RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 LSG1Q9H089 658 aaKnown RBP21.37■■□□□ 1.01
MMP9-201ENST00000372330 NFAT5O94916 1531 aa21.36■■□□□ 1.01
MMP9-201ENST00000372330 STX1AQ16623 288 aa21.36■■□□□ 1.01
MMP9-201ENST00000372330 E4F1Q66K89 784 aaPredicted RBP21.36■■□□□ 1.01
MMP9-201ENST00000372330 UNC5CLQ8IV45 518 aa21.36■■□□□ 1.01
MMP9-201ENST00000372330 RASEFQ8IZ41 740 aa21.36■■□□□ 1.01
MMP9-201ENST00000372330 HDAC5Q9UQL6 1122 aa21.36■■□□□ 1.01
MMP9-201ENST00000372330 PLEKHG2Q9H7P9 1386 aa21.36■■□□□ 1.01
MMP9-201ENST00000372330 MAGEA9P43362 315 aa21.35■■□□□ 1.01
MMP9-201ENST00000372330 PSME1Q06323 249 aa21.35■■□□□ 1.01
MMP9-201ENST00000372330 NBPF6Q5VWK0 638 aa21.35■■□□□ 1.01
MMP9-201ENST00000372330 CCDC150Q8NCX0 1101 aa21.35■■□□□ 1.01
MMP9-201ENST00000372330 MNS1Q8NEH6 495 aa21.35■■□□□ 1.01
MMP9-201ENST00000372330 NBPF4Q96M43 638 aa21.35■■□□□ 1.01
MMP9-201ENST00000372330 PDRG1Q9NUG6 133 aa21.35■■□□□ 1.01
MMP9-201ENST00000372330 LOC102724159A0A0B4J2E5 919 aa21.35■■□□□ 1.01
MMP9-201ENST00000372330 LARGE1O95461 756 aa21.35■■□□□ 1.01
MMP9-201ENST00000372330 PWP2Q15269 919 aaKnown RBP21.35■■□□□ 1.01
MMP9-201ENST00000372330 LEO1Q8WVC0 666 aaPredicted RBP21.35■■□□□ 1.01
MMP9-201ENST00000372330 IL25Q9H293 177 aa21.35■■□□□ 1.01
MMP9-201ENST00000372330 NR1I2O75469 434 aa21.34■■□□□ 1.01
MMP9-201ENST00000372330 TBC1D8O95759 1140 aa21.34■■□□□ 1.01
MMP9-201ENST00000372330 ETF1P62495 437 aaKnown RBP21.34■■□□□ 1.01
MMP9-201ENST00000372330 TTC31Q49AM3 519 aaPredicted RBP21.34■■□□□ 1.01
MMP9-201ENST00000372330 REXO1L1PQ8IX06 675 aa21.34■■□□□ 1.01
MMP9-201ENST00000372330 KCNH5Q8NCM2 988 aa21.34■■□□□ 1.01
MMP9-201ENST00000372330 LARP6Q9BRS8 491 aaKnown RBP21.34■■□□□ 1.01
MMP9-201ENST00000372330 USP44Q9H0E7 712 aa21.34■■□□□ 1.01
MMP9-201ENST00000372330 N4BP2Q86UW6 1770 aaPredicted RBP21.33■■□□□ 1.01
MMP9-201ENST00000372330 BICD2Q8TD16 824 aa21.33■■□□□ 1.01
MMP9-201ENST00000372330 ORAI2Q96SN7 254 aa21.33■■□□□ 1.01
MMP9-201ENST00000372330 RNF216Q9NWF9 866 aaPredicted RBP21.33■■□□□ 1.01
MMP9-201ENST00000372330 ADAM21Q9UKJ8 722 aa21.33■■□□□ 1.01
MMP9-201ENST00000372330 CYP46A1Q9Y6A2 500 aa21.33■■□□□ 1.01
MMP9-201ENST00000372330 GIGYF1O75420 1035 aaPredicted RBP21.33■■□□□ 1
MMP9-201ENST00000372330 GYS2P54840 703 aa21.33■■□□□ 1
MMP9-201ENST00000372330 LEKR1Q6ZMV7 388 aa21.33■■□□□ 1
MMP9-201ENST00000372330 TMX1Q9H3N1 280 aa21.33■■□□□ 1
MMP9-201ENST00000372330 ZSWIM6Q9HCJ5 1215 aa21.33■■□□□ 1
MMP9-201ENST00000372330 TADA3O75528 432 aa21.32■■□□□ 1
MMP9-201ENST00000372330 CC2D1AQ6P1N0 951 aaPredicted RBP21.32■■□□□ 1
MMP9-201ENST00000372330 LRRN4CLQ8ND94 238 aa21.32■■□□□ 1
MMP9-201ENST00000372330 PHAXQ9H814 394 aaKnown RBP21.32■■□□□ 1
MMP9-201ENST00000372330 RGPD2P0DJD1 1756 aa21.32■■□□□ 1
MMP9-201ENST00000372330 UBTFL1P0CB47 393 aaPredicted RBP21.32■■□□□ 1
MMP9-201ENST00000372330 LRRFIP1Q32MZ4 808 aaKnown RBP21.32■■□□□ 1
MMP9-201ENST00000372330 GPR161Q8N6U8 529 aaKnown RBP21.32■■□□□ 1
MMP9-201ENST00000372330 DEF6Q9H4E7 631 aa21.32■■□□□ 1
MMP9-201ENST00000372330 ZCCHC17Q9NP64 241 aaKnown RBP21.32■■□□□ 1
MMP9-201ENST00000372330 MED1Q15648 1581 aaPredicted RBP21.31■■□□□ 1
MMP9-201ENST00000372330 CDC37L1Q7L3B6 337 aa21.31■■□□□ 1
MMP9-201ENST00000372330 ARFGAP3Q9NP61 516 aa21.31■■□□□ 1
MMP9-201ENST00000372330 RPS6KA5O75582 802 aa21.3■■□□□ 1
MMP9-201ENST00000372330 HOXB7P09629 217 aa21.3■■□□□ 1
MMP9-201ENST00000372330 EIF4A1P60842 406 aaKnown RBP21.3■■□□□ 1
MMP9-201ENST00000372330 PROSER2Q86WR7 435 aaPredicted RBP21.3■■□□□ 1
MMP9-201ENST00000372330 NAT10Q9H0A0 1025 aaKnown RBP21.3■■□□□ 1
MMP9-201ENST00000372330 LGR6Q9HBX8 967 aa21.3■■□□□ 1
MMP9-201ENST00000372330 ANO10Q9NW15 660 aa21.3■■□□□ 1
MMP9-201ENST00000372330 DNAI1Q9UI46 699 aa21.3■■□□□ 1
MMP9-201ENST00000372330 TTC41PQ6P2S7 1318 aa21.3■■□□□ 1
MMP9-201ENST00000372330 APPP05067 770 aa21.29■■□□□ 1
MMP9-201ENST00000372330 LMAN1P49257 510 aa21.29■■□□□ 1
MMP9-201ENST00000372330 ME3Q16798 604 aa21.29■■□□□ 1
MMP9-201ENST00000372330 AEBP2Q6ZN18 517 aaPredicted RBP21.29■■□□□ 1
MMP9-201ENST00000372330 FERMT3Q86UX7 667 aa21.29■■□□□ 1
MMP9-201ENST00000372330 HOMER1Q86YM7 354 aa21.29■■□□□ 1
MMP9-201ENST00000372330 LRRC59Q96AG4 307 aaKnown RBP21.29■■□□□ 1
MMP9-201ENST00000372330 SASH3O75995 380 aa21.29■■□□□ 1
MMP9-201ENST00000372330 ATP2B1P20020 1258 aa21.29■■□□□ 1
MMP9-201ENST00000372330 PPM1EQ8WY54 764 aa21.29■■□□□ 1
MMP9-201ENST00000372330 JAKMIP3Q5VZ66 844 aa21.28■■□□□ 1
MMP9-201ENST00000372330 C11orf57Q6ZUT1 292 aaPredicted RBP21.28■■□□□ 1
MMP9-201ENST00000372330 CNTROBQ8N137 903 aa21.28■■□□□ 1
MMP9-201ENST00000372330 SSH3Q8TE77 659 aa21.28■■□□□ 1
MMP9-201ENST00000372330 KCNB2Q92953 911 aa21.28■■□□□ 1
MMP9-201ENST00000372330 PHRF1Q9P1Y6 1649 aaKnown RBP21.28■■□□□ 1
MMP9-201ENST00000372330 SEC31AO94979 1220 aaKnown RBP21.28■■□□□ 1
MMP9-201ENST00000372330 EIF2S2P20042 333 aaKnown RBP21.28■■□□□ 1
MMP9-201ENST00000372330 SFPQP23246 707 aaKnown RBP eCLIP21.28■■□□□ 1
MMP9-201ENST00000372330 ZNF622Q969S3 477 aaKnown RBP eCLIP21.28■■□□□ 1
MMP9-201ENST00000372330 PGBD1Q96JS3 809 aa21.28■■□□□ 1
MMP9-201ENST00000372330 TFIP11Q9UBB9 837 aaKnown RBP21.28■■□□□ 1
MMP9-201ENST00000372330 BRD2P25440 801 aaKnown RBP21.27■■□□□ 1
MMP9-201ENST00000372330 ST3GAL1Q11201 340 aa21.27■■□□□ 1
MMP9-201ENST00000372330 FAM173BQ6P4H8 233 aa21.27■■□□□ 1
MMP9-201ENST00000372330 DHX40Q8IX18 779 aaKnown RBP21.27■■□□□ 1
MMP9-201ENST00000372330 JAKMIP1Q96N16 626 aaKnown RBP21.27■■□□□ 1
MMP9-201ENST00000372330 KCNQ3O43525 872 aa21.27■□□□□ 0.99
MMP9-201ENST00000372330 AKAP4Q5JQC9 854 aa21.27■□□□□ 0.99
MMP9-201ENST00000372330 CEP57L1Q8IYX8 460 aa21.27■□□□□ 0.99
MMP9-201ENST00000372330 RUFY2Q8WXA3 655 aa21.27■□□□□ 0.99
MMP9-201ENST00000372330 CHMP4CQ96CF2 233 aa21.27■□□□□ 0.99
MMP9-201ENST00000372330 MKRN1Q9UHC7 482 aaKnown RBP21.27■□□□□ 0.99
MMP9-201ENST00000372330 SUGP1Q8IWZ8 645 aaKnown RBP21.26■□□□□ 0.99
MMP9-201ENST00000372330 CFAP45Q9UL16 551 aa21.26■□□□□ 0.99
MMP9-201ENST00000372330 EVCP57679 992 aa21.26■□□□□ 0.99
MMP9-201ENST00000372330 TEFQ10587 303 aa21.26■□□□□ 0.99
MMP9-201ENST00000372330 SWT1Q5T5J6 900 aaKnown RBP21.26■□□□□ 0.99
MMP9-201ENST00000372330 FUT8Q9BYC5 575 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms