RNA–Protein interactions for RNA: ENST00000374232.7

SNX30-201, Transcript of sorting nexin family member 30, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX30, Length 7,622 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-201ENST00000374232 ZBTB16Q05516 673 aa16.54■□□□□ 0.24
SNX30-201ENST00000374232 MSL1Q68DK7 614 aa16.54■□□□□ 0.24
SNX30-201ENST00000374232 TCHPQ9BT92 498 aa16.54■□□□□ 0.24
SNX30-201ENST00000374232 CHPF2Q9P2E5 772 aa16.54■□□□□ 0.24
SNX30-201ENST00000374232 TBCAO75347 108 aaKnown RBP16.54■□□□□ 0.24
SNX30-201ENST00000374232 SDSP20132 328 aa16.54■□□□□ 0.24
SNX30-201ENST00000374232 ATXN8OSP0DMR3 200 aa16.54■□□□□ 0.24
SNX30-201ENST00000374232 CCT6AP40227 531 aaKnown RBP16.54■□□□□ 0.24
SNX30-201ENST00000374232 C6orf163Q5TEZ5 329 aa16.54■□□□□ 0.24
SNX30-201ENST00000374232 SPECC1LQ69YQ0 1117 aa16.54■□□□□ 0.24
SNX30-201ENST00000374232 MEIS3Q99687 375 aa16.54■□□□□ 0.24
SNX30-201ENST00000374232 MAEAQ7L5Y9 396 aa16.54■□□□□ 0.24
SNX30-201ENST00000374232 CCDC114Q96M63 670 aa16.54■□□□□ 0.24
SNX30-201ENST00000374232 ODF2LQ9ULJ1 636 aa16.54■□□□□ 0.24
SNX30-201ENST00000374232 PPP2R5DQ14738 602 aa16.54■□□□□ 0.24
SNX30-201ENST00000374232 NOLC1Q14978 699 aaKnown RBP eCLIP16.54■□□□□ 0.24
SNX30-201ENST00000374232 MBIPQ9NS73 344 aa16.54■□□□□ 0.24
SNX30-201ENST00000374232 ASIC1P78348 528 aa16.53■□□□□ 0.24
SNX30-201ENST00000374232 SYT10Q6XYQ8 523 aa16.53■□□□□ 0.24
SNX30-201ENST00000374232 PHAXQ9H814 394 aaKnown RBP16.53■□□□□ 0.24
SNX30-201ENST00000374232 APOBRQ0VD83 1088 aa16.53■□□□□ 0.24
SNX30-201ENST00000374232 WTAPQ15007 396 aa16.53■□□□□ 0.24
SNX30-201ENST00000374232 CCDC65Q8IXS2 484 aa16.53■□□□□ 0.24
SNX30-201ENST00000374232 DDX19AQ9NUU7 478 aaKnown RBP16.53■□□□□ 0.24
SNX30-201ENST00000374232 ZNF569Q5MCW4 686 aa16.53■□□□□ 0.24
SNX30-201ENST00000374232 UBE2HP62256 183 aa16.53■□□□□ 0.24
SNX30-201ENST00000374232 NCOA7Q8NI08 942 aa16.53■□□□□ 0.24
SNX30-201ENST00000374232 PRG4Q92954 1404 aaPredicted RBP16.53■□□□□ 0.24
SNX30-201ENST00000374232 SLF2Q8IX21 1173 aa16.53■□□□□ 0.24
SNX30-201ENST00000374232 SPAG5Q96R06 1193 aa16.53■□□□□ 0.24
SNX30-201ENST00000374232 C9orf84Q5VXU9 1444 aa16.52■□□□□ 0.24
SNX30-201ENST00000374232 CCDC155Q8N6L0 562 aa16.52■□□□□ 0.24
SNX30-201ENST00000374232 KIF2AO00139 706 aaPredicted RBP16.52■□□□□ 0.24
SNX30-201ENST00000374232 CTAGE5O15320 804 aa16.52■□□□□ 0.24
SNX30-201ENST00000374232 ZSCAN22P10073 491 aaPredicted RBP16.52■□□□□ 0.24
SNX30-201ENST00000374232 SAP30BPQ9UHR5 308 aaKnown RBP16.52■□□□□ 0.24
SNX30-201ENST00000374232 NKTRP30414 1462 aaKnown RBP16.52■□□□□ 0.24
SNX30-201ENST00000374232 CAPN2P17655 700 aa16.52■□□□□ 0.23
SNX30-201ENST00000374232 TTC22Q5TAA0 569 aa16.52■□□□□ 0.23
SNX30-201ENST00000374232 RPGRIP1LQ68CZ1 1315 aa16.52■□□□□ 0.23
SNX30-201ENST00000374232 UBXN1Q04323 297 aa16.52■□□□□ 0.23
SNX30-201ENST00000374232 ZGPATQ8N5A5 531 aaKnown RBP16.52■□□□□ 0.23
SNX30-201ENST00000374232 HSPA4P34932 840 aa16.52■□□□□ 0.23
SNX30-201ENST00000374232 DCAF17Q5H9S7 520 aaPredicted RBP16.52■□□□□ 0.23
SNX30-201ENST00000374232 CLSTN2Q9H4D0 955 aa16.52■□□□□ 0.23
SNX30-201ENST00000374232 KRT9P35527 623 aa16.51■□□□□ 0.23
SNX30-201ENST00000374232 PDE4BQ07343 736 aa16.51■□□□□ 0.23
SNX30-201ENST00000374232 UBLCP1Q8WVY7 318 aaPredicted RBP16.51■□□□□ 0.23
SNX30-201ENST00000374232 CFAP57Q96MR6 1250 aa16.51■□□□□ 0.23
SNX30-201ENST00000374232 IGF1RP08069 1367 aa16.51■□□□□ 0.23
SNX30-201ENST00000374232 HMGB1P09429 215 aaKnown RBP16.51■□□□□ 0.23
SNX30-201ENST00000374232 GSDMDP57764 484 aa16.51■□□□□ 0.23
SNX30-201ENST00000374232 VEZTQ9HBM0 779 aa16.51■□□□□ 0.23
SNX30-201ENST00000374232 HLA-DOAP06340 250 aa16.51■□□□□ 0.23
SNX30-201ENST00000374232 RASA3Q14644 834 aa16.51■□□□□ 0.23
SNX30-201ENST00000374232 TAF12Q16514 161 aa16.51■□□□□ 0.23
SNX30-201ENST00000374232 TTC21AQ8NDW8 1320 aa16.51■□□□□ 0.23
SNX30-201ENST00000374232 HPDP32754 393 aaPredicted RBP16.51■□□□□ 0.23
SNX30-201ENST00000374232 TPD52P55327 224 aaPredicted RBP16.51■□□□□ 0.23
SNX30-201ENST00000374232 RNF41Q9H4P4 317 aaPredicted RBP16.51■□□□□ 0.23
SNX30-201ENST00000374232 CWC25Q9NXE8 425 aaPredicted RBP16.51■□□□□ 0.23
SNX30-201ENST00000374232 EIF6P56537 245 aaKnown RBP16.51■□□□□ 0.23
SNX30-201ENST00000374232 RAPGEF1Q13905 1077 aa16.51■□□□□ 0.23
SNX30-201ENST00000374232 FBXO31Q5XUX0 539 aaPredicted RBP16.5■□□□□ 0.23
SNX30-201ENST00000374232 ECHDC1Q9NTX5 307 aa16.5■□□□□ 0.23
SNX30-201ENST00000374232 RBM8AQ9Y5S9 174 aaKnown RBP16.5■□□□□ 0.23
SNX30-201ENST00000374232 KIF5BP33176 963 aa16.5■□□□□ 0.23
SNX30-201ENST00000374232 MAP7D1Q3KQU3 841 aa16.5■□□□□ 0.23
SNX30-201ENST00000374232 FNBP4Q8N3X1 1017 aaPredicted RBP16.5■□□□□ 0.23
SNX30-201ENST00000374232 PSMB7Q99436 277 aa16.5■□□□□ 0.23
SNX30-201ENST00000374232 PPP1R21Q6ZMI0 780 aa16.5■□□□□ 0.23
SNX30-201ENST00000374232 STXBP4Q6ZWJ1 553 aa16.5■□□□□ 0.23
SNX30-201ENST00000374232 SMC1BQ8NDV3 1235 aa16.5■□□□□ 0.23
SNX30-201ENST00000374232 SREK1Q8WXA9 508 aaKnown RBP16.5■□□□□ 0.23
SNX30-201ENST00000374232 BAG3O95817 575 aa16.5■□□□□ 0.23
SNX30-201ENST00000374232 NAPAP54920 295 aa16.49■□□□□ 0.23
SNX30-201ENST00000374232 DAAM2Q86T65 1068 aa16.49■□□□□ 0.23
SNX30-201ENST00000374232 CTAGE15A4D2H0 777 aa16.49■□□□□ 0.23
SNX30-201ENST00000374232 CTAGE8P0CG41 777 aa16.49■□□□□ 0.23
SNX30-201ENST00000374232 SEPT14Q6ZU15 432 aa16.49■□□□□ 0.23
SNX30-201ENST00000374232 CTAGE6Q86UF2 777 aa16.49■□□□□ 0.23
SNX30-201ENST00000374232 CTAGE4Q8IX94 777 aa16.49■□□□□ 0.23
SNX30-201ENST00000374232 IFNKQ9P0W0 207 aa16.49■□□□□ 0.23
SNX30-201ENST00000374232 CKAP4Q07065 602 aaKnown RBP16.49■□□□□ 0.23
SNX30-201ENST00000374232 KIAA1107Q9UPP5 1409 aa16.49■□□□□ 0.23
SNX30-201ENST00000374232 ZBTB43O43298 467 aa16.49■□□□□ 0.23
SNX30-201ENST00000374232 KRT24Q2M2I5 525 aa16.49■□□□□ 0.23
SNX30-201ENST00000374232 BBXQ8WY36 941 aaPredicted RBP16.49■□□□□ 0.23
SNX30-201ENST00000374232 U2AF2P26368 475 aaKnown RBP eCLIP16.49■□□□□ 0.23
SNX30-201ENST00000374232 XRCC6P12956 609 aaKnown RBP eCLIP16.48■□□□□ 0.23
SNX30-201ENST00000374232 BIN2Q9UBW5 565 aaPredicted RBP16.48■□□□□ 0.23
SNX30-201ENST00000374232 PSMD6Q15008 389 aa16.48■□□□□ 0.23
SNX30-201ENST00000374232 RTN1Q16799 776 aa16.48■□□□□ 0.23
SNX30-201ENST00000374232 SEC62Q99442 399 aaKnown RBP16.48■□□□□ 0.23
SNX30-201ENST00000374232 ARFGAP3Q9NP61 516 aa16.48■□□□□ 0.23
SNX30-201ENST00000374232 SORBS3O60504 671 aa16.48■□□□□ 0.23
SNX30-201ENST00000374232 PTPROQ16827 1216 aa16.48■□□□□ 0.23
SNX30-201ENST00000374232 GEN1Q17RS7 908 aa16.48■□□□□ 0.23
SNX30-201ENST00000374232 NAP1L3Q99457 506 aaPredicted RBP16.48■□□□□ 0.23
SNX30-201ENST00000374232 TTC36A6NLP5 189 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms