RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 RPGRQ92834 1020 aaKnown RBP13.5□□□□□ -0.25
EXOSC1-203ENST00000370886 CCDC85AQ96PX6 553 aaPredicted RBP13.5□□□□□ -0.25
EXOSC1-203ENST00000370886 TLL2Q9Y6L7 1015 aa13.5□□□□□ -0.25
EXOSC1-203ENST00000370886 ALDH1L1O75891 902 aa13.49□□□□□ -0.25
EXOSC1-203ENST00000370886 CCT4P50991 539 aaKnown RBP13.49□□□□□ -0.25
EXOSC1-203ENST00000370886 GRIPAP1Q4V328 841 aa13.49□□□□□ -0.25
EXOSC1-203ENST00000370886 OLFM4Q6UX06 510 aa13.49□□□□□ -0.25
EXOSC1-203ENST00000370886 USP50Q70EL3 339 aaPredicted RBP13.49□□□□□ -0.25
EXOSC1-203ENST00000370886 POTEDQ86YR6 584 aa13.49□□□□□ -0.25
EXOSC1-203ENST00000370886 MCOLN1Q9GZU1 580 aa13.49□□□□□ -0.25
EXOSC1-203ENST00000370886 SNED1Q8TER0 1413 aa13.48□□□□□ -0.25
EXOSC1-203ENST00000370886 SCNN1DP51172 638 aa13.48□□□□□ -0.25
EXOSC1-203ENST00000370886 SLC10A5Q5PT55 438 aa13.48□□□□□ -0.25
EXOSC1-203ENST00000370886 DZIP1LQ8IYY4 767 aaKnown RBP13.48□□□□□ -0.25
EXOSC1-203ENST00000370886 PANK1Q8TE04 598 aa13.48□□□□□ -0.25
EXOSC1-203ENST00000370886 TSKSQ9UJT2 592 aa13.48□□□□□ -0.25
EXOSC1-203ENST00000370886 IBTKQ9P2D0 1353 aaPredicted RBP13.47□□□□□ -0.25
EXOSC1-203ENST00000370886 H7C1W4 665 aa13.47□□□□□ -0.25
EXOSC1-203ENST00000370886 GRM8O00222 908 aa13.47□□□□□ -0.25
EXOSC1-203ENST00000370886 HSP90B1P14625 803 aaKnown RBP13.47□□□□□ -0.25
EXOSC1-203ENST00000370886 LARGE2Q8N3Y3 721 aa13.47□□□□□ -0.25
EXOSC1-203ENST00000370886 TMEM57Q8N5G2 664 aa13.47□□□□□ -0.25
EXOSC1-203ENST00000370886 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.47□□□□□ -0.25
EXOSC1-203ENST00000370886 TRAF5O00463 557 aa13.46□□□□□ -0.25
EXOSC1-203ENST00000370886 NBPF7P0C2Y1 421 aaPredicted RBP13.46□□□□□ -0.25
EXOSC1-203ENST00000370886 EPS15P42566 896 aa13.46□□□□□ -0.25
EXOSC1-203ENST00000370886 CST9Q5W186 159 aa13.46□□□□□ -0.25
EXOSC1-203ENST00000370886 ITPRIPQ8IWB1 547 aa13.46□□□□□ -0.25
EXOSC1-203ENST00000370886 RBM17Q96I25 401 aaKnown RBP13.46□□□□□ -0.25
EXOSC1-203ENST00000370886 HHIPL1Q96JK4 782 aa13.46□□□□□ -0.25
EXOSC1-203ENST00000370886 CHMP3Q9Y3E7 222 aa13.46□□□□□ -0.25
EXOSC1-203ENST00000370886 COL4A5P29400 1685 aa13.45□□□□□ -0.26
EXOSC1-203ENST00000370886 PDE8AO60658 829 aa13.45□□□□□ -0.26
EXOSC1-203ENST00000370886 AOC2O75106 756 aa13.45□□□□□ -0.26
EXOSC1-203ENST00000370886 FMR1Q06787 632 aaKnown RBP eCLIP13.45□□□□□ -0.26
EXOSC1-203ENST00000370886 DGKZQ13574 1117 aa13.45□□□□□ -0.26
EXOSC1-203ENST00000370886 CRY2Q49AN0 593 aa13.45□□□□□ -0.26
EXOSC1-203ENST00000370886 SAPCD2Q86UD0 394 aa13.45□□□□□ -0.26
EXOSC1-203ENST00000370886 NIM1KQ8IY84 436 aa13.45□□□□□ -0.26
EXOSC1-203ENST00000370886 ADARB2Q9NS39 739 aaKnown RBP13.45□□□□□ -0.26
EXOSC1-203ENST00000370886 ABCC4O15439 1325 aa13.44□□□□□ -0.26
EXOSC1-203ENST00000370886 CELF2O95319 508 aaKnown RBP13.44□□□□□ -0.26
EXOSC1-203ENST00000370886 UBTFL1P0CB47 393 aaPredicted RBP13.44□□□□□ -0.26
EXOSC1-203ENST00000370886 MS4A1P11836 297 aa13.44□□□□□ -0.26
EXOSC1-203ENST00000370886 RLBP1P12271 317 aa13.44□□□□□ -0.26
EXOSC1-203ENST00000370886 INTS3Q68E01 1043 aaKnown RBP13.44□□□□□ -0.26
EXOSC1-203ENST00000370886 DDX46Q7L014 1031 aaKnown RBP13.44□□□□□ -0.26
EXOSC1-203ENST00000370886 USP44Q9H0E7 712 aa13.44□□□□□ -0.26
EXOSC1-203ENST00000370886 CDHR2Q9BYE9 1310 aa13.43□□□□□ -0.26
EXOSC1-203ENST00000370886 CASP7P55210 303 aa13.43□□□□□ -0.26
EXOSC1-203ENST00000370886 CTSWP56202 376 aa13.43□□□□□ -0.26
EXOSC1-203ENST00000370886 RIC1Q4ADV7 1423 aa13.43□□□□□ -0.26
EXOSC1-203ENST00000370886 CCDC152Q4G0S7 254 aa13.43□□□□□ -0.26
EXOSC1-203ENST00000370886 C20orf194Q5TEA3 1177 aa13.43□□□□□ -0.26
EXOSC1-203ENST00000370886 SUCLG2Q96I99 432 aa13.43□□□□□ -0.26
EXOSC1-203ENST00000370886 MEIS3Q99687 375 aa13.43□□□□□ -0.26
EXOSC1-203ENST00000370886 TMX4Q9H1E5 349 aaPredicted RBP13.43□□□□□ -0.26
EXOSC1-203ENST00000370886 COG6Q9Y2V7 657 aa13.43□□□□□ -0.26
EXOSC1-203ENST00000370886 NUP98P52948 1817 aa13.43□□□□□ -0.26
EXOSC1-203ENST00000370886 TNRC18O15417 2968 aaPredicted RBP13.42□□□□□ -0.26
EXOSC1-203ENST00000370886 PPIP5K2O43314 1243 aa13.42□□□□□ -0.26
EXOSC1-203ENST00000370886 NOGQ13253 232 aa13.42□□□□□ -0.26
EXOSC1-203ENST00000370886 SF3B3Q15393 1217 aaKnown RBP13.42□□□□□ -0.26
EXOSC1-203ENST00000370886 EPHA10Q5JZY3 1008 aa13.42□□□□□ -0.26
EXOSC1-203ENST00000370886 LMBR1LQ6UX01 489 aa13.42□□□□□ -0.26
EXOSC1-203ENST00000370886 SEC31BQ9NQW1 1179 aa13.42□□□□□ -0.26
EXOSC1-203ENST00000370886 GPRC5DQ9NZD1 345 aa13.42□□□□□ -0.26
EXOSC1-203ENST00000370886 RRP1P56182 461 aaKnown RBP13.41□□□□□ -0.26
EXOSC1-203ENST00000370886 TTLL11Q8NHH1 800 aa13.41□□□□□ -0.26
EXOSC1-203ENST00000370886 VPS33BQ9H267 617 aa13.41□□□□□ -0.26
EXOSC1-203ENST00000370886 GREM2Q9H772 168 aa13.41□□□□□ -0.26
EXOSC1-203ENST00000370886 SUPT16HQ9Y5B9 1047 aaKnown RBP13.41□□□□□ -0.26
EXOSC1-203ENST00000370886 PPEF1O14829 653 aaPredicted RBP13.4□□□□□ -0.26
EXOSC1-203ENST00000370886 GNAI3P08754 354 aa13.4□□□□□ -0.26
EXOSC1-203ENST00000370886 HOXA10P31260 410 aaPredicted RBP13.4□□□□□ -0.26
EXOSC1-203ENST00000370886 FOXO4P98177 505 aa13.4□□□□□ -0.26
EXOSC1-203ENST00000370886 TAF7LQ5H9L4 462 aa13.4□□□□□ -0.26
EXOSC1-203ENST00000370886 CIAPIN1Q6FI81 312 aa13.4□□□□□ -0.26
EXOSC1-203ENST00000370886 ZC3H15Q8WU90 426 aaKnown RBP13.4□□□□□ -0.26
EXOSC1-203ENST00000370886 CELF1Q92879 486 aaKnown RBP13.4□□□□□ -0.26
EXOSC1-203ENST00000370886 CRAMP1Q96RY5 1269 aa13.4□□□□□ -0.26
EXOSC1-203ENST00000370886 BICC1Q9H694 974 aaKnown RBP13.4□□□□□ -0.26
EXOSC1-203ENST00000370886 C1orf115Q9H7X2 142 aa13.4□□□□□ -0.26
EXOSC1-203ENST00000370886 LRRFIP2Q9Y608 721 aaKnown RBP13.4□□□□□ -0.26
EXOSC1-203ENST00000370886 IFIT5Q13325 482 aaKnown RBP13.39□□□□□ -0.27
EXOSC1-203ENST00000370886 GRAPQ13588 217 aa13.39□□□□□ -0.27
EXOSC1-203ENST00000370886 SLC51AQ86UW1 340 aa13.39□□□□□ -0.27
EXOSC1-203ENST00000370886 SUPT20HQ8NEM7 779 aa13.39□□□□□ -0.27
EXOSC1-203ENST00000370886 GRAPLQ8TC17 118 aaPredicted RBP13.39□□□□□ -0.27
EXOSC1-203ENST00000370886 PLA2G12BQ9BX93 195 aa13.39□□□□□ -0.27
EXOSC1-203ENST00000370886 GLIS2Q9BZE0 524 aaPredicted RBP13.39□□□□□ -0.27
EXOSC1-203ENST00000370886 ZNF408Q9H9D4 720 aa13.39□□□□□ -0.27
EXOSC1-203ENST00000370886 HDAC5Q9UQL6 1122 aa13.39□□□□□ -0.27
EXOSC1-203ENST00000370886 UTYO14607 1347 aa13.39□□□□□ -0.27
EXOSC1-203ENST00000370886 ANKRD18BA2A2Z9 1011 aa13.38□□□□□ -0.27
EXOSC1-203ENST00000370886 BBOX1O75936 387 aa13.38□□□□□ -0.27
EXOSC1-203ENST00000370886 ITGA6P23229 1130 aa13.38□□□□□ -0.27
EXOSC1-203ENST00000370886 RPS8P62241 208 aaKnown RBP13.38□□□□□ -0.27
EXOSC1-203ENST00000370886 PDE3AQ14432 1141 aa13.38□□□□□ -0.27
EXOSC1-203ENST00000370886 MVPQ14764 893 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms