RNA–Protein interactions for RNA: ENST00000369442.3

GDAP2-201, Transcript of ganglioside induced differentiation associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene GDAP2, Length 2,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDAP2-201ENST00000369442 NIP7Q9Y221 180 aaKnown RBP eCLIP16.61■□□□□ 0.25
GDAP2-201ENST00000369442 PDE8AO60658 829 aa16.6■□□□□ 0.25
GDAP2-201ENST00000369442 BAG4O95429 457 aaKnown RBP16.6■□□□□ 0.25
GDAP2-201ENST00000369442 TTC39AQ5SRH9 613 aa16.6■□□□□ 0.25
GDAP2-201ENST00000369442 BICDL1Q6ZP65 573 aa16.6■□□□□ 0.25
GDAP2-201ENST00000369442 RIPOR2Q9Y4F9 1068 aa16.6■□□□□ 0.25
GDAP2-201ENST00000369442 CYP2E1P05181 493 aaPredicted RBP16.6■□□□□ 0.25
GDAP2-201ENST00000369442 CUL4AQ13619 759 aa16.6■□□□□ 0.25
GDAP2-201ENST00000369442 MCTP1Q6DN14 999 aa16.6■□□□□ 0.25
GDAP2-201ENST00000369442 GBP4Q96PP9 640 aa16.6■□□□□ 0.25
GDAP2-201ENST00000369442 GPR108Q9NPR9 543 aa16.6■□□□□ 0.25
GDAP2-201ENST00000369442 PDRG1Q9NUG6 133 aa16.6■□□□□ 0.25
GDAP2-201ENST00000369442 EPB41L2O43491 1005 aaKnown RBP16.59■□□□□ 0.25
GDAP2-201ENST00000369442 MEX3CQ5U5Q3 659 aaKnown RBP16.59■□□□□ 0.25
GDAP2-201ENST00000369442 ZAP70P43403 619 aa16.59■□□□□ 0.25
GDAP2-201ENST00000369442 MCM2P49736 904 aa16.59■□□□□ 0.25
GDAP2-201ENST00000369442 DDX11L8A8MPP1 907 aa16.58■□□□□ 0.25
GDAP2-201ENST00000369442 HSPA1LP34931 641 aa16.58■□□□□ 0.25
GDAP2-201ENST00000369442 ATP2B3Q16720 1220 aa16.58■□□□□ 0.25
GDAP2-201ENST00000369442 FNBP4Q8N3X1 1017 aaPredicted RBP16.58■□□□□ 0.25
GDAP2-201ENST00000369442 ZKSCAN1P17029 563 aaPredicted RBP16.58■□□□□ 0.24
GDAP2-201ENST00000369442 MCMDC2Q4G0Z9 681 aa16.58■□□□□ 0.24
GDAP2-201ENST00000369442 AMIGO3Q86WK7 504 aa16.58■□□□□ 0.24
GDAP2-201ENST00000369442 UTP14AQ9BVJ6 771 aaKnown RBP16.58■□□□□ 0.24
GDAP2-201ENST00000369442 CWC22Q9HCG8 908 aaKnown RBP16.58■□□□□ 0.24
GDAP2-201ENST00000369442 SH3TC1Q8TE82 1336 aa16.57■□□□□ 0.24
GDAP2-201ENST00000369442 M0R2C6 588 aa16.57■□□□□ 0.24
GDAP2-201ENST00000369442 CCDC83Q8IWF9 413 aa16.57■□□□□ 0.24
GDAP2-201ENST00000369442 CCDC24Q8N4L8 307 aa16.57■□□□□ 0.24
GDAP2-201ENST00000369442 NECAB1Q8N987 351 aa16.57■□□□□ 0.24
GDAP2-201ENST00000369442 ZSWIM6Q9HCJ5 1215 aa16.57■□□□□ 0.24
GDAP2-201ENST00000369442 NUCB2P80303 420 aa16.57■□□□□ 0.24
GDAP2-201ENST00000369442 CCDC158Q5M9N0 1113 aa16.57■□□□□ 0.24
GDAP2-201ENST00000369442 KCNB2Q92953 911 aa16.57■□□□□ 0.24
GDAP2-201ENST00000369442 CYP46A1Q9Y6A2 500 aa16.57■□□□□ 0.24
GDAP2-201ENST00000369442 MYH3P11055 1940 aa16.57■□□□□ 0.24
GDAP2-201ENST00000369442 C3orf67Q6ZVT6 689 aa16.56■□□□□ 0.24
GDAP2-201ENST00000369442 SMARCC1Q92922 1105 aaPredicted RBP16.56■□□□□ 0.24
GDAP2-201ENST00000369442 SRP68Q9UHB9 627 aaKnown RBP16.56■□□□□ 0.24
GDAP2-201ENST00000369442 COL4A1P02462 1669 aa16.56■□□□□ 0.24
GDAP2-201ENST00000369442 NTSR2O95665 410 aa16.56■□□□□ 0.24
GDAP2-201ENST00000369442 MCAMP43121 646 aa16.56■□□□□ 0.24
GDAP2-201ENST00000369442 ST3GAL1Q11201 340 aa16.56■□□□□ 0.24
GDAP2-201ENST00000369442 VGLL2Q8N8G2 317 aa16.56■□□□□ 0.24
GDAP2-201ENST00000369442 LRRC2Q9BYS8 371 aa16.56■□□□□ 0.24
GDAP2-201ENST00000369442 LIMCH1Q9UPQ0 1083 aa16.56■□□□□ 0.24
GDAP2-201ENST00000369442 AKAP2Q9Y2D5 859 aa16.56■□□□□ 0.24
GDAP2-201ENST00000369442 OSBP2Q969R2 916 aa16.55■□□□□ 0.24
GDAP2-201ENST00000369442 MAST3O60307 1309 aa16.55■□□□□ 0.24
GDAP2-201ENST00000369442 PHKA1P46020 1223 aa16.55■□□□□ 0.24
GDAP2-201ENST00000369442 TPCN1Q9ULQ1 816 aa16.55■□□□□ 0.24
GDAP2-201ENST00000369442 RPAP1Q9BWH6 1393 aaPredicted RBP16.54■□□□□ 0.24
GDAP2-201ENST00000369442 CYP21A2P08686 494 aa16.54■□□□□ 0.24
GDAP2-201ENST00000369442 ME3Q16798 604 aa16.54■□□□□ 0.24
GDAP2-201ENST00000369442 WTIPA6NIX2 430 aaPredicted RBP16.54■□□□□ 0.24
GDAP2-201ENST00000369442 STK3Q13188 491 aa16.54■□□□□ 0.24
GDAP2-201ENST00000369442 ERFEQ4G0M1 354 aa16.54■□□□□ 0.24
GDAP2-201ENST00000369442 ZMYM1Q5SVZ6 1142 aa16.54■□□□□ 0.24
GDAP2-201ENST00000369442 AFF2P51816 1311 aa16.53■□□□□ 0.24
GDAP2-201ENST00000369442 RNF113AO15541 343 aaKnown RBP16.53■□□□□ 0.24
GDAP2-201ENST00000369442 WASHC4Q2M389 1173 aa16.53■□□□□ 0.24
GDAP2-201ENST00000369442 TTLL5Q6EMB2 1281 aa16.53■□□□□ 0.24
GDAP2-201ENST00000369442 BLOC1S2Q6QNY1 142 aa16.53■□□□□ 0.24
GDAP2-201ENST00000369442 STOX1Q6ZVD7 989 aa16.53■□□□□ 0.24
GDAP2-201ENST00000369442 PDE8BO95263 885 aa16.53■□□□□ 0.24
GDAP2-201ENST00000369442 TPRNQ4KMQ1 711 aa16.53■□□□□ 0.24
GDAP2-201ENST00000369442 USPL1Q5W0Q7 1092 aa16.53■□□□□ 0.24
GDAP2-201ENST00000369442 TBC1D9BQ66K14 1250 aa16.53■□□□□ 0.24
GDAP2-201ENST00000369442 CERKQ8TCT0 537 aa16.53■□□□□ 0.24
GDAP2-201ENST00000369442 RREB1Q92766 1687 aa16.52■□□□□ 0.24
GDAP2-201ENST00000369442 COL5A3P25940 1745 aaPredicted RBP16.52■□□□□ 0.24
GDAP2-201ENST00000369442 GNPATO15228 680 aa16.52■□□□□ 0.24
GDAP2-201ENST00000369442 RNF20Q5VTR2 975 aa16.52■□□□□ 0.24
GDAP2-201ENST00000369442 INTS4Q96HW7 963 aaKnown RBP16.52■□□□□ 0.24
GDAP2-201ENST00000369442 FBXO3Q9UK99 471 aa16.52■□□□□ 0.24
GDAP2-201ENST00000369442 SPEF2Q9C093 1822 aa16.52■□□□□ 0.23
GDAP2-201ENST00000369442 PHF14O94880 888 aa16.51■□□□□ 0.23
GDAP2-201ENST00000369442 BRD1O95696 1058 aa16.51■□□□□ 0.23
GDAP2-201ENST00000369442 RPS6KB1P23443 525 aa16.51■□□□□ 0.23
GDAP2-201ENST00000369442 MPHOSPH8Q99549 860 aa16.51■□□□□ 0.23
GDAP2-201ENST00000369442 TM6SF1Q9BZW5 370 aa16.51■□□□□ 0.23
GDAP2-201ENST00000369442 PUS7LQ9H0K6 701 aaKnown RBP16.51■□□□□ 0.23
GDAP2-201ENST00000369442 GDPD2Q9HCC8 539 aa16.51■□□□□ 0.23
GDAP2-201ENST00000369442 PRPF40AO75400 957 aaKnown RBP16.51■□□□□ 0.23
GDAP2-201ENST00000369442 HSPD1P10809 573 aaKnown RBP16.51■□□□□ 0.23
GDAP2-201ENST00000369442 NCLP19338 710 aaKnown RBP16.51■□□□□ 0.23
GDAP2-201ENST00000369442 TOB2Q14106 344 aaPredicted RBP16.51■□□□□ 0.23
GDAP2-201ENST00000369442 CCDC102BQ68D86 513 aa16.51■□□□□ 0.23
GDAP2-201ENST00000369442 GJD4Q96KN9 370 aaPredicted RBP16.51■□□□□ 0.23
GDAP2-201ENST00000369442 BCL2L12Q9HB09 334 aa16.51■□□□□ 0.23
GDAP2-201ENST00000369442 PIH1D3Q9NQM4 214 aaKnown RBP16.51■□□□□ 0.23
GDAP2-201ENST00000369442 CCNL1Q9UK58 526 aaPredicted RBP16.51■□□□□ 0.23
GDAP2-201ENST00000369442 DDX60Q8IY21 1712 aaKnown RBP16.51■□□□□ 0.23
GDAP2-201ENST00000369442 RFX7Q2KHR2 1363 aa16.51■□□□□ 0.23
GDAP2-201ENST00000369442 CHST3Q7LGC8 479 aa16.5■□□□□ 0.23
GDAP2-201ENST00000369442 BRPF3Q9ULD4 1205 aa16.5■□□□□ 0.23
GDAP2-201ENST00000369442 BTAF1O14981 1849 aa16.5■□□□□ 0.23
GDAP2-201ENST00000369442 SPATA31A6Q5VVP1 1343 aa16.5■□□□□ 0.23
GDAP2-201ENST00000369442 TAF1P21675 1872 aa16.5■□□□□ 0.23
GDAP2-201ENST00000369442 HAND2P61296 217 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms