□□□ 0.25
MSH5-202ENST00000375740 COL16A1Q07092 1604 aaPredicted RBP16.62■□□□□ 0.25
MSH5-202ENST00000375740 IFIT1P09914 478 aaKnown RBP16.62■□□□□ 0.25
MSH5-202ENST00000375740 MPNDQ8N594 471 aa16.62■□□□□ 0.25
MSH5-202ENST00000375740 RNF214Q8ND24 703 aa16.62■□□□□ 0.25
MSH5-202ENST00000375740 ALDH8A1Q9H2A2 487 aaPredicted RBP16.62■□□□□ 0.25
MSH5-202ENST00000375740 U3KPZ7 1027 aaPredicted RBP16.62■□□□□ 0.25
MSH5-202ENST00000375740 MBD3O95983 291 aa16.62■□□□□ 0.25
MSH5-202ENST00000375740 USP48Q86UV5 1035 aa16.62■□□□□ 0.25
MSH5-202ENST00000375740 PALLDQ8WX93 1383 aa16.61■□□□□ 0.25
MSH5-202ENST00000375740 ZSCAN20P17040 1043 aaPredicted RBP16.61■□□□□ 0.25
MSH5-202ENST00000375740 ANKRD1Q15327 319 aa16.61■□□□□ 0.25
MSH5-202ENST00000375740 SASS6Q6UVJ0 657 aa16.61■□□□□ 0.25
MSH5-202ENST00000375740 NLRP10Q86W26 655 aa16.61■□□□□ 0.25
MSH5-202ENST00000375740 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.61■□□□□ 0.25
MSH5-202ENST00000375740 ZBTB1Q9Y2K1 713 aa16.61■□□□□ 0.25
MSH5-202ENST00000375740 TCHHQ07283 1943 aa16.61■□□□□ 0.25
MSH5-202ENST00000375740 SH3TC1Q8TE82 1336 aa16.61■□□□□ 0.25
MSH5-202ENST00000375740 SYCE3A1L190 88 aa16.61■□□□□ 0.25
MSH5-202ENST00000375740 IFIT5Q13325 482 aaKnown RBP16.61■□□□□ 0.25
MSH5-202ENST00000375740 TOB2Q14106 344 aaPredicted RBP16.61■□□□□ 0.25
MSH5-202ENST00000375740 TAF7LQ5H9L4 462 aa16.61■□□□□ 0.25
MSH5-202ENST00000375740 FBXO3Q9UK99 471 aa16.61■□□□□ 0.25
MSH5-202ENST00000375740 GADD45BO75293 160 aaPredicted RBP16.6■□□□□ 0.25
MSH5-202ENST00000375740 KRT32Q14532 448 aa16.6■□□□□ 0.25
MSH5-202ENST00000375740 HELLSQ9NRZ9 838 aa16.6■□□□□ 0.25
MSH5-202ENST00000375740 COL22A1Q8NFW1 1626 aaPredicted RBP16.6■□□□□ 0.25
MSH5-202ENST00000375740 F13A1P00488 732 aa16.6■□□□□ 0.25
MSH5-202ENST00000375740 CYP21A2P08686 494 aa16.6■□□□□ 0.25
MSH5-202ENST00000375740 NEK1Q96PY6 1258 aa16.6■□□□□ 0.25
MSH5-202ENST00000375740 AKAP2Q9Y2D5 859 aa16.6■□□□□ 0.25
MSH5-202ENST00000375740 AHDC1Q5TGY3 1603 aaPredicted RBP16.59■□□□□ 0.25
MSH5-202ENST00000375740 FAM177BA6PVY3 158 aa16.59■□□□□ 0.25
MSH5-202ENST00000375740 ADAMTS2O95450 1211 aa16.59■□□□□ 0.25
MSH5-202ENST00000375740 ADORA1P30542 326 aa16.59■□□□□ 0.25
MSH5-202ENST00000375740 HSP90AB3PQ58FF7 597 aa16.59■□□□□ 0.25
MSH5-202ENST00000375740 XAGE2Q96GT9 111 aa16.59■□□□□ 0.25
MSH5-202ENST00000375740 CDHR2Q9BYE9 1310 aa16.59■□□□□ 0.25
MSH5-202ENST00000375740 ZMYM1Q5SVZ6 1142 aa16.59■□□□□ 0.25
MSH5-202ENST00000375740 MTMR6Q9Y217 621 aa16.59■□□□□ 0.25
MSH5-202ENST00000375740 CNPY2Q9Y2B0 182 aa16.59■□□□□ 0.25
MSH5-202ENST00000375740 LRP6O75581 1613 aa16.59■□□□□ 0.25
MSH5-202ENST00000375740 PLCH1Q4KWH8 1693 aa16.58■□□□□ 0.25
MSH5-202ENST00000375740 CSPP1Q1MSJ5 1256 aa16.58■□□□□ 0.25
MSH5-202ENST00000375740 CCDC158Q5M9N0 1113 aa16.58■□□□□ 0.25
MSH5-202ENST00000375740 GORABQ5T7V8 394 aa16.58■□□□□ 0.25
MSH5-202ENST00000375740 TTLL11Q8NHH1 800 aa16.58■□□□□ 0.25
MSH5-202ENST00000375740 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.58■□□□□ 0.25
MSH5-202ENST00000375740 CCDC94Q9BW85 323 aaPredicted RBP16.58■□□□□ 0.25
MSH5-202ENST00000375740 TBC1D2BQ9UPU7 963 aa16.58■□□□□ 0.25
MSH5-202ENST00000375740 RNF113AO15541 343 aaKnown RBP16.58■□□□□ 0.24
MSH5-202ENST00000375740 FKBP4Q02790 459 aaKnown RBP eCLIP16.58■□□□□ 0.24
MSH5-202ENST00000375740 DMTNQ08495 405 aa16.58■□□□□ 0.24
MSH5-202ENST00000375740 TICAM2Q86XR7 235 aa16.58■□□□□ 0.24
MSH5-202ENST00000375740 TTC39AQ5SRH9 613 aa16.57■□□□□ 0.24
MSH5-202ENST00000375740 GREM2Q9H772 168 aa16.57■□□□□ 0.24
MSH5-202ENST00000375740 MTERF4Q7Z6M4 381 aaKnown RBP16.57■□□□□ 0.24
MSH5-202ENST00000375740 DZIP3Q86Y13 1208 aaKnown RBP16.57■□□□□ 0.24
MSH5-202ENST00000375740 ZNF710Q8N1W2 664 aa16.57■□□□□ 0.24
MSH5-202ENST00000375740 TRMT112Q9UI30 125 aaKnown RBP16.57■□□□□ 0.24
MSH5-202ENST00000375740 IRS4O14654 1257 aaPredicted RBP16.56■□□□□ 0.24
MSH5-202ENST00000375740 ITGA6P23229 1130 aa16.56■□□□□ 0.24
MSH5-202ENST00000375740 CBX1P83916 185 aa16.56■□□□□ 0.24
MSH5-202ENST00000375740 STK3Q13188 491 aa16.56■□□□□ 0.24
MSH5-202ENST00000375740 TMEM87AQ8NBN3 555 aa16.56■□□□□ 0.24
MSH5-202ENST00000375740 ATP6V1DQ9Y5K8 247 aa16.56■□□□□ 0.24
MSH5-202ENST00000375740 IL6STP40189 918 aaPredicted RBP16.56■□□□□ 0.24
MSH5-202ENST00000375740 LARP1BQ659C4 914 aaKnown RBP16.56■□□□□ 0.24
MSH5-202ENST00000375740 LRSAM1Q6UWE0 723 aa16.56■□□□□ 0.24
MSH5-202ENST00000375740 DSCC1Q9BVC3 393 aa16.56■□□□□ 0.24
MSH5-202ENST00000375740 RIPOR2Q9Y4F9 1068 aa16.56■□□□□ 0.24
MSH5-202ENST00000375740 WNK3Q9BYP7 1800 aa16.56■□□□□ 0.24
MSH5-202ENST00000375740 A0A0G2JS52 829 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms