RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 PARP3Q9Y6F1 533 aa22.55■■□□□ 1.2
VEGFA-206ENST00000372077 FPGT-TNNI3KV9GXZ4 949 aa22.55■■□□□ 1.2
VEGFA-206ENST00000372077 AOX1Q06278 1338 aa22.54■■□□□ 1.2
VEGFA-206ENST00000372077 BMP2KLQ5H9B9 411 aa22.54■■□□□ 1.2
VEGFA-206ENST00000372077 COL4A1P02462 1669 aa22.54■■□□□ 1.2
VEGFA-206ENST00000372077 CNNM1Q9NRU3 951 aa22.54■■□□□ 1.2
VEGFA-206ENST00000372077 CEP126Q9P2H0 1117 aa22.54■■□□□ 1.2
VEGFA-206ENST00000372077 IFIT2P09913 472 aaKnown RBP22.53■■□□□ 1.2
VEGFA-206ENST00000372077 TTC22Q5TAA0 569 aa22.53■■□□□ 1.2
VEGFA-206ENST00000372077 SLC16A10Q8TF71 515 aa22.53■■□□□ 1.2
VEGFA-206ENST00000372077 PDGFDQ9GZP0 370 aaPredicted RBP22.53■■□□□ 1.2
VEGFA-206ENST00000372077 GZF1Q9H116 711 aaPredicted RBP22.53■■□□□ 1.2
VEGFA-206ENST00000372077 KLRG2A4D1S0 409 aaPredicted RBP22.53■■□□□ 1.2
VEGFA-206ENST00000372077 IGHMBP2P38935 993 aaKnown RBP22.53■■□□□ 1.2
VEGFA-206ENST00000372077 CRY2Q49AN0 593 aa22.53■■□□□ 1.2
VEGFA-206ENST00000372077 MPHOSPH8Q99549 860 aa22.52■■□□□ 1.2
VEGFA-206ENST00000372077 GSPT1P15170 499 aaKnown RBP22.52■■□□□ 1.2
VEGFA-206ENST00000372077 VGLL2Q8N8G2 317 aa22.52■■□□□ 1.2
VEGFA-206ENST00000372077 CCDC8Q9H0W5 538 aaPredicted RBP22.52■■□□□ 1.2
VEGFA-206ENST00000372077 TTC41PQ6P2S7 1318 aa22.51■■□□□ 1.19
VEGFA-206ENST00000372077 ANKRD18AQ8IVF6 992 aa22.51■■□□□ 1.19
VEGFA-206ENST00000372077 MROH5Q6ZUA9 1318 aa22.51■■□□□ 1.19
VEGFA-206ENST00000372077 BRIP1Q9BX63 1249 aa22.51■■□□□ 1.19
VEGFA-206ENST00000372077 METTL24Q5JXM2 366 aa22.5■■□□□ 1.19
VEGFA-206ENST00000372077 CELF1Q92879 486 aaKnown RBP22.5■■□□□ 1.19
VEGFA-206ENST00000372077 ZNF609O15014 1411 aa22.5■■□□□ 1.19
VEGFA-206ENST00000372077 DDX46Q7L014 1031 aaKnown RBP22.5■■□□□ 1.19
VEGFA-206ENST00000372077 PI4K2BQ8TCG2 481 aa22.5■■□□□ 1.19
VEGFA-206ENST00000372077 BSDC1Q9NW68 430 aaPredicted RBP22.5■■□□□ 1.19
VEGFA-206ENST00000372077 TLR7Q9NYK1 1049 aaKnown RBP22.5■■□□□ 1.19
VEGFA-206ENST00000372077 AKAP2Q9Y2D5 859 aa22.5■■□□□ 1.19
VEGFA-206ENST00000372077 ANKRD31Q8N7Z5 1873 aa22.5■■□□□ 1.19
VEGFA-206ENST00000372077 TSHZ3Q63HK5 1081 aa22.49■■□□□ 1.19
VEGFA-206ENST00000372077 TAF1P21675 1872 aa22.49■■□□□ 1.19
VEGFA-206ENST00000372077 SPEF2Q9C093 1822 aa22.49■■□□□ 1.19
VEGFA-206ENST00000372077 RPS8P62241 208 aaKnown RBP22.49■■□□□ 1.19
VEGFA-206ENST00000372077 ECHDC1Q9NTX5 307 aa22.49■■□□□ 1.19
VEGFA-206ENST00000372077 DBNLQ9UJU6 430 aaKnown RBP22.49■■□□□ 1.19
VEGFA-206ENST00000372077 FOXD4L1Q9NU39 408 aa22.49■■□□□ 1.19
VEGFA-206ENST00000372077 PDE8BO95263 885 aa22.48■■□□□ 1.19
VEGFA-206ENST00000372077 GPATCH3Q96I76 525 aa22.48■■□□□ 1.19
VEGFA-206ENST00000372077 HOXA10P31260 410 aaPredicted RBP22.47■■□□□ 1.19
VEGFA-206ENST00000372077 TIMM10P62072 90 aa22.47■■□□□ 1.19
VEGFA-206ENST00000372077 A0A1B0GUL7 405 aa22.47■■□□□ 1.19
VEGFA-206ENST00000372077 DBNDD2Q9BQY9 259 aa22.47■■□□□ 1.19
VEGFA-206ENST00000372077 TBC1D2Q9BYX2 928 aa22.47■■□□□ 1.19
VEGFA-206ENST00000372077 UPF2Q9HAU5 1272 aaKnown RBP22.47■■□□□ 1.19
VEGFA-206ENST00000372077 GRAPQ13588 217 aa22.46■■□□□ 1.19
VEGFA-206ENST00000372077 GRAPLQ8TC17 118 aaPredicted RBP22.46■■□□□ 1.19
VEGFA-206ENST00000372077 RPGRQ92834 1020 aaKnown RBP22.46■■□□□ 1.19
VEGFA-206ENST00000372077 ERC2O15083 957 aa22.45■■□□□ 1.18
VEGFA-206ENST00000372077 GLRX3O76003 335 aaKnown RBP22.45■■□□□ 1.18
VEGFA-206ENST00000372077 FGFR2P21802 821 aa22.45■■□□□ 1.18
VEGFA-206ENST00000372077 RBM17Q96I25 401 aaKnown RBP22.45■■□□□ 1.18
VEGFA-206ENST00000372077 NEUROD6Q96NK8 337 aa22.45■■□□□ 1.18
VEGFA-206ENST00000372077 SDSP20132 328 aa22.44■■□□□ 1.18
VEGFA-206ENST00000372077 CHRNDQ07001 517 aa22.44■■□□□ 1.18
VEGFA-206ENST00000372077 ATP2B3Q16720 1220 aa22.44■■□□□ 1.18
VEGFA-206ENST00000372077 MINPP1Q9UNW1 487 aa22.44■■□□□ 1.18
VEGFA-206ENST00000372077 PDE6BP35913 854 aa22.44■■□□□ 1.18
VEGFA-206ENST00000372077 CRAMP1Q96RY5 1269 aa22.44■■□□□ 1.18
VEGFA-206ENST00000372077 HELBQ8NG08 1087 aaPredicted RBP22.44■■□□□ 1.18
VEGFA-206ENST00000372077 A0A1B0GUL6 1792 aa22.43■■□□□ 1.18
VEGFA-206ENST00000372077 ATP5JP18859 108 aa22.43■■□□□ 1.18
VEGFA-206ENST00000372077 PUM3Q15397 648 aaKnown RBP22.43■■□□□ 1.18
VEGFA-206ENST00000372077 XAGE2Q96GT9 111 aa22.42■■□□□ 1.18
VEGFA-206ENST00000372077 SRGNP10124 158 aa22.42■■□□□ 1.18
VEGFA-206ENST00000372077 LPIN2Q92539 896 aa22.42■■□□□ 1.18
VEGFA-206ENST00000372077 TAF5LO75529 589 aa22.41■■□□□ 1.18
VEGFA-206ENST00000372077 BECN1Q14457 450 aa22.41■■□□□ 1.18
VEGFA-206ENST00000372077 R3HDM1Q15032 1099 aaKnown RBP22.41■■□□□ 1.18
VEGFA-206ENST00000372077 NPR1P16066 1061 aa22.4■■□□□ 1.18
VEGFA-206ENST00000372077 ADORA1P30542 326 aa22.4■■□□□ 1.18
VEGFA-206ENST00000372077 BBOX1O75936 387 aa22.4■■□□□ 1.18
VEGFA-206ENST00000372077 ILDR2Q71H61 639 aa22.4■■□□□ 1.18
VEGFA-206ENST00000372077 ARAP2Q8WZ64 1704 aa22.4■■□□□ 1.18
VEGFA-206ENST00000372077 ANKRD2Q9GZV1 360 aa22.39■■□□□ 1.17
VEGFA-206ENST00000372077 COL11A2P13942 1736 aaPredicted RBP22.39■■□□□ 1.17
VEGFA-206ENST00000372077 TBC1D32Q96NH3 1257 aa22.39■■□□□ 1.17
VEGFA-206ENST00000372077 MTFR1LQ9H019 292 aa22.39■■□□□ 1.17
VEGFA-206ENST00000372077 SLC5A1P13866 664 aa22.38■■□□□ 1.17
VEGFA-206ENST00000372077 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.38■■□□□ 1.17
VEGFA-206ENST00000372077 CDC45O75419 566 aa22.38■■□□□ 1.17
VEGFA-206ENST00000372077 UBE4AQ14139 1066 aa22.38■■□□□ 1.17
VEGFA-206ENST00000372077 BOLA2Q9H3K6 86 aa22.38■■□□□ 1.17
VEGFA-206ENST00000372077 C10orf71Q711Q0 1435 aa22.38■■□□□ 1.17
VEGFA-206ENST00000372077 MASTLQ96GX5 879 aa22.37■■□□□ 1.17
VEGFA-206ENST00000372077 C22orf23Q9BZE7 217 aa22.37■■□□□ 1.17
VEGFA-206ENST00000372077 TRIM6-TRIM34B2RNG4 842 aa22.37■■□□□ 1.17
VEGFA-206ENST00000372077 SNAP23O00161 211 aa22.37■■□□□ 1.17
VEGFA-206ENST00000372077 ZBTB7AO95365 584 aa22.37■■□□□ 1.17
VEGFA-206ENST00000372077 CCDC158Q5M9N0 1113 aa22.37■■□□□ 1.17
VEGFA-206ENST00000372077 IFIT1P09914 478 aaKnown RBP22.36■■□□□ 1.17
VEGFA-206ENST00000372077 TMC4Q7Z404 712 aa22.36■■□□□ 1.17
VEGFA-206ENST00000372077 ZNF512BQ96KM6 892 aaPredicted RBP22.36■■□□□ 1.17
VEGFA-206ENST00000372077 MAP4K4O95819 1239 aaPredicted RBP22.36■■□□□ 1.17
VEGFA-206ENST00000372077 ALDH1B1P30837 517 aa22.36■■□□□ 1.17
VEGFA-206ENST00000372077 GORABQ5T7V8 394 aa22.36■■□□□ 1.17
VEGFA-206ENST00000372077 CNTROBQ8N137 903 aa22.36■■□□□ 1.17
VEGFA-206ENST00000372077 RILPL2Q969X0 211 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms