RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 NPHP4O75161 1426 aaPredicted RBP17.41■□□□□ 0.38
COL9A2-202ENST00000372748 IGKV5-2P06315 115 aa17.41■□□□□ 0.38
COL9A2-202ENST00000372748 IQCB1Q15051 598 aa17.41■□□□□ 0.38
COL9A2-202ENST00000372748 PTPN14Q15678 1187 aa17.41■□□□□ 0.38
COL9A2-202ENST00000372748 KMT5BQ4FZB7 885 aa17.41■□□□□ 0.38
COL9A2-202ENST00000372748 KRT28Q7Z3Y7 464 aa17.41■□□□□ 0.38
COL9A2-202ENST00000372748 DDX21Q9NR30 783 aaKnown RBP eCLIP17.41■□□□□ 0.38
COL9A2-202ENST00000372748 CRYBG1Q9Y4K1 1723 aa17.4■□□□□ 0.38
COL9A2-202ENST00000372748 DDX58O95786 925 aaKnown RBP17.4■□□□□ 0.38
COL9A2-202ENST00000372748 CHGBP05060 677 aa17.4■□□□□ 0.38
COL9A2-202ENST00000372748 HSP90B1P14625 803 aaKnown RBP17.4■□□□□ 0.38
COL9A2-202ENST00000372748 NDUFB9Q9Y6M9 179 aa17.4■□□□□ 0.38
COL9A2-202ENST00000372748 RESTQ13127 1097 aa17.4■□□□□ 0.38
COL9A2-202ENST00000372748 NFATC2IPQ8NCF5 419 aa17.4■□□□□ 0.38
COL9A2-202ENST00000372748 HEG1Q9ULI3 1381 aa17.39■□□□□ 0.38
COL9A2-202ENST00000372748 NLRP2Q9NX02 1062 aa17.39■□□□□ 0.37
COL9A2-202ENST00000372748 CCDC69A6NI79 296 aa17.39■□□□□ 0.37
COL9A2-202ENST00000372748 BECN2A8MW95 431 aa17.39■□□□□ 0.37
COL9A2-202ENST00000372748 PDIA4P13667 645 aaKnown RBP17.39■□□□□ 0.37
COL9A2-202ENST00000372748 EPHA10Q5JZY3 1008 aa17.39■□□□□ 0.37
COL9A2-202ENST00000372748 MYD88Q99836 296 aa17.39■□□□□ 0.37
COL9A2-202ENST00000372748 HIP1O00291 1037 aa17.38■□□□□ 0.37
COL9A2-202ENST00000372748 SLFN14P0C7P3 912 aa17.38■□□□□ 0.37
COL9A2-202ENST00000372748 ELF2Q15723 593 aa17.38■□□□□ 0.37
COL9A2-202ENST00000372748 ZNF790Q6PG37 636 aa17.38■□□□□ 0.37
COL9A2-202ENST00000372748 COPS6Q7L5N1 327 aa17.38■□□□□ 0.37
COL9A2-202ENST00000372748 XAGE3Q8WTP9 111 aa17.38■□□□□ 0.37
COL9A2-202ENST00000372748 DDX17Q92841 729 aaKnown RBP17.38■□□□□ 0.37
COL9A2-202ENST00000372748 SYTL4Q96C24 671 aaPredicted RBP17.38■□□□□ 0.37
COL9A2-202ENST00000372748 GTF3C6Q969F1 213 aa17.38■□□□□ 0.37
COL9A2-202ENST00000372748 MORC2Q9Y6X9 1032 aaPredicted RBP17.38■□□□□ 0.37
COL9A2-202ENST00000372748 Q6ZUG5 572 aa17.37■□□□□ 0.37
COL9A2-202ENST00000372748 CCAR1Q8IX12 1150 aaKnown RBP17.37■□□□□ 0.37
COL9A2-202ENST00000372748 GOLPH3LQ9H4A5 285 aa17.37■□□□□ 0.37
COL9A2-202ENST00000372748 HDAC5Q9UQL6 1122 aa17.37■□□□□ 0.37
COL9A2-202ENST00000372748 CDC25BP30305 580 aa17.37■□□□□ 0.37
COL9A2-202ENST00000372748 GABPB1Q06547 395 aaPredicted RBP17.37■□□□□ 0.37
COL9A2-202ENST00000372748 FBXO38Q6PIJ6 1188 aa17.37■□□□□ 0.37
COL9A2-202ENST00000372748 CCDC129Q6ZRS4 1044 aa17.37■□□□□ 0.37
COL9A2-202ENST00000372748 NYAP1Q6ZVC0 841 aa17.37■□□□□ 0.37
COL9A2-202ENST00000372748 RAPGEF4Q8WZA2 1011 aa17.37■□□□□ 0.37
COL9A2-202ENST00000372748 NCAPD2Q15021 1401 aa17.36■□□□□ 0.37
COL9A2-202ENST00000372748 TAF5LO75529 589 aa17.36■□□□□ 0.37
COL9A2-202ENST00000372748 ST7Q9NRC1 585 aa17.36■□□□□ 0.37
COL9A2-202ENST00000372748 NEURL1BA8MQ27 555 aa17.36■□□□□ 0.37
COL9A2-202ENST00000372748 RBM6P78332 1123 aaKnown RBP17.36■□□□□ 0.37
COL9A2-202ENST00000372748 CCZ1BP86790 482 aa17.36■□□□□ 0.37
COL9A2-202ENST00000372748 CCZ1P86791 482 aaPredicted RBP17.36■□□□□ 0.37
COL9A2-202ENST00000372748 FGD1P98174 961 aa17.36■□□□□ 0.37
COL9A2-202ENST00000372748 NEXNQ0ZGT2 675 aa17.36■□□□□ 0.37
COL9A2-202ENST00000372748 ZNF397Q8NF99 534 aaPredicted RBP17.36■□□□□ 0.37
COL9A2-202ENST00000372748 MRFAP1L1Q96HT8 127 aa17.36■□□□□ 0.37
COL9A2-202ENST00000372748 CCDC9Q9Y3X0 531 aaKnown RBP17.36■□□□□ 0.37
COL9A2-202ENST00000372748 MED23Q9ULK4 1368 aa17.35■□□□□ 0.37
COL9A2-202ENST00000372748 STX1AQ16623 288 aa17.35■□□□□ 0.37
COL9A2-202ENST00000372748 KRT222Q8N1A0 295 aa17.35■□□□□ 0.37
COL9A2-202ENST00000372748 NEK1Q96PY6 1258 aa17.35■□□□□ 0.37
COL9A2-202ENST00000372748 CFAP45Q9UL16 551 aa17.35■□□□□ 0.37
COL9A2-202ENST00000372748 ERBB3P21860 1342 aa17.35■□□□□ 0.37
COL9A2-202ENST00000372748 SARM1Q6SZW1 724 aa17.35■□□□□ 0.37
COL9A2-202ENST00000372748 ZNF496Q96IT1 587 aaPredicted RBP17.35■□□□□ 0.37
COL9A2-202ENST00000372748 SEC62Q99442 399 aaKnown RBP17.35■□□□□ 0.37
COL9A2-202ENST00000372748 SCRN1Q12765 414 aa17.34■□□□□ 0.37
COL9A2-202ENST00000372748 GCKRQ14397 625 aa17.34■□□□□ 0.37
COL9A2-202ENST00000372748 PROSER2Q86WR7 435 aaPredicted RBP17.34■□□□□ 0.37
COL9A2-202ENST00000372748 DHX40Q8IX18 779 aaKnown RBP17.34■□□□□ 0.37
COL9A2-202ENST00000372748 SLC52A2Q9HAB3 445 aa17.34■□□□□ 0.37
COL9A2-202ENST00000372748 UTYO14607 1347 aa17.34■□□□□ 0.37
COL9A2-202ENST00000372748 COL15A1P39059 1388 aa17.34■□□□□ 0.37
COL9A2-202ENST00000372748 TERF2Q15554 542 aa17.34■□□□□ 0.37
COL9A2-202ENST00000372748 CCAR2Q8N163 923 aaKnown RBP17.34■□□□□ 0.37
COL9A2-202ENST00000372748 AOPEPQ8N6M6 819 aa17.34■□□□□ 0.37
COL9A2-202ENST00000372748 SNRKQ9NRH2 765 aa17.34■□□□□ 0.37
COL9A2-202ENST00000372748 RGPD5Q99666 1765 aa17.34■□□□□ 0.37
COL9A2-202ENST00000372748 ZBTB22O15209 634 aa17.34■□□□□ 0.37
COL9A2-202ENST00000372748 CAVIN2O95810 425 aa17.34■□□□□ 0.37
COL9A2-202ENST00000372748 GUCY1B3Q02153 619 aa17.34■□□□□ 0.37
COL9A2-202ENST00000372748 CABLES1Q8TDN4 633 aa17.34■□□□□ 0.37
COL9A2-202ENST00000372748 HMG20BQ9P0W2 317 aa17.34■□□□□ 0.37
COL9A2-202ENST00000372748 ATP5J2-PTCD1G3V325 749 aa17.33■□□□□ 0.36
COL9A2-202ENST00000372748 PTCD1O75127 700 aaKnown RBP17.33■□□□□ 0.36
COL9A2-202ENST00000372748 ADD1P35611 737 aaKnown RBP17.33■□□□□ 0.36
COL9A2-202ENST00000372748 ALDH8A1Q9H2A2 487 aaPredicted RBP17.33■□□□□ 0.36
COL9A2-202ENST00000372748 CSB-PGBD3P0DP91 1061 aa17.33■□□□□ 0.36
COL9A2-202ENST00000372748 SNW1Q13573 536 aaKnown RBP17.33■□□□□ 0.36
COL9A2-202ENST00000372748 CCDC73Q6ZRK6 1079 aa17.33■□□□□ 0.36
COL9A2-202ENST00000372748 USP28Q96RU2 1077 aa17.33■□□□□ 0.36
COL9A2-202ENST00000372748 NAP1L2Q9ULW6 460 aaPredicted RBP17.33■□□□□ 0.36
COL9A2-202ENST00000372748 ERICH4A6NGS2 130 aa17.32■□□□□ 0.36
COL9A2-202ENST00000372748 NEMFO60524 1076 aa17.32■□□□□ 0.36
COL9A2-202ENST00000372748 KINO60870 393 aaKnown RBP17.32■□□□□ 0.36
COL9A2-202ENST00000372748 ZSCAN16Q9H4T2 348 aaPredicted RBP17.32■□□□□ 0.36
COL9A2-202ENST00000372748 CYP21A2P08686 494 aa17.32■□□□□ 0.36
COL9A2-202ENST00000372748 ANKRD13DQ6ZTN6 518 aa17.32■□□□□ 0.36
COL9A2-202ENST00000372748 METTL22Q9BUU2 404 aaPredicted RBP17.32■□□□□ 0.36
COL9A2-202ENST00000372748 PHKG2P15735 406 aa17.31■□□□□ 0.36
COL9A2-202ENST00000372748 ME1P48163 572 aa17.31■□□□□ 0.36
COL9A2-202ENST00000372748 CCT2P78371 535 aaKnown RBP17.31■□□□□ 0.36
COL9A2-202ENST00000372748 CHRNA2Q15822 529 aa17.31■□□□□ 0.36
COL9A2-202ENST00000372748 UBE3BQ7Z3V4 1068 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms