RNA–Protein interactions for RNA: ENST00000374982.5

HLA-DRA-201, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

BASIC

Gene HLA-DRA, Length 1,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-201ENST00000374982 SLC9C1Q4G0N8 1177 aa13.58□□□□□ -0.24
HLA-DRA-201ENST00000374982 POLR3GLQ9BT43 218 aa13.58□□□□□ -0.24
HLA-DRA-201ENST00000374982 UNC80Q8N2C7 3258 aa13.58□□□□□ -0.24
HLA-DRA-201ENST00000374982 A0A1W2PPC1 479 aa13.57□□□□□ -0.24
HLA-DRA-201ENST00000374982 PTPN12Q05209 780 aaKnown RBP13.57□□□□□ -0.24
HLA-DRA-201ENST00000374982 DOK7Q18PE1 504 aa13.57□□□□□ -0.24
HLA-DRA-201ENST00000374982 SPRYD7Q5W111 196 aa13.57□□□□□ -0.24
HLA-DRA-201ENST00000374982 TTLL7Q6ZT98 887 aa13.57□□□□□ -0.24
HLA-DRA-201ENST00000374982 NBPF11Q86T75 865 aa13.57□□□□□ -0.24
HLA-DRA-201ENST00000374982 ZNF34Q8IZ26 560 aa13.57□□□□□ -0.24
HLA-DRA-201ENST00000374982 GAS2L2Q8NHY3 880 aa13.57□□□□□ -0.24
HLA-DRA-201ENST00000374982 STXBP5LQ9Y2K9 1186 aa13.57□□□□□ -0.24
HLA-DRA-201ENST00000374982 ZNF646O15015 1829 aaPredicted RBP13.57□□□□□ -0.24
HLA-DRA-201ENST00000374982 IGF2BP3O00425 579 aaKnown RBP eCLIP13.56□□□□□ -0.24
HLA-DRA-201ENST00000374982 VIL1P09327 827 aaKnown RBP13.56□□□□□ -0.24
HLA-DRA-201ENST00000374982 ZNF280AP59817 542 aaPredicted RBP13.56□□□□□ -0.24
HLA-DRA-201ENST00000374982 PPP1R42Q7Z4L9 355 aa13.56□□□□□ -0.24
HLA-DRA-201ENST00000374982 ZBTB3Q9H5J0 574 aa13.56□□□□□ -0.24
HLA-DRA-201ENST00000374982 PRDM6Q9NQX0 595 aa13.56□□□□□ -0.24
HLA-DRA-201ENST00000374982 PTCH2Q9Y6C5 1203 aa13.56□□□□□ -0.24
HLA-DRA-201ENST00000374982 MANSC4A6NHS7 340 aaPredicted RBP13.55□□□□□ -0.24
HLA-DRA-201ENST00000374982 INHBEP58166 350 aa13.55□□□□□ -0.24
HLA-DRA-201ENST00000374982 CRHR2Q13324 411 aa13.55□□□□□ -0.24
HLA-DRA-201ENST00000374982 GRAPQ13588 217 aa13.55□□□□□ -0.24
HLA-DRA-201ENST00000374982 SLC10A5Q5PT55 438 aa13.55□□□□□ -0.24
HLA-DRA-201ENST00000374982 KIF6Q6ZMV9 814 aa13.55□□□□□ -0.24
HLA-DRA-201ENST00000374982 DEFB123Q8N688 67 aa13.55□□□□□ -0.24
HLA-DRA-201ENST00000374982 GRAPLQ8TC17 118 aaPredicted RBP13.55□□□□□ -0.24
HLA-DRA-201ENST00000374982 ZSWIM8A7E2V4 1837 aa13.55□□□□□ -0.24
HLA-DRA-201ENST00000374982 NF2P35240 595 aa13.54□□□□□ -0.24
HLA-DRA-201ENST00000374982 SP3Q02447 781 aa13.54□□□□□ -0.24
HLA-DRA-201ENST00000374982 Q7L0L9 218 aa13.54□□□□□ -0.24
HLA-DRA-201ENST00000374982 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.54□□□□□ -0.24
HLA-DRA-201ENST00000374982 SHISA4Q96DD7 197 aa13.54□□□□□ -0.24
HLA-DRA-201ENST00000374982 PANK3Q9H999 370 aa13.54□□□□□ -0.24
HLA-DRA-201ENST00000374982 PRKG1Q13976 671 aa13.53□□□□□ -0.24
HLA-DRA-201ENST00000374982 ANKRD13DQ6ZTN6 518 aa13.53□□□□□ -0.24
HLA-DRA-201ENST00000374982 DDX46Q7L014 1031 aaKnown RBP13.53□□□□□ -0.24
HLA-DRA-201ENST00000374982 MYOZ2Q9NPC6 264 aa13.53□□□□□ -0.24
HLA-DRA-201ENST00000374982 POLLQ9UGP5 575 aa13.53□□□□□ -0.24
HLA-DRA-201ENST00000374982 NSFL1CQ9UNZ2 370 aaKnown RBP13.53□□□□□ -0.24
HLA-DRA-201ENST00000374982 COL4A1P02462 1669 aa13.53□□□□□ -0.24
HLA-DRA-201ENST00000374982 LAMA3Q16787 3333 aa13.52□□□□□ -0.24
HLA-DRA-201ENST00000374982 C6orf229H3BNL8 230 aa13.52□□□□□ -0.25
HLA-DRA-201ENST00000374982 ZBTB7BO15156 539 aaPredicted RBP13.52□□□□□ -0.25
HLA-DRA-201ENST00000374982 DIAPH1O60610 1272 aaKnown RBP13.52□□□□□ -0.25
HLA-DRA-201ENST00000374982 PARP10Q53GL7 1025 aa13.52□□□□□ -0.25
HLA-DRA-201ENST00000374982 GIGYF2Q6Y7W6 1299 aaKnown RBP13.52□□□□□ -0.25
HLA-DRA-201ENST00000374982 ARMC9Q7Z3E5 817 aa13.52□□□□□ -0.25
HLA-DRA-201ENST00000374982 TMC4Q7Z404 712 aa13.52□□□□□ -0.25
HLA-DRA-201ENST00000374982 SH3TC2Q8TF17 1288 aa13.52□□□□□ -0.25
HLA-DRA-201ENST00000374982 UTP14AQ9BVJ6 771 aaKnown RBP13.52□□□□□ -0.25
HLA-DRA-201ENST00000374982 ERBB4Q15303 1308 aa13.52□□□□□ -0.25
HLA-DRA-201ENST00000374982 HCLS1P14317 486 aaPredicted RBP13.51□□□□□ -0.25
HLA-DRA-201ENST00000374982 LDLRAD1Q5T700 205 aa13.51□□□□□ -0.25
HLA-DRA-201ENST00000374982 GPR153Q6NV75 609 aa13.51□□□□□ -0.25
HLA-DRA-201ENST00000374982 AGBL3Q8NEM8 1001 aa13.51□□□□□ -0.25
HLA-DRA-201ENST00000374982 HTATIP2Q9BUP3 242 aa13.51□□□□□ -0.25
HLA-DRA-201ENST00000374982 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.51□□□□□ -0.25
HLA-DRA-201ENST00000374982 NR2E3Q9Y5X4 410 aa13.51□□□□□ -0.25
HLA-DRA-201ENST00000374982 GPSM2P81274 684 aa13.5□□□□□ -0.25
HLA-DRA-201ENST00000374982 NBPF9Q3BBW0 867 aa13.5□□□□□ -0.25
HLA-DRA-201ENST00000374982 RSBN1LQ6PCB5 846 aaPredicted RBP13.5□□□□□ -0.25
HLA-DRA-201ENST00000374982 EYA3Q99504 573 aa13.5□□□□□ -0.25
HLA-DRA-201ENST00000374982 MTMR10Q9NXD2 777 aa13.5□□□□□ -0.25
HLA-DRA-201ENST00000374982 RRP7AQ9Y3A4 280 aaKnown RBP13.5□□□□□ -0.25
HLA-DRA-201ENST00000374982 USP17L8P0C7I0 530 aa13.49□□□□□ -0.25
HLA-DRA-201ENST00000374982 ZBTB48P10074 688 aaPredicted RBP13.49□□□□□ -0.25
HLA-DRA-201ENST00000374982 MYL6BP14649 208 aa13.49□□□□□ -0.25
HLA-DRA-201ENST00000374982 UBE2Q1Q7Z7E8 422 aa13.49□□□□□ -0.25
HLA-DRA-201ENST00000374982 NECTIN2Q92692 538 aa13.49□□□□□ -0.25
HLA-DRA-201ENST00000374982 WNK4Q96J92 1243 aa13.49□□□□□ -0.25
HLA-DRA-201ENST00000374982 GMLQ99445 158 aa13.49□□□□□ -0.25
HLA-DRA-201ENST00000374982 ANGEL1Q9UNK9 670 aaKnown RBP13.49□□□□□ -0.25
HLA-DRA-201ENST00000374982 FZD1Q9UP38 647 aa13.49□□□□□ -0.25
HLA-DRA-201ENST00000374982 COL9A1P20849 921 aa13.48□□□□□ -0.25
HLA-DRA-201ENST00000374982 SLC10A4Q96EP9 437 aa13.48□□□□□ -0.25
HLA-DRA-201ENST00000374982 STAP2Q9UGK3 403 aa13.48□□□□□ -0.25
HLA-DRA-201ENST00000374982 ALPK3Q96L96 1907 aa13.48□□□□□ -0.25
HLA-DRA-201ENST00000374982 ARHGEF6Q15052 776 aa13.47□□□□□ -0.25
HLA-DRA-201ENST00000374982 MTFR1Q15390 333 aa13.47□□□□□ -0.25
HLA-DRA-201ENST00000374982 OTUD7BQ6GQQ9 843 aa13.47□□□□□ -0.25
HLA-DRA-201ENST00000374982 MCM10Q7L590 875 aa13.47□□□□□ -0.25
HLA-DRA-201ENST00000374982 TBC1D16Q8TBP0 767 aa13.47□□□□□ -0.25
HLA-DRA-201ENST00000374982 CLMNQ96JQ2 1002 aa13.47□□□□□ -0.25
HLA-DRA-201ENST00000374982 COL3A1P02461 1466 aaPredicted RBP13.47□□□□□ -0.25
HLA-DRA-201ENST00000374982 G3V3G9 751 aa13.46□□□□□ -0.25
HLA-DRA-201ENST00000374982 U2SURPO15042 1029 aaKnown RBP13.46□□□□□ -0.25
HLA-DRA-201ENST00000374982 DCAF8Q5TAQ9 597 aa13.46□□□□□ -0.25
HLA-DRA-201ENST00000374982 CELF1Q92879 486 aaKnown RBP13.46□□□□□ -0.25
HLA-DRA-201ENST00000374982 PHACTR3Q96KR7 559 aa13.46□□□□□ -0.25
HLA-DRA-201ENST00000374982 PTPN18Q99952 460 aa13.46□□□□□ -0.25
HLA-DRA-201ENST00000374982 OTOFQ9HC10 1997 aa13.45□□□□□ -0.26
HLA-DRA-201ENST00000374982 ZC3H12CQ9C0D7 883 aaKnown RBP13.45□□□□□ -0.26
HLA-DRA-201ENST00000374982 WNT10BO00744 389 aa13.44□□□□□ -0.26
HLA-DRA-201ENST00000374982 GJA5P36382 358 aa13.44□□□□□ -0.26
HLA-DRA-201ENST00000374982 NKX2-3Q8TAU0 364 aa13.44□□□□□ -0.26
HLA-DRA-201ENST00000374982 SSC5DA1L4H1 1573 aa13.43□□□□□ -0.26
HLA-DRA-201ENST00000374982 EVI5O60447 810 aa13.43□□□□□ -0.26
HLA-DRA-201ENST00000374982 GJA8P48165 433 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms