RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 BICDL1Q6ZP65 573 aa20.38■□□□□ 0.85
PTPN20-203ENST00000374342 IL17RAQ96F46 866 aa20.38■□□□□ 0.85
PTPN20-203ENST00000374342 BCL11BQ9C0K0 894 aaPredicted RBP20.38■□□□□ 0.85
PTPN20-203ENST00000374342 CHMP5Q9NZZ3 219 aa20.38■□□□□ 0.85
PTPN20-203ENST00000374342 RTCBQ9Y3I0 505 aaKnown RBP20.38■□□□□ 0.85
PTPN20-203ENST00000374342 UBR3Q6ZT12 1888 aa20.38■□□□□ 0.85
PTPN20-203ENST00000374342 CCDC152Q4G0S7 254 aa20.37■□□□□ 0.85
PTPN20-203ENST00000374342 CCDC158Q5M9N0 1113 aa20.37■□□□□ 0.85
PTPN20-203ENST00000374342 USPL1Q5W0Q7 1092 aa20.37■□□□□ 0.85
PTPN20-203ENST00000374342 NARFQ9UHQ1 456 aa20.37■□□□□ 0.85
PTPN20-203ENST00000374342 COL4A1P02462 1669 aa20.37■□□□□ 0.85
PTPN20-203ENST00000374342 TBC1D9BQ66K14 1250 aa20.37■□□□□ 0.85
PTPN20-203ENST00000374342 KBTBD3Q8NAB2 608 aa20.37■□□□□ 0.85
PTPN20-203ENST00000374342 BCL2L12Q9HB09 334 aa20.37■□□□□ 0.85
PTPN20-203ENST00000374342 SNX14Q9Y5W7 946 aa20.37■□□□□ 0.85
PTPN20-203ENST00000374342 TAF1P21675 1872 aa20.36■□□□□ 0.85
PTPN20-203ENST00000374342 VGLL2Q8N8G2 317 aa20.36■□□□□ 0.85
PTPN20-203ENST00000374342 SEC31BQ9NQW1 1179 aa20.36■□□□□ 0.85
PTPN20-203ENST00000374342 SNRKQ9NRH2 765 aa20.36■□□□□ 0.85
PTPN20-203ENST00000374342 RTL9Q8NET4 1388 aa20.36■□□□□ 0.85
PTPN20-203ENST00000374342 ABCC12Q96J65 1359 aa20.36■□□□□ 0.85
PTPN20-203ENST00000374342 AKAP11Q9UKA4 1901 aa20.36■□□□□ 0.85
PTPN20-203ENST00000374342 RGL2O15211 777 aa20.35■□□□□ 0.85
PTPN20-203ENST00000374342 ZPR1O75312 459 aa20.35■□□□□ 0.85
PTPN20-203ENST00000374342 ERFEQ4G0M1 354 aa20.35■□□□□ 0.85
PTPN20-203ENST00000374342 KRT27Q7Z3Y8 459 aa20.35■□□□□ 0.85
PTPN20-203ENST00000374342 ZNF589Q86UQ0 364 aaPredicted RBP20.35■□□□□ 0.85
PTPN20-203ENST00000374342 AMIGO3Q86WK7 504 aa20.35■□□□□ 0.85
PTPN20-203ENST00000374342 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.35■□□□□ 0.85
PTPN20-203ENST00000374342 UPF3BQ9BZI7 483 aaKnown RBP20.35■□□□□ 0.85
PTPN20-203ENST00000374342 DDIT3P35638 169 aa20.35■□□□□ 0.85
PTPN20-203ENST00000374342 KCNJ4P48050 445 aa20.35■□□□□ 0.85
PTPN20-203ENST00000374342 MROH5Q6ZUA9 1318 aa20.34■□□□□ 0.85
PTPN20-203ENST00000374342 PHF14O94880 888 aa20.34■□□□□ 0.85
PTPN20-203ENST00000374342 CHGBP05060 677 aa20.34■□□□□ 0.85
PTPN20-203ENST00000374342 PRPF40BQ6NWY9 871 aaKnown RBP20.34■□□□□ 0.85
PTPN20-203ENST00000374342 RASEFQ8IZ41 740 aa20.34■□□□□ 0.85
PTPN20-203ENST00000374342 RBM8AQ9Y5S9 174 aaKnown RBP20.34■□□□□ 0.85
PTPN20-203ENST00000374342 FRAT2O75474 233 aaPredicted RBP20.33■□□□□ 0.85
PTPN20-203ENST00000374342 PDE8BO95263 885 aa20.33■□□□□ 0.85
PTPN20-203ENST00000374342 FAM196AQ6ZSG2 479 aa20.33■□□□□ 0.85
PTPN20-203ENST00000374342 MPHOSPH8Q99549 860 aa20.33■□□□□ 0.85
PTPN20-203ENST00000374342 MYO5AQ9Y4I1 1855 aaKnown RBP20.32■□□□□ 0.84
PTPN20-203ENST00000374342 FKBP4Q02790 459 aaKnown RBP eCLIP20.32■□□□□ 0.84
PTPN20-203ENST00000374342 NOL8Q76FK4 1167 aaKnown RBP20.32■□□□□ 0.84
PTPN20-203ENST00000374342 HELBQ8NG08 1087 aaPredicted RBP20.32■□□□□ 0.84
PTPN20-203ENST00000374342 ARHGEF1Q92888 912 aaKnown RBP20.32■□□□□ 0.84
PTPN20-203ENST00000374342 GTF2E1P29083 439 aaPredicted RBP20.31■□□□□ 0.84
PTPN20-203ENST00000374342 IGHMBP2P38935 993 aaKnown RBP20.31■□□□□ 0.84
PTPN20-203ENST00000374342 SCARF1Q14162 830 aa20.31■□□□□ 0.84
PTPN20-203ENST00000374342 PUM3Q15397 648 aaKnown RBP20.31■□□□□ 0.84
PTPN20-203ENST00000374342 LRRC4BQ9NT99 713 aa20.31■□□□□ 0.84
PTPN20-203ENST00000374342 TNRC6CQ9HCJ0 1690 aaKnown RBP20.31■□□□□ 0.84
PTPN20-203ENST00000374342 MCM2P49736 904 aa20.31■□□□□ 0.84
PTPN20-203ENST00000374342 CCDC129Q6ZRS4 1044 aa20.31■□□□□ 0.84
PTPN20-203ENST00000374342 C3orf67Q6ZVT6 689 aa20.31■□□□□ 0.84
PTPN20-203ENST00000374342 MAP4K1Q92918 833 aa20.31■□□□□ 0.84
PTPN20-203ENST00000374342 SETDB2Q96T68 719 aa20.31■□□□□ 0.84
PTPN20-203ENST00000374342 SEC62Q99442 399 aaKnown RBP20.31■□□□□ 0.84
PTPN20-203ENST00000374342 CIZ1Q9ULV3 898 aaPredicted RBP20.31■□□□□ 0.84
PTPN20-203ENST00000374342 TRIM37O94972 964 aa20.3■□□□□ 0.84
PTPN20-203ENST00000374342 NECTIN1Q15223 517 aa20.3■□□□□ 0.84
PTPN20-203ENST00000374342 NYXQ9GZU5 481 aa20.3■□□□□ 0.84
PTPN20-203ENST00000374342 RFC4P35249 363 aa20.29■□□□□ 0.84
PTPN20-203ENST00000374342 MCMDC2Q4G0Z9 681 aa20.29■□□□□ 0.84
PTPN20-203ENST00000374342 CREB3L3Q68CJ9 461 aa20.29■□□□□ 0.84
PTPN20-203ENST00000374342 NBPF5PQ86XG9 351 aaPredicted RBP20.29■□□□□ 0.84
PTPN20-203ENST00000374342 EP400Q96L91 3159 aa20.29■□□□□ 0.84
PTPN20-203ENST00000374342 TAF5LO75529 589 aa20.29■□□□□ 0.84
PTPN20-203ENST00000374342 SLFNL1Q499Z3 407 aa20.29■□□□□ 0.84
PTPN20-203ENST00000374342 PI16Q6UXB8 463 aa20.29■□□□□ 0.84
PTPN20-203ENST00000374342 LPIN2Q92539 896 aa20.29■□□□□ 0.84
PTPN20-203ENST00000374342 CDC5LQ99459 802 aaKnown RBP20.29■□□□□ 0.84
PTPN20-203ENST00000374342 SLC27A2O14975 620 aa20.28■□□□□ 0.84
PTPN20-203ENST00000374342 SLC5A1P13866 664 aa20.28■□□□□ 0.84
PTPN20-203ENST00000374342 ZKSCAN1P17029 563 aaPredicted RBP20.28■□□□□ 0.84
PTPN20-203ENST00000374342 CASTP20810 708 aaKnown RBP20.28■□□□□ 0.84
PTPN20-203ENST00000374342 ZAP70P43403 619 aa20.28■□□□□ 0.84
PTPN20-203ENST00000374342 TRAPPC3LQ5T215 181 aa20.28■□□□□ 0.84
PTPN20-203ENST00000374342 KCNB2Q92953 911 aa20.28■□□□□ 0.84
PTPN20-203ENST00000374342 TMX3Q96JJ7 454 aa20.28■□□□□ 0.84
PTPN20-203ENST00000374342 JAKMIP1Q96N16 626 aaKnown RBP20.28■□□□□ 0.84
PTPN20-203ENST00000374342 DOCK2Q92608 1830 aa20.28■□□□□ 0.84
PTPN20-203ENST00000374342 FGFR2P21802 821 aa20.27■□□□□ 0.84
PTPN20-203ENST00000374342 MCAMP43121 646 aa20.27■□□□□ 0.84
PTPN20-203ENST00000374342 ZNF772Q68DY9 489 aaPredicted RBP20.27■□□□□ 0.84
PTPN20-203ENST00000374342 RNF113AO15541 343 aaKnown RBP20.27■□□□□ 0.84
PTPN20-203ENST00000374342 PHKA1P46020 1223 aa20.27■□□□□ 0.84
PTPN20-203ENST00000374342 SF3B3Q15393 1217 aaKnown RBP20.27■□□□□ 0.84
PTPN20-203ENST00000374342 ADCK5Q3MIX3 580 aa20.27■□□□□ 0.84
PTPN20-203ENST00000374342 ZMYM1Q5SVZ6 1142 aa20.27■□□□□ 0.84
PTPN20-203ENST00000374342 TICAM2Q86XR7 235 aa20.27■□□□□ 0.84
PTPN20-203ENST00000374342 HELLSQ9NRZ9 838 aa20.27■□□□□ 0.84
PTPN20-203ENST00000374342 RBM6P78332 1123 aaKnown RBP20.26■□□□□ 0.83
PTPN20-203ENST00000374342 RNF20Q5VTR2 975 aa20.26■□□□□ 0.83
PTPN20-203ENST00000374342 RPAP1Q9BWH6 1393 aaPredicted RBP20.26■□□□□ 0.83
PTPN20-203ENST00000374342 MAST3O60307 1309 aa20.25■□□□□ 0.83
PTPN20-203ENST00000374342 CPA1P15085 419 aa20.25■□□□□ 0.83
PTPN20-203ENST00000374342 CCDC102BQ68D86 513 aa20.25■□□□□ 0.83
PTPN20-203ENST00000374342 ANKRD18AQ8IVF6 992 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms