RNA–Protein interactions for RNA: ENST00000369937.4

CUEDC2-201, Transcript of CUE domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC2, Length 1,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2-201ENST00000369937 LINS1Q8NG48 757 aa26.01■■□□□ 1.75
CUEDC2-201ENST00000369937 TTLL11Q8NHH1 800 aa26.01■■□□□ 1.75
CUEDC2-201ENST00000369937 CNOT7Q9UIV1 285 aaKnown RBP26.01■■□□□ 1.75
CUEDC2-201ENST00000369937 H7C1W4 665 aa26■■□□□ 1.75
CUEDC2-201ENST00000369937 GCKRQ14397 625 aa26■■□□□ 1.75
CUEDC2-201ENST00000369937 GPR101Q96P66 508 aaPredicted RBP26■■□□□ 1.75
CUEDC2-201ENST00000369937 SPINK5Q9NQ38 1064 aaPredicted RBP26■■□□□ 1.75
CUEDC2-201ENST00000369937 COL4A1P02462 1669 aa25.99■■□□□ 1.75
CUEDC2-201ENST00000369937 XDHP47989 1333 aa25.99■■□□□ 1.75
CUEDC2-201ENST00000369937 ABT1Q9ULW3 272 aaKnown RBP25.99■■□□□ 1.75
CUEDC2-201ENST00000369937 CNTNAP1P78357 1384 aa25.98■■□□□ 1.75
CUEDC2-201ENST00000369937 PSMD14O00487 310 aa25.98■■□□□ 1.75
CUEDC2-201ENST00000369937 GREM2Q9H772 168 aa25.98■■□□□ 1.75
CUEDC2-201ENST00000369937 ZBTB12Q9Y330 459 aaPredicted RBP25.98■■□□□ 1.75
CUEDC2-201ENST00000369937 CACNA1FO60840 1977 aa25.97■■□□□ 1.75
CUEDC2-201ENST00000369937 ATP2B4P23634 1241 aa25.97■■□□□ 1.75
CUEDC2-201ENST00000369937 IGHMBP2P38935 993 aaKnown RBP25.97■■□□□ 1.75
CUEDC2-201ENST00000369937 MICALL2Q8IY33 904 aa25.97■■□□□ 1.75
CUEDC2-201ENST00000369937 DPF2Q92785 391 aa25.97■■□□□ 1.75
CUEDC2-201ENST00000369937 HSPA1AP0DMV8 641 aaKnown RBP25.96■■□□□ 1.75
CUEDC2-201ENST00000369937 HSPA1BP0DMV9 641 aaKnown RBP25.96■■□□□ 1.75
CUEDC2-201ENST00000369937 RPS12P25398 132 aaKnown RBP25.96■■□□□ 1.75
CUEDC2-201ENST00000369937 IFFO2Q5TF58 517 aa25.96■■□□□ 1.75
CUEDC2-201ENST00000369937 BSDC1Q9NW68 430 aaPredicted RBP25.96■■□□□ 1.75
CUEDC2-201ENST00000369937 DEFB115Q30KQ5 88 aa25.95■■□□□ 1.74
CUEDC2-201ENST00000369937 ZC3H15Q8WU90 426 aaKnown RBP25.95■■□□□ 1.74
CUEDC2-201ENST00000369937 RTL9Q8NET4 1388 aa25.95■■□□□ 1.74
CUEDC2-201ENST00000369937 PLA2G12BQ9BX93 195 aa25.94■■□□□ 1.74
CUEDC2-201ENST00000369937 MYH3P11055 1940 aa25.93■■□□□ 1.74
CUEDC2-201ENST00000369937 MPHOSPH8Q99549 860 aa25.93■■□□□ 1.74
CUEDC2-201ENST00000369937 KCNQ5Q9NR82 932 aa25.93■■□□□ 1.74
CUEDC2-201ENST00000369937 MINPP1Q9UNW1 487 aa25.93■■□□□ 1.74
CUEDC2-201ENST00000369937 F6X3S4 739 aa25.92■■□□□ 1.74
CUEDC2-201ENST00000369937 TRAF5O00463 557 aa25.92■■□□□ 1.74
CUEDC2-201ENST00000369937 ITGA6P23229 1130 aa25.92■■□□□ 1.74
CUEDC2-201ENST00000369937 VEGFBP49765 207 aa25.92■■□□□ 1.74
CUEDC2-201ENST00000369937 RASSF10A6NK89 507 aa25.91■■□□□ 1.74
CUEDC2-201ENST00000369937 PAXIP1Q6ZW49 1069 aaPredicted RBP25.91■■□□□ 1.74
CUEDC2-201ENST00000369937 TRPM4Q8TD43 1214 aa25.91■■□□□ 1.74
CUEDC2-201ENST00000369937 PGAP2Q9UHJ9 254 aa25.91■■□□□ 1.74
CUEDC2-201ENST00000369937 SHTN1A0MZ66 631 aa25.9■■□□□ 1.74
CUEDC2-201ENST00000369937 HIRAP54198 1017 aaPredicted RBP25.9■■□□□ 1.74
CUEDC2-201ENST00000369937 FMR1Q06787 632 aaKnown RBP eCLIP25.9■■□□□ 1.74
CUEDC2-201ENST00000369937 BEND3Q5T5X7 828 aa25.9■■□□□ 1.74
CUEDC2-201ENST00000369937 RBM26Q5T8P6 1007 aaKnown RBP25.9■■□□□ 1.74
CUEDC2-201ENST00000369937 CDC37L1Q7L3B6 337 aa25.9■■□□□ 1.74
CUEDC2-201ENST00000369937 ANKRD18BA2A2Z9 1011 aa25.89■■□□□ 1.74
CUEDC2-201ENST00000369937 VIL1P09327 827 aaKnown RBP25.89■■□□□ 1.74
CUEDC2-201ENST00000369937 CASP7P55210 303 aa25.89■■□□□ 1.74
CUEDC2-201ENST00000369937 FAM161AQ3B820 660 aa25.89■■□□□ 1.74
CUEDC2-201ENST00000369937 TBC1D10BQ4KMP7 808 aaPredicted RBP25.89■■□□□ 1.74
CUEDC2-201ENST00000369937 SLC4A10Q6U841 1118 aa25.89■■□□□ 1.74
CUEDC2-201ENST00000369937 SAMD7Q7Z3H4 446 aa25.89■■□□□ 1.74
CUEDC2-201ENST00000369937 PODNQ7Z5L7 613 aa25.89■■□□□ 1.74
CUEDC2-201ENST00000369937 GLIS2Q9BZE0 524 aaPredicted RBP25.89■■□□□ 1.74
CUEDC2-201ENST00000369937 ANKRD2Q9GZV1 360 aa25.89■■□□□ 1.74
CUEDC2-201ENST00000369937 CHMP3Q9Y3E7 222 aa25.89■■□□□ 1.74
CUEDC2-201ENST00000369937 ZNF521Q96K83 1311 aa25.88■■□□□ 1.73
CUEDC2-201ENST00000369937 CSF1RP07333 972 aa25.88■■□□□ 1.73
CUEDC2-201ENST00000369937 CCT4P50991 539 aaKnown RBP25.88■■□□□ 1.73
CUEDC2-201ENST00000369937 AIDAQ96BJ3 306 aa25.88■■□□□ 1.73
CUEDC2-201ENST00000369937 C9orf78Q9NZ63 289 aaPredicted RBP25.88■■□□□ 1.73
CUEDC2-201ENST00000369937 E9PSI1 815 aa25.87■■□□□ 1.73
CUEDC2-201ENST00000369937 CELF2O95319 508 aaKnown RBP25.87■■□□□ 1.73
CUEDC2-201ENST00000369937 ZNF408Q9H9D4 720 aa25.87■■□□□ 1.73
CUEDC2-201ENST00000369937 LEMD3Q9Y2U8 911 aa25.87■■□□□ 1.73
CUEDC2-201ENST00000369937 MED23Q9ULK4 1368 aa25.86■■□□□ 1.73
CUEDC2-201ENST00000369937 ECE1P42892 770 aa25.86■■□□□ 1.73
CUEDC2-201ENST00000369937 KCNJ4P48050 445 aa25.86■■□□□ 1.73
CUEDC2-201ENST00000369937 IFIT5Q13325 482 aaKnown RBP25.86■■□□□ 1.73
CUEDC2-201ENST00000369937 CST9Q5W186 159 aa25.86■■□□□ 1.73
CUEDC2-201ENST00000369937 AGBL3Q8NEM8 1001 aa25.86■■□□□ 1.73
CUEDC2-201ENST00000369937 DCPSQ96C86 337 aaKnown RBP25.86■■□□□ 1.73
CUEDC2-201ENST00000369937 SPEF2Q9C093 1822 aa25.86■■□□□ 1.73
CUEDC2-201ENST00000369937 WDR33Q9C0J8 1336 aaKnown RBP25.86■■□□□ 1.73
CUEDC2-201ENST00000369937 USP17L3A6NCW0 530 aa25.85■■□□□ 1.73
CUEDC2-201ENST00000369937 USP17L4A6NCW7 530 aa25.85■■□□□ 1.73
CUEDC2-201ENST00000369937 GRM1Q13255 1194 aa25.85■■□□□ 1.73
CUEDC2-201ENST00000369937 COL13A1Q5TAT6 717 aaPredicted RBP25.85■■□□□ 1.73
CUEDC2-201ENST00000369937 RSBN1LQ6PCB5 846 aaPredicted RBP25.85■■□□□ 1.73
CUEDC2-201ENST00000369937 USP17L1Q7RTZ2 530 aa25.85■■□□□ 1.73
CUEDC2-201ENST00000369937 SRCIN1Q9C0H9 1055 aa25.85■■□□□ 1.73
CUEDC2-201ENST00000369937 GRM8O00222 908 aa25.84■■□□□ 1.73
CUEDC2-201ENST00000369937 ALDH1L1O75891 902 aa25.84■■□□□ 1.73
CUEDC2-201ENST00000369937 KIF4BQ2VIQ3 1234 aa25.84■■□□□ 1.73
CUEDC2-201ENST00000369937 USP48Q86UV5 1035 aa25.84■■□□□ 1.73
CUEDC2-201ENST00000369937 TRPM7Q96QT4 1865 aa25.83■■□□□ 1.73
CUEDC2-201ENST00000369937 TAF7LQ5H9L4 462 aa25.83■■□□□ 1.73
CUEDC2-201ENST00000369937 FBXW7Q969H0 707 aa25.83■■□□□ 1.73
CUEDC2-201ENST00000369937 TLL2Q9Y6L7 1015 aa25.83■■□□□ 1.73
CUEDC2-201ENST00000369937 ZNF804BA4D1E1 1349 aa25.83■■□□□ 1.73
CUEDC2-201ENST00000369937 PCNTO95613 3336 aa25.83■■□□□ 1.72
CUEDC2-201ENST00000369937 WTIPA6NIX2 430 aaPredicted RBP25.82■■□□□ 1.72
CUEDC2-201ENST00000369937 FOXO4P98177 505 aa25.82■■□□□ 1.72
CUEDC2-201ENST00000369937 CCDC57Q2TAC2 916 aa25.82■■□□□ 1.72
CUEDC2-201ENST00000369937 KRT26Q7Z3Y9 468 aa25.82■■□□□ 1.72
CUEDC2-201ENST00000369937 COA1Q9GZY4 146 aa25.82■■□□□ 1.72
CUEDC2-201ENST00000369937 EGFRP00533 1210 aa25.81■■□□□ 1.72
CUEDC2-201ENST00000369937 USP17L8P0C7I0 530 aa25.81■■□□□ 1.72
CUEDC2-201ENST00000369937 MAP2K1Q02750 393 aaPredicted RBP25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms