RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 TYRO3Q06418 890 aa22.64■■□□□ 1.21
TMEM53-202ENST00000372237 MRVI1Q9Y6F6 885 aa22.63■■□□□ 1.21
TMEM53-202ENST00000372237 LMBR1LQ6UX01 489 aa22.63■■□□□ 1.21
TMEM53-202ENST00000372237 CKAP2LQ8IYA6 745 aa22.63■■□□□ 1.21
TMEM53-202ENST00000372237 C17orf53Q8N3J3 647 aaPredicted RBP22.63■■□□□ 1.21
TMEM53-202ENST00000372237 PLBD2Q8NHP8 589 aa22.63■■□□□ 1.21
TMEM53-202ENST00000372237 MAP7D2Q96T17 732 aa22.63■■□□□ 1.21
TMEM53-202ENST00000372237 DDX19AQ9NUU7 478 aaKnown RBP22.63■■□□□ 1.21
TMEM53-202ENST00000372237 CABP4P57796 275 aa22.62■■□□□ 1.21
TMEM53-202ENST00000372237 BRF1Q92994 677 aa22.62■■□□□ 1.21
TMEM53-202ENST00000372237 CCDC9Q9Y3X0 531 aaKnown RBP22.62■■□□□ 1.21
TMEM53-202ENST00000372237 GOLGA6L6A8MZA4 724 aa22.62■■□□□ 1.21
TMEM53-202ENST00000372237 FGD1P98174 961 aa22.62■■□□□ 1.21
TMEM53-202ENST00000372237 ABCC6O95255 1503 aa22.61■■□□□ 1.21
TMEM53-202ENST00000372237 H3BQV1 296 aa22.61■■□□□ 1.21
TMEM53-202ENST00000372237 TPM3P06753 285 aa22.61■■□□□ 1.21
TMEM53-202ENST00000372237 CASP7P55210 303 aa22.61■■□□□ 1.21
TMEM53-202ENST00000372237 IFFO2Q5TF58 517 aa22.61■■□□□ 1.21
TMEM53-202ENST00000372237 KBTBD3Q8NAB2 608 aa22.61■■□□□ 1.21
TMEM53-202ENST00000372237 SPC24Q8NBT2 197 aa22.61■■□□□ 1.21
TMEM53-202ENST00000372237 BICD2Q8TD16 824 aa22.6■■□□□ 1.21
TMEM53-202ENST00000372237 LUZP1Q86V48 1076 aa22.6■■□□□ 1.21
TMEM53-202ENST00000372237 DDX11Q96FC9 970 aa22.6■■□□□ 1.21
TMEM53-202ENST00000372237 PRIMPOLQ96LW4 560 aa22.6■■□□□ 1.21
TMEM53-202ENST00000372237 SPTLC3Q9NUV7 552 aa22.6■■□□□ 1.21
TMEM53-202ENST00000372237 MYRIPQ8NFW9 859 aa22.59■■□□□ 1.21
TMEM53-202ENST00000372237 NEUROD6Q96NK8 337 aa22.59■■□□□ 1.21
TMEM53-202ENST00000372237 LRRC2Q9BYS8 371 aa22.59■■□□□ 1.21
TMEM53-202ENST00000372237 SH3TC1Q8TE82 1336 aa22.59■■□□□ 1.21
TMEM53-202ENST00000372237 PRDM11Q9NQV5 511 aa22.59■■□□□ 1.21
TMEM53-202ENST00000372237 HMGN5P82970 282 aaKnown RBP22.58■■□□□ 1.21
TMEM53-202ENST00000372237 SCRN1Q12765 414 aa22.58■■□□□ 1.21
TMEM53-202ENST00000372237 RESTQ13127 1097 aa22.58■■□□□ 1.21
TMEM53-202ENST00000372237 ANO6Q4KMQ2 910 aa22.58■■□□□ 1.21
TMEM53-202ENST00000372237 CLSTN2Q9H4D0 955 aa22.58■■□□□ 1.21
TMEM53-202ENST00000372237 ZSCAN16Q9H4T2 348 aaPredicted RBP22.58■■□□□ 1.21
TMEM53-202ENST00000372237 NR1I2O75469 434 aa22.58■■□□□ 1.2
TMEM53-202ENST00000372237 HMGB1P09429 215 aaKnown RBP22.58■■□□□ 1.2
TMEM53-202ENST00000372237 PGBD1Q96JS3 809 aa22.58■■□□□ 1.2
TMEM53-202ENST00000372237 KCNF1Q9H3M0 494 aa22.58■■□□□ 1.2
TMEM53-202ENST00000372237 GOLIM4O00461 696 aa22.57■■□□□ 1.2
TMEM53-202ENST00000372237 RBM43Q6ZSC3 357 aaKnown RBP22.57■■□□□ 1.2
TMEM53-202ENST00000372237 PLEKHG2Q9H7P9 1386 aa22.57■■□□□ 1.2
TMEM53-202ENST00000372237 FOXO4P98177 505 aa22.57■■□□□ 1.2
TMEM53-202ENST00000372237 STOX1Q6ZVD7 989 aa22.57■■□□□ 1.2
TMEM53-202ENST00000372237 MTERF4Q7Z6M4 381 aaKnown RBP22.57■■□□□ 1.2
TMEM53-202ENST00000372237 KIAA1524Q8TCG1 905 aa22.57■■□□□ 1.2
TMEM53-202ENST00000372237 PAG1Q9NWQ8 432 aa22.57■■□□□ 1.2
TMEM53-202ENST00000372237 CFAP45Q9UL16 551 aa22.57■■□□□ 1.2
TMEM53-202ENST00000372237 PALLDQ8WX93 1383 aa22.56■■□□□ 1.2
TMEM53-202ENST00000372237 CBX8Q9HC52 389 aa22.56■■□□□ 1.2
TMEM53-202ENST00000372237 LAMB4A4D0S4 1761 aa22.56■■□□□ 1.2
TMEM53-202ENST00000372237 PKD1L3Q7Z443 1732 aa22.56■■□□□ 1.2
TMEM53-202ENST00000372237 H7C1W4 665 aa22.56■■□□□ 1.2
TMEM53-202ENST00000372237 DHX32Q7L7V1 743 aaKnown RBP22.56■■□□□ 1.2
TMEM53-202ENST00000372237 VSIG10Q8N0Z9 540 aa22.56■■□□□ 1.2
TMEM53-202ENST00000372237 LLPHQ9BRT6 129 aaKnown RBP22.56■■□□□ 1.2
TMEM53-202ENST00000372237 HELLSQ9NRZ9 838 aa22.56■■□□□ 1.2
TMEM53-202ENST00000372237 ATG9AQ7Z3C6 839 aa22.55■■□□□ 1.2
TMEM53-202ENST00000372237 SMARCC2Q8TAQ2 1214 aa22.55■■□□□ 1.2
TMEM53-202ENST00000372237 PFKFB2O60825 505 aa22.54■■□□□ 1.2
TMEM53-202ENST00000372237 TIMM10P62072 90 aa22.54■■□□□ 1.2
TMEM53-202ENST00000372237 PYCARDQ9ULZ3 195 aa22.54■■□□□ 1.2
TMEM53-202ENST00000372237 LAMA4Q16363 1823 aa22.54■■□□□ 1.2
TMEM53-202ENST00000372237 SLFNL1Q499Z3 407 aa22.54■■□□□ 1.2
TMEM53-202ENST00000372237 DSCC1Q9BVC3 393 aa22.54■■□□□ 1.2
TMEM53-202ENST00000372237 CWC25Q9NXE8 425 aaPredicted RBP22.54■■□□□ 1.2
TMEM53-202ENST00000372237 NBPF26B4DH59 902 aa22.53■■□□□ 1.2
TMEM53-202ENST00000372237 NBPF14Q5TI25 921 aa22.53■■□□□ 1.2
TMEM53-202ENST00000372237 NBPF10Q6P3W6 841 aaKnown RBP22.53■■□□□ 1.2
TMEM53-202ENST00000372237 NBPF15Q8N660 670 aa22.53■■□□□ 1.2
TMEM53-202ENST00000372237 IL15P40933 162 aaPredicted RBP22.53■■□□□ 1.2
TMEM53-202ENST00000372237 GPR108Q9NPR9 543 aa22.53■■□□□ 1.2
TMEM53-202ENST00000372237 WDR17Q8IZU2 1322 aa22.53■■□□□ 1.2
TMEM53-202ENST00000372237 CEBPZQ03701 1054 aaKnown RBP22.52■■□□□ 1.2
TMEM53-202ENST00000372237 APOBRQ0VD83 1088 aa22.52■■□□□ 1.2
TMEM53-202ENST00000372237 NSUN7Q8NE18 718 aaKnown RBP22.52■■□□□ 1.2
TMEM53-202ENST00000372237 GLI3P10071 1580 aa22.52■■□□□ 1.2
TMEM53-202ENST00000372237 ZNF165P49910 485 aa22.52■■□□□ 1.2
TMEM53-202ENST00000372237 TTLL7Q6ZT98 887 aa22.52■■□□□ 1.2
TMEM53-202ENST00000372237 KIF3AQ9Y496 699 aa22.52■■□□□ 1.2
TMEM53-202ENST00000372237 ZMYM1Q5SVZ6 1142 aa22.51■■□□□ 1.19
TMEM53-202ENST00000372237 NAA16Q6N069 864 aaPredicted RBP22.51■■□□□ 1.19
TMEM53-202ENST00000372237 TRIM5Q9C035 493 aa22.51■■□□□ 1.19
TMEM53-202ENST00000372237 PTPDC1A2A3K4 754 aa22.51■■□□□ 1.19
TMEM53-202ENST00000372237 PTGS1P23219 599 aa22.51■■□□□ 1.19
TMEM53-202ENST00000372237 FOSBP53539 338 aa22.51■■□□□ 1.19
TMEM53-202ENST00000372237 TOM1L2Q6ZVM7 507 aa22.51■■□□□ 1.19
TMEM53-202ENST00000372237 DRC7Q8IY82 874 aa22.51■■□□□ 1.19
TMEM53-202ENST00000372237 DNAJC25Q9H1X3 360 aa22.51■■□□□ 1.19
TMEM53-202ENST00000372237 HSPD1P10809 573 aaKnown RBP22.5■■□□□ 1.19
TMEM53-202ENST00000372237 GTF2F1P35269 517 aaKnown RBP eCLIP22.5■■□□□ 1.19
TMEM53-202ENST00000372237 TDRD7Q8NHU6 1098 aaKnown RBP22.5■■□□□ 1.19
TMEM53-202ENST00000372237 IFIT1P09914 478 aaKnown RBP22.49■■□□□ 1.19
TMEM53-202ENST00000372237 CCT2P78371 535 aaKnown RBP22.49■■□□□ 1.19
TMEM53-202ENST00000372237 EXOSC10Q01780 885 aaKnown RBP22.49■■□□□ 1.19
TMEM53-202ENST00000372237 LRRC24Q50LG9 513 aa22.49■■□□□ 1.19
TMEM53-202ENST00000372237 TICAM2Q86XR7 235 aa22.49■■□□□ 1.19
TMEM53-202ENST00000372237 NAP1L2Q9ULW6 460 aaPredicted RBP22.49■■□□□ 1.19
TMEM53-202ENST00000372237 E7EWF7 191 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms