RNA–Protein interactions for RNA: ENST00000372108.9

GTF3C5-204, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-204ENST00000372108 NBR1Q14596 966 aa18.83■□□□□ 0.6
GTF3C5-204ENST00000372108 ATP2B3Q16720 1220 aa18.83■□□□□ 0.6
GTF3C5-204ENST00000372108 DDX46Q7L014 1031 aaKnown RBP18.83■□□□□ 0.6
GTF3C5-204ENST00000372108 UBE2Q2Q8WVN8 375 aa18.83■□□□□ 0.6
GTF3C5-204ENST00000372108 TRIM37O94972 964 aa18.82■□□□□ 0.6
GTF3C5-204ENST00000372108 ZNF772Q68DY9 489 aaPredicted RBP18.82■□□□□ 0.6
GTF3C5-204ENST00000372108 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.82■□□□□ 0.6
GTF3C5-204ENST00000372108 PAG1Q9NWQ8 432 aa18.82■□□□□ 0.6
GTF3C5-204ENST00000372108 RFX7Q2KHR2 1363 aa18.82■□□□□ 0.6
GTF3C5-204ENST00000372108 PDE8BO95263 885 aa18.82■□□□□ 0.6
GTF3C5-204ENST00000372108 IFIT1P09914 478 aaKnown RBP18.82■□□□□ 0.6
GTF3C5-204ENST00000372108 RBM6P78332 1123 aaKnown RBP18.82■□□□□ 0.6
GTF3C5-204ENST00000372108 KBTBD3Q8NAB2 608 aa18.82■□□□□ 0.6
GTF3C5-204ENST00000372108 GOLIM4O00461 696 aa18.81■□□□□ 0.6
GTF3C5-204ENST00000372108 CCDC158Q5M9N0 1113 aa18.81■□□□□ 0.6
GTF3C5-204ENST00000372108 GORABQ5T7V8 394 aa18.81■□□□□ 0.6
GTF3C5-204ENST00000372108 MROH5Q6ZUA9 1318 aa18.8■□□□□ 0.6
GTF3C5-204ENST00000372108 ST18O60284 1047 aa18.8■□□□□ 0.6
GTF3C5-204ENST00000372108 C3orf67Q6ZVT6 689 aa18.8■□□□□ 0.6
GTF3C5-204ENST00000372108 SETDB2Q96T68 719 aa18.8■□□□□ 0.6
GTF3C5-204ENST00000372108 MED23Q9ULK4 1368 aa18.8■□□□□ 0.6
GTF3C5-204ENST00000372108 CCDC171Q6TFL3 1326 aa18.8■□□□□ 0.6
GTF3C5-204ENST00000372108 PHF14O94880 888 aa18.8■□□□□ 0.6
GTF3C5-204ENST00000372108 CHGBP05060 677 aa18.8■□□□□ 0.6
GTF3C5-204ENST00000372108 SLC10A5Q5PT55 438 aa18.8■□□□□ 0.6
GTF3C5-204ENST00000372108 TTC39AQ5SRH9 613 aa18.8■□□□□ 0.6
GTF3C5-204ENST00000372108 TRAPPC3LQ5T215 181 aa18.8■□□□□ 0.6
GTF3C5-204ENST00000372108 NEK4P51957 841 aa18.79■□□□□ 0.6
GTF3C5-204ENST00000372108 MPHOSPH8Q99549 860 aa18.79■□□□□ 0.6
GTF3C5-204ENST00000372108 SNX14Q9Y5W7 946 aa18.79■□□□□ 0.6
GTF3C5-204ENST00000372108 RFC4P35249 363 aa18.79■□□□□ 0.6
GTF3C5-204ENST00000372108 SF3B3Q15393 1217 aaKnown RBP18.79■□□□□ 0.6
GTF3C5-204ENST00000372108 SLC27A3Q5K4L6 730 aa18.79■□□□□ 0.6
GTF3C5-204ENST00000372108 ZNF589Q86UQ0 364 aaPredicted RBP18.79■□□□□ 0.6
GTF3C5-204ENST00000372108 RASEFQ8IZ41 740 aa18.79■□□□□ 0.6
GTF3C5-204ENST00000372108 HELBQ8NG08 1087 aaPredicted RBP18.79■□□□□ 0.6
GTF3C5-204ENST00000372108 C4AP0C0L4 1744 aa18.79■□□□□ 0.6
GTF3C5-204ENST00000372108 COL24A1Q17RW2 1714 aa18.78■□□□□ 0.6
GTF3C5-204ENST00000372108 DDIT3P35638 169 aa18.78■□□□□ 0.6
GTF3C5-204ENST00000372108 SCARF1Q14162 830 aa18.78■□□□□ 0.6
GTF3C5-204ENST00000372108 MAP4K1Q92918 833 aa18.78■□□□□ 0.6
GTF3C5-204ENST00000372108 NYXQ9GZU5 481 aa18.78■□□□□ 0.6
GTF3C5-204ENST00000372108 ABCC12Q96J65 1359 aa18.78■□□□□ 0.6
GTF3C5-204ENST00000372108 FGFR2P21802 821 aa18.77■□□□□ 0.6
GTF3C5-204ENST00000372108 TICAM2Q86XR7 235 aa18.77■□□□□ 0.6
GTF3C5-204ENST00000372108 COL4A1P02462 1669 aa18.77■□□□□ 0.6
GTF3C5-204ENST00000372108 GTF2E1P29083 439 aaPredicted RBP18.77■□□□□ 0.6
GTF3C5-204ENST00000372108 IGHMBP2P38935 993 aaKnown RBP18.77■□□□□ 0.6
GTF3C5-204ENST00000372108 FKBP4Q02790 459 aaKnown RBP eCLIP18.77■□□□□ 0.6
GTF3C5-204ENST00000372108 NECTIN1Q15223 517 aa18.77■□□□□ 0.6
GTF3C5-204ENST00000372108 PUM3Q15397 648 aaKnown RBP18.77■□□□□ 0.6
GTF3C5-204ENST00000372108 NBPF5PQ86XG9 351 aaPredicted RBP18.77■□□□□ 0.6
GTF3C5-204ENST00000372108 KCNB2Q92953 911 aa18.77■□□□□ 0.6
GTF3C5-204ENST00000372108 SPEF2Q9C093 1822 aa18.77■□□□□ 0.59
GTF3C5-204ENST00000372108 LPIN2Q92539 896 aa18.76■□□□□ 0.59
GTF3C5-204ENST00000372108 ADRA2BP18089 450 aa18.76■□□□□ 0.59
GTF3C5-204ENST00000372108 NFKBIBQ15653 356 aa18.76■□□□□ 0.59
GTF3C5-204ENST00000372108 PRPF40BQ6NWY9 871 aaKnown RBP18.76■□□□□ 0.59
GTF3C5-204ENST00000372108 ZNF512BQ96KM6 892 aaPredicted RBP18.76■□□□□ 0.59
GTF3C5-204ENST00000372108 SEC62Q99442 399 aaKnown RBP18.76■□□□□ 0.59
GTF3C5-204ENST00000372108 RBM8AQ9Y5S9 174 aaKnown RBP18.76■□□□□ 0.59
GTF3C5-204ENST00000372108 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.75■□□□□ 0.59
GTF3C5-204ENST00000372108 TAF5LO75529 589 aa18.75■□□□□ 0.59
GTF3C5-204ENST00000372108 HSP90AA1P07900 732 aaKnown RBP18.75■□□□□ 0.59
GTF3C5-204ENST00000372108 MCMDC2Q4G0Z9 681 aa18.75■□□□□ 0.59
GTF3C5-204ENST00000372108 CDC5LQ99459 802 aaKnown RBP18.75■□□□□ 0.59
GTF3C5-204ENST00000372108 UPF3BQ9BZI7 483 aaKnown RBP18.75■□□□□ 0.59
GTF3C5-204ENST00000372108 FOXD4L1Q9NU39 408 aa18.75■□□□□ 0.59
GTF3C5-204ENST00000372108 CHMP5Q9NZZ3 219 aa18.75■□□□□ 0.59
GTF3C5-204ENST00000372108 ZAP70P43403 619 aa18.74■□□□□ 0.59
GTF3C5-204ENST00000372108 SLFNL1Q499Z3 407 aa18.74■□□□□ 0.59
GTF3C5-204ENST00000372108 TPTE2Q6XPS3 522 aa18.74■□□□□ 0.59
GTF3C5-204ENST00000372108 PROM2Q8N271 834 aa18.74■□□□□ 0.59
GTF3C5-204ENST00000372108 CASZ1Q86V15 1759 aa18.74■□□□□ 0.59
GTF3C5-204ENST00000372108 UBR3Q6ZT12 1888 aa18.74■□□□□ 0.59
GTF3C5-204ENST00000372108 SNAP23O00161 211 aa18.74■□□□□ 0.59
GTF3C5-204ENST00000372108 MCAMP43121 646 aa18.74■□□□□ 0.59
GTF3C5-204ENST00000372108 PI16Q6UXB8 463 aa18.74■□□□□ 0.59
GTF3C5-204ENST00000372108 CCDC129Q6ZRS4 1044 aa18.74■□□□□ 0.59
GTF3C5-204ENST00000372108 CREB3L3Q68CJ9 461 aa18.73■□□□□ 0.59
GTF3C5-204ENST00000372108 CCDC102BQ68D86 513 aa18.73■□□□□ 0.59
GTF3C5-204ENST00000372108 RNF113AO15541 343 aaKnown RBP18.73■□□□□ 0.59
GTF3C5-204ENST00000372108 PHKA1P46020 1223 aa18.73■□□□□ 0.59
GTF3C5-204ENST00000372108 MCM2P49736 904 aa18.73■□□□□ 0.59
GTF3C5-204ENST00000372108 ZMYM1Q5SVZ6 1142 aa18.73■□□□□ 0.59
GTF3C5-204ENST00000372108 ANKRD18AQ8IVF6 992 aa18.73■□□□□ 0.59
GTF3C5-204ENST00000372108 CCDC24Q8N4L8 307 aa18.73■□□□□ 0.59
GTF3C5-204ENST00000372108 HELLSQ9NRZ9 838 aa18.73■□□□□ 0.59
GTF3C5-204ENST00000372108 ARAP2Q8WZ64 1704 aa18.72■□□□□ 0.59
GTF3C5-204ENST00000372108 AKAP11Q9UKA4 1901 aa18.72■□□□□ 0.59
GTF3C5-204ENST00000372108 SLC5A1P13866 664 aa18.72■□□□□ 0.59
GTF3C5-204ENST00000372108 SSFA2P28290 1259 aa18.72■□□□□ 0.59
GTF3C5-204ENST00000372108 KCNJ4P48050 445 aa18.72■□□□□ 0.59
GTF3C5-204ENST00000372108 CHRNDQ07001 517 aa18.72■□□□□ 0.59
GTF3C5-204ENST00000372108 NFIXQ14938 502 aa18.72■□□□□ 0.59
GTF3C5-204ENST00000372108 TXNRD1Q16881 649 aa18.72■□□□□ 0.59
GTF3C5-204ENST00000372108 NLRP3Q96P20 1036 aa18.72■□□□□ 0.59
GTF3C5-204ENST00000372108 TAF1P21675 1872 aa18.72■□□□□ 0.59
GTF3C5-204ENST00000372108 SLC27A2O14975 620 aa18.71■□□□□ 0.59
GTF3C5-204ENST00000372108 ARID4AP29374 1257 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms