RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 HMGXB3Q12766 1538 aa14.45□□□□□ -0.1
GPC4-201ENST00000370828 MYL5Q02045 173 aa14.45□□□□□ -0.1
GPC4-201ENST00000370828 FAM160A1Q05DH4 1040 aa14.45□□□□□ -0.1
GPC4-201ENST00000370828 RRAGBQ5VZM2 374 aa14.45□□□□□ -0.1
GPC4-201ENST00000370828 RUFY3Q7L099 469 aa14.45□□□□□ -0.1
GPC4-201ENST00000370828 POTEDQ86YR6 584 aa14.45□□□□□ -0.1
GPC4-201ENST00000370828 IFT81Q8WYA0 676 aa14.45□□□□□ -0.1
GPC4-201ENST00000370828 MKRN1Q9UHC7 482 aaKnown RBP14.45□□□□□ -0.1
GPC4-201ENST00000370828 GOLGA6CA6NDK9 693 aa14.45□□□□□ -0.1
GPC4-201ENST00000370828 GOLGA6DP0CG33 693 aa14.45□□□□□ -0.1
GPC4-201ENST00000370828 KANK3Q6NY19 840 aa14.45□□□□□ -0.1
GPC4-201ENST00000370828 KIAA1524Q8TCG1 905 aa14.45□□□□□ -0.1
GPC4-201ENST00000370828 GOLGA6AQ9NYA3 693 aa14.45□□□□□ -0.1
GPC4-201ENST00000370828 RAD50Q92878 1312 aa14.45□□□□□ -0.1
GPC4-201ENST00000370828 FANCCQ00597 558 aa14.45□□□□□ -0.1
GPC4-201ENST00000370828 NMIQ13287 307 aaPredicted RBP14.45□□□□□ -0.1
GPC4-201ENST00000370828 DDX46Q7L014 1031 aaKnown RBP14.45□□□□□ -0.1
GPC4-201ENST00000370828 CTAGE1Q96RT6 745 aa14.45□□□□□ -0.1
GPC4-201ENST00000370828 IFIT3O14879 490 aaKnown RBP14.45□□□□□ -0.1
GPC4-201ENST00000370828 B4GALNT4Q76KP1 1039 aa14.45□□□□□ -0.1
GPC4-201ENST00000370828 LEO1Q8WVC0 666 aaPredicted RBP14.45□□□□□ -0.1
GPC4-201ENST00000370828 PI4KAP2A4QPH2 592 aa14.44□□□□□ -0.1
GPC4-201ENST00000370828 KIF1CO43896 1103 aaKnown RBP14.44□□□□□ -0.1
GPC4-201ENST00000370828 PI4KAP1Q8N8J0 262 aa14.44□□□□□ -0.1
GPC4-201ENST00000370828 PIK3C2GO75747 1445 aa14.44□□□□□ -0.1
GPC4-201ENST00000370828 ANKRD36BQ8N2N9 1353 aa14.44□□□□□ -0.1
GPC4-201ENST00000370828 ANXA1P04083 346 aa14.44□□□□□ -0.1
GPC4-201ENST00000370828 SOGA3Q5TF21 947 aa14.44□□□□□ -0.1
GPC4-201ENST00000370828 TRIM47Q96LD4 638 aa14.44□□□□□ -0.1
GPC4-201ENST00000370828 GDAP1L1Q96MZ0 367 aa14.44□□□□□ -0.1
GPC4-201ENST00000370828 CARD14Q9BXL6 1004 aa14.44□□□□□ -0.1
GPC4-201ENST00000370828 SLC26A6Q9BXS9 759 aa14.44□□□□□ -0.1
GPC4-201ENST00000370828 LIG3P49916 1009 aa14.44□□□□□ -0.1
GPC4-201ENST00000370828 METAP2P50579 478 aaKnown RBP eCLIP14.44□□□□□ -0.1
GPC4-201ENST00000370828 HNRNPH2P55795 449 aaKnown RBP14.44□□□□□ -0.1
GPC4-201ENST00000370828 PTPDC1A2A3K4 754 aa14.44□□□□□ -0.1
GPC4-201ENST00000370828 ZBTB22O15209 634 aa14.44□□□□□ -0.1
GPC4-201ENST00000370828 ALG1Q9BT22 464 aa14.44□□□□□ -0.1
GPC4-201ENST00000370828 KRT86O43790 486 aa14.43□□□□□ -0.1
GPC4-201ENST00000370828 CCDC6Q16204 474 aa14.43□□□□□ -0.1
GPC4-201ENST00000370828 CFAP58Q5T655 872 aa14.43□□□□□ -0.1
GPC4-201ENST00000370828 CHST3Q7LGC8 479 aa14.43□□□□□ -0.1
GPC4-201ENST00000370828 SPATA24Q86W54 205 aa14.43□□□□□ -0.1
GPC4-201ENST00000370828 MPHOSPH8Q99549 860 aa14.43□□□□□ -0.1
GPC4-201ENST00000370828 SNRKQ9NRH2 765 aa14.43□□□□□ -0.1
GPC4-201ENST00000370828 RRP15Q9Y3B9 282 aaKnown RBP14.43□□□□□ -0.1
GPC4-201ENST00000370828 TACC1O75410 805 aa14.43□□□□□ -0.1
GPC4-201ENST00000370828 FBF1Q8TES7 1133 aa14.43□□□□□ -0.1
GPC4-201ENST00000370828 CNKSR2Q8WXI2 1034 aa14.43□□□□□ -0.1
GPC4-201ENST00000370828 SNX14Q9Y5W7 946 aa14.43□□□□□ -0.1
GPC4-201ENST00000370828 CCDC196A0A1B0GTZ2 297 aa14.43□□□□□ -0.1
GPC4-201ENST00000370828 GSPT1P15170 499 aaKnown RBP14.43□□□□□ -0.1
GPC4-201ENST00000370828 TERF2Q15554 542 aa14.43□□□□□ -0.1
GPC4-201ENST00000370828 GOLGA5Q8TBA6 731 aa14.43□□□□□ -0.1
GPC4-201ENST00000370828 MYD88Q99836 296 aa14.43□□□□□ -0.1
GPC4-201ENST00000370828 MRC2Q9UBG0 1479 aa14.43□□□□□ -0.1
GPC4-201ENST00000370828 AKR1B15C9JRZ8 316 aaPredicted RBP14.43□□□□□ -0.1
GPC4-201ENST00000370828 SEC31AO94979 1220 aaKnown RBP14.43□□□□□ -0.1
GPC4-201ENST00000370828 APOBRQ0VD83 1088 aa14.43□□□□□ -0.1
GPC4-201ENST00000370828 CDC37L1Q7L3B6 337 aa14.43□□□□□ -0.1
GPC4-201ENST00000370828 HPDP32754 393 aaPredicted RBP14.42□□□□□ -0.1
GPC4-201ENST00000370828 WAPLQ7Z5K2 1190 aa14.42□□□□□ -0.1
GPC4-201ENST00000370828 LRRC8AQ8IWT6 810 aa14.42□□□□□ -0.1
GPC4-201ENST00000370828 ANKS4BQ8N8V4 417 aa14.42□□□□□ -0.1
GPC4-201ENST00000370828 NAPBQ9H115 298 aa14.42□□□□□ -0.1
GPC4-201ENST00000370828 PHAXQ9H814 394 aaKnown RBP14.42□□□□□ -0.1
GPC4-201ENST00000370828 MINDY4BA8MYZ0 360 aa14.42□□□□□ -0.1
GPC4-201ENST00000370828 VAV2P52735 878 aa14.42□□□□□ -0.1
GPC4-201ENST00000370828 BLMP54132 1417 aaPredicted RBP14.42□□□□□ -0.1
GPC4-201ENST00000370828 KIF5AQ12840 1032 aa14.42□□□□□ -0.1
GPC4-201ENST00000370828 GPR161Q8N6U8 529 aaKnown RBP14.42□□□□□ -0.1
GPC4-201ENST00000370828 IMPACTQ9P2X3 320 aa14.42□□□□□ -0.1
GPC4-201ENST00000370828 USP19O94966 1318 aa14.42□□□□□ -0.1
GPC4-201ENST00000370828 E2F4Q16254 413 aa14.42□□□□□ -0.1
GPC4-201ENST00000370828 ARFGAP2Q8N6H7 521 aa14.42□□□□□ -0.1
GPC4-201ENST00000370828 XPO4Q9C0E2 1151 aaKnown RBP14.42□□□□□ -0.1
GPC4-201ENST00000370828 NSFL1CQ9UNZ2 370 aaKnown RBP14.42□□□□□ -0.1
GPC4-201ENST00000370828 IBTKQ9P2D0 1353 aaPredicted RBP14.42□□□□□ -0.1
GPC4-201ENST00000370828 GCKP35557 465 aa14.42□□□□□ -0.1
GPC4-201ENST00000370828 NAPGQ99747 312 aaPredicted RBP14.42□□□□□ -0.1
GPC4-201ENST00000370828 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.42□□□□□ -0.1
GPC4-201ENST00000370828 EVA1CP58658 441 aa14.41□□□□□ -0.1
GPC4-201ENST00000370828 SELENOSQ9BQE4 189 aa14.41□□□□□ -0.1
GPC4-201ENST00000370828 IKQ13123 557 aaPredicted RBP14.41□□□□□ -0.1
GPC4-201ENST00000370828 VPS36Q86VN1 386 aa14.41□□□□□ -0.1
GPC4-201ENST00000370828 NUDT16Q96DE0 195 aaKnown RBP14.41□□□□□ -0.1
GPC4-201ENST00000370828 CCDC172P0C7W6 258 aa14.41□□□□□ -0.1
GPC4-201ENST00000370828 CCDC129Q6ZRS4 1044 aa14.41□□□□□ -0.1
GPC4-201ENST00000370828 CEP83Q9Y592 693 aa14.41□□□□□ -0.1
GPC4-201ENST00000370828 CAPN7Q9Y6W3 813 aa14.41□□□□□ -0.1
GPC4-201ENST00000370828 PRAG1Q86YV5 1406 aa14.41□□□□□ -0.1
GPC4-201ENST00000370828 CCDC122Q5T0U0 273 aa14.41□□□□□ -0.1
GPC4-201ENST00000370828 DHX58Q96C10 678 aa14.41□□□□□ -0.1
GPC4-201ENST00000370828 ZMAT2Q96NC0 199 aaKnown RBP14.41□□□□□ -0.1
GPC4-201ENST00000370828 ARHGAP6O43182 974 aa14.4□□□□□ -0.1
GPC4-201ENST00000370828 KRT83P78385 493 aa14.4□□□□□ -0.1
GPC4-201ENST00000370828 SPAG1Q07617 926 aa14.4□□□□□ -0.1
GPC4-201ENST00000370828 TMEM67Q5HYA8 995 aa14.4□□□□□ -0.1
GPC4-201ENST00000370828 CCDC61Q9Y6R9 512 aa14.4□□□□□ -0.1
GPC4-201ENST00000370828 NSD2O96028 1365 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms