RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 AOPEPQ8N6M6 819 aa12.56□□□□□ -0.4
CSMD2-204ENST00000373380 NFATC2IPQ8NCF5 419 aa12.56□□□□□ -0.4
CSMD2-204ENST00000373380 CRACR2AQ9BSW2 395 aa12.56□□□□□ -0.4
CSMD2-204ENST00000373380 IQSEC3Q9UPP2 1182 aaPredicted RBP12.56□□□□□ -0.4
CSMD2-204ENST00000373380 DEPDC5O75140 1603 aa12.56□□□□□ -0.4
CSMD2-204ENST00000373380 GOLGA6L10A6NI86 522 aa12.56□□□□□ -0.4
CSMD2-204ENST00000373380 USP8P40818 1118 aa12.56□□□□□ -0.4
CSMD2-204ENST00000373380 SLC4A8Q2Y0W8 1093 aa12.56□□□□□ -0.4
CSMD2-204ENST00000373380 JAKMIP3Q5VZ66 844 aa12.56□□□□□ -0.4
CSMD2-204ENST00000373380 LUZP1Q86V48 1076 aa12.56□□□□□ -0.4
CSMD2-204ENST00000373380 NPHP3Q7Z494 1330 aa12.56□□□□□ -0.4
CSMD2-204ENST00000373380 PTGS1P23219 599 aa12.56□□□□□ -0.4
CSMD2-204ENST00000373380 PLCD3Q8N3E9 789 aa12.56□□□□□ -0.4
CSMD2-204ENST00000373380 SEPT11Q9NVA2 429 aaKnown RBP12.56□□□□□ -0.4
CSMD2-204ENST00000373380 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.56□□□□□ -0.4
CSMD2-204ENST00000373380 PNMA6EA0A0J9YXQ4 647 aa12.55□□□□□ -0.4
CSMD2-204ENST00000373380 MRPS27Q92552 414 aaKnown RBP12.55□□□□□ -0.4
CSMD2-204ENST00000373380 RNF41Q9H4P4 317 aaPredicted RBP12.55□□□□□ -0.4
CSMD2-204ENST00000373380 GTF2F1P35269 517 aaKnown RBP eCLIP12.55□□□□□ -0.4
CSMD2-204ENST00000373380 UBASH3AP57075 661 aa12.55□□□□□ -0.4
CSMD2-204ENST00000373380 AKAP4Q5JQC9 854 aa12.55□□□□□ -0.4
CSMD2-204ENST00000373380 ALG1Q9BT22 464 aa12.55□□□□□ -0.4
CSMD2-204ENST00000373380 PHF23Q9BUL5 403 aaPredicted RBP12.55□□□□□ -0.4
CSMD2-204ENST00000373380 FLT4P35916 1363 aa12.55□□□□□ -0.4
CSMD2-204ENST00000373380 PPRC1Q5VV67 1664 aaKnown RBP12.55□□□□□ -0.4
CSMD2-204ENST00000373380 APOBRQ0VD83 1088 aa12.55□□□□□ -0.4
CSMD2-204ENST00000373380 MFSD6Q6ZSS7 791 aa12.55□□□□□ -0.4
CSMD2-204ENST00000373380 CCDC148Q8NFR7 591 aa12.55□□□□□ -0.4
CSMD2-204ENST00000373380 MYO6Q9UM54 1294 aa12.55□□□□□ -0.4
CSMD2-204ENST00000373380 CCDC194A0A1B0GVG4 234 aa12.55□□□□□ -0.4
CSMD2-204ENST00000373380 CHL1O00533 1208 aa12.55□□□□□ -0.4
CSMD2-204ENST00000373380 RIMS2Q9UQ26 1411 aa12.54□□□□□ -0.4
CSMD2-204ENST00000373380 TTC41PQ6P2S7 1318 aa12.54□□□□□ -0.4
CSMD2-204ENST00000373380 SPA17Q15506 151 aa12.54□□□□□ -0.4
CSMD2-204ENST00000373380 DZIP1Q86YF9 867 aaKnown RBP12.54□□□□□ -0.4
CSMD2-204ENST00000373380 KLHDC4Q8TBB5 520 aa12.54□□□□□ -0.4
CSMD2-204ENST00000373380 DNAI1Q9UI46 699 aa12.54□□□□□ -0.4
CSMD2-204ENST00000373380 NRXN1Q9ULB1 1477 aa12.54□□□□□ -0.4
CSMD2-204ENST00000373380 ZMYM3Q14202 1370 aa12.54□□□□□ -0.4
CSMD2-204ENST00000373380 IGSF3O75054 1194 aa12.54□□□□□ -0.4
CSMD2-204ENST00000373380 CATIPQ7Z7H3 387 aa12.54□□□□□ -0.4
CSMD2-204ENST00000373380 ARHGAP31Q2M1Z3 1444 aa12.54□□□□□ -0.4
CSMD2-204ENST00000373380 ZBTB43O43298 467 aa12.54□□□□□ -0.4
CSMD2-204ENST00000373380 FBXO3Q9UK99 471 aa12.54□□□□□ -0.4
CSMD2-204ENST00000373380 TNRQ92752 1358 aa12.54□□□□□ -0.4
CSMD2-204ENST00000373380 ATP2B3Q16720 1220 aa12.53□□□□□ -0.4
CSMD2-204ENST00000373380 SLC9C2Q5TAH2 1124 aa12.53□□□□□ -0.4
CSMD2-204ENST00000373380 ZNF397Q8NF99 534 aaPredicted RBP12.53□□□□□ -0.4
CSMD2-204ENST00000373380 IDEP14735 1019 aa12.53□□□□□ -0.4
CSMD2-204ENST00000373380 AFMP43652 599 aa12.53□□□□□ -0.4
CSMD2-204ENST00000373380 HS1BP3Q53T59 392 aa12.53□□□□□ -0.4
CSMD2-204ENST00000373380 ZBTB9Q96C00 473 aa12.53□□□□□ -0.4
CSMD2-204ENST00000373380 PLEKHF1Q96S99 279 aa12.53□□□□□ -0.4
CSMD2-204ENST00000373380 PAXBP1Q9Y5B6 917 aa12.53□□□□□ -0.4
CSMD2-204ENST00000373380 ADAMTS2O95450 1211 aa12.53□□□□□ -0.4
CSMD2-204ENST00000373380 RUFY3Q7L099 469 aa12.53□□□□□ -0.4
CSMD2-204ENST00000373380 CACNA2D4Q7Z3S7 1137 aa12.53□□□□□ -0.4
CSMD2-204ENST00000373380 ZNF444Q8N0Y2 327 aaPredicted RBP12.53□□□□□ -0.4
CSMD2-204ENST00000373380 CABLES1Q8TDN4 633 aa12.53□□□□□ -0.4
CSMD2-204ENST00000373380 CCDC12Q8WUD4 166 aaPredicted RBP12.53□□□□□ -0.4
CSMD2-204ENST00000373380 RNF216Q9NWF9 866 aaPredicted RBP12.53□□□□□ -0.4
CSMD2-204ENST00000373380 TFCP2Q12800 502 aa12.53□□□□□ -0.4
CSMD2-204ENST00000373380 TAX1BP1Q86VP1 789 aa12.53□□□□□ -0.4
CSMD2-204ENST00000373380 KCNG4Q8TDN1 519 aa12.53□□□□□ -0.4
CSMD2-204ENST00000373380 GBP3Q9H0R5 595 aa12.53□□□□□ -0.4
CSMD2-204ENST00000373380 PAG1Q9NWQ8 432 aa12.53□□□□□ -0.4
CSMD2-204ENST00000373380 CCDC171Q6TFL3 1326 aa12.52□□□□□ -0.4
CSMD2-204ENST00000373380 ERLIN2O94905 339 aa12.52□□□□□ -0.4
CSMD2-204ENST00000373380 NBPF7P0C2Y1 421 aaPredicted RBP12.52□□□□□ -0.4
CSMD2-204ENST00000373380 TTF1Q15361 905 aaPredicted RBP12.52□□□□□ -0.4
CSMD2-204ENST00000373380 IQCEQ6IPM2 695 aa12.52□□□□□ -0.4
CSMD2-204ENST00000373380 BICC1Q9H694 974 aaKnown RBP12.52□□□□□ -0.4
CSMD2-204ENST00000373380 VAT1LQ9HCJ6 419 aa12.52□□□□□ -0.4
CSMD2-204ENST00000373380 ANKIB1Q9P2G1 1089 aa12.52□□□□□ -0.4
CSMD2-204ENST00000373380 N4BP3O15049 544 aa12.52□□□□□ -0.41
CSMD2-204ENST00000373380 PRC1O43663 620 aa12.52□□□□□ -0.41
CSMD2-204ENST00000373380 IL15P40933 162 aaPredicted RBP12.52□□□□□ -0.41
CSMD2-204ENST00000373380 UBA7P41226 1012 aa12.52□□□□□ -0.41
CSMD2-204ENST00000373380 C17orf53Q8N3J3 647 aaPredicted RBP12.52□□□□□ -0.41
CSMD2-204ENST00000373380 TAF4BQ92750 862 aa12.52□□□□□ -0.41
CSMD2-204ENST00000373380 CHAMP1Q96JM3 812 aa12.52□□□□□ -0.41
CSMD2-204ENST00000373380 SEC63Q9UGP8 760 aaKnown RBP12.52□□□□□ -0.41
CSMD2-204ENST00000373380 ZNF652Q9Y2D9 606 aa12.52□□□□□ -0.41
CSMD2-204ENST00000373380 YEATS2Q9ULM3 1422 aa12.52□□□□□ -0.41
CSMD2-204ENST00000373380 PTPDC1A2A3K4 754 aa12.52□□□□□ -0.41
CSMD2-204ENST00000373380 MPHOSPH10O00566 681 aaKnown RBP12.52□□□□□ -0.41
CSMD2-204ENST00000373380 SPTLC2O15270 562 aa12.52□□□□□ -0.41
CSMD2-204ENST00000373380 ZNF76P36508 570 aa12.52□□□□□ -0.41
CSMD2-204ENST00000373380 TIMM10P62072 90 aa12.52□□□□□ -0.41
CSMD2-204ENST00000373380 FKBP15Q5T1M5 1219 aa12.52□□□□□ -0.41
CSMD2-204ENST00000373380 GADD45BO75293 160 aaPredicted RBP12.51□□□□□ -0.41
CSMD2-204ENST00000373380 RXRAP19793 462 aa12.51□□□□□ -0.41
CSMD2-204ENST00000373380 TXLNBQ8N3L3 684 aa12.51□□□□□ -0.41
CSMD2-204ENST00000373380 LMBRD1Q9NUN5 540 aa12.51□□□□□ -0.41
CSMD2-204ENST00000373380 TSPY2A6NKD2 308 aa12.51□□□□□ -0.41
CSMD2-204ENST00000373380 YEATS4O95619 227 aa12.51□□□□□ -0.41
CSMD2-204ENST00000373380 TDRD12Q587J7 1177 aaKnown RBP12.51□□□□□ -0.41
CSMD2-204ENST00000373380 CCDC150Q8NCX0 1101 aa12.51□□□□□ -0.41
CSMD2-204ENST00000373380 GIMAP7Q8NHV1 300 aa12.51□□□□□ -0.41
CSMD2-204ENST00000373380 KIDINS220Q9ULH0 1771 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms