RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 METTL24Q5JXM2 366 aa29.2■■■□□ 2.27
SNX3-203ENST00000368979 CDC5LQ99459 802 aaKnown RBP29.2■■■□□ 2.27
SNX3-203ENST00000368979 AKAP2Q9Y2D5 859 aa29.2■■■□□ 2.27
SNX3-203ENST00000368979 MROH5Q6ZUA9 1318 aa29.2■■■□□ 2.26
SNX3-203ENST00000368979 NPHP1O15259 732 aa29.2■■■□□ 2.26
SNX3-203ENST00000368979 IGHMBP2P38935 993 aaKnown RBP29.2■■■□□ 2.26
SNX3-203ENST00000368979 A0A1B0GUL7 405 aa29.19■■■□□ 2.26
SNX3-203ENST00000368979 MPHOSPH8Q99549 860 aa29.19■■■□□ 2.26
SNX3-203ENST00000368979 CCDC125Q86Z20 511 aa29.18■■■□□ 2.26
SNX3-203ENST00000368979 TRIM6-TRIM34B2RNG4 842 aa29.17■■■□□ 2.26
SNX3-203ENST00000368979 TIMM10P62072 90 aa29.17■■■□□ 2.26
SNX3-203ENST00000368979 A0A1B0GUL6 1792 aa29.17■■■□□ 2.26
SNX3-203ENST00000368979 ARAP2Q8WZ64 1704 aa29.17■■■□□ 2.26
SNX3-203ENST00000368979 AK9Q5TCS8 1911 aa29.17■■■□□ 2.26
SNX3-203ENST00000368979 ATP5JP18859 108 aa29.16■■■□□ 2.26
SNX3-203ENST00000368979 ST5P78524 1137 aa29.16■■■□□ 2.26
SNX3-203ENST00000368979 NEUROD6Q96NK8 337 aa29.16■■■□□ 2.26
SNX3-203ENST00000368979 PDE8BO95263 885 aa29.15■■■□□ 2.26
SNX3-203ENST00000368979 ANKRD18AQ8IVF6 992 aa29.15■■■□□ 2.26
SNX3-203ENST00000368979 RILPL2Q969X0 211 aa29.15■■■□□ 2.26
SNX3-203ENST00000368979 TAF1P21675 1872 aa29.15■■■□□ 2.26
SNX3-203ENST00000368979 CNTROBQ8N137 903 aa29.15■■■□□ 2.26
SNX3-203ENST00000368979 MAP4K4O95819 1239 aaPredicted RBP29.14■■■□□ 2.25
SNX3-203ENST00000368979 ATP2B3Q16720 1220 aa29.14■■■□□ 2.25
SNX3-203ENST00000368979 CELF1Q92879 486 aaKnown RBP29.13■■■□□ 2.25
SNX3-203ENST00000368979 BSDC1Q9NW68 430 aaPredicted RBP29.13■■■□□ 2.25
SNX3-203ENST00000368979 CASC1Q6TDU7 716 aa29.12■■■□□ 2.25
SNX3-203ENST00000368979 FGFR2P21802 821 aa29.11■■■□□ 2.25
SNX3-203ENST00000368979 MFAP1P55081 439 aaKnown RBP29.11■■■□□ 2.25
SNX3-203ENST00000368979 XAGE2Q96GT9 111 aa29.11■■■□□ 2.25
SNX3-203ENST00000368979 BOLA2Q9H3K6 86 aa29.11■■■□□ 2.25
SNX3-203ENST00000368979 PUM3Q15397 648 aaKnown RBP29.1■■■□□ 2.25
SNX3-203ENST00000368979 CRY2Q49AN0 593 aa29.1■■■□□ 2.25
SNX3-203ENST00000368979 DDX46Q7L014 1031 aaKnown RBP29.1■■■□□ 2.25
SNX3-203ENST00000368979 UPF2Q9HAU5 1272 aaKnown RBP29.1■■■□□ 2.25
SNX3-203ENST00000368979 ANKRD31Q8N7Z5 1873 aa29.1■■■□□ 2.25
SNX3-203ENST00000368979 ADORA1P30542 326 aa29.1■■■□□ 2.25
SNX3-203ENST00000368979 CHRNDQ07001 517 aa29.1■■■□□ 2.25
SNX3-203ENST00000368979 EVI5LQ96CN4 794 aa29.1■■■□□ 2.25
SNX3-203ENST00000368979 MMP10P09238 476 aa29.09■■■□□ 2.25
SNX3-203ENST00000368979 CHMLP26374 656 aa29.09■■■□□ 2.25
SNX3-203ENST00000368979 RPS8P62241 208 aaKnown RBP29.09■■■□□ 2.25
SNX3-203ENST00000368979 HELBQ8NG08 1087 aaPredicted RBP29.09■■■□□ 2.25
SNX3-203ENST00000368979 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.09■■■□□ 2.25
SNX3-203ENST00000368979 EIF5BO60841 1220 aaKnown RBP29.08■■■□□ 2.25
SNX3-203ENST00000368979 LPIN2Q92539 896 aa29.08■■■□□ 2.25
SNX3-203ENST00000368979 HAUS7Q99871 368 aa29.08■■■□□ 2.25
SNX3-203ENST00000368979 KLRG2A4D1S0 409 aaPredicted RBP29.07■■■□□ 2.24
SNX3-203ENST00000368979 MSL1Q68DK7 614 aa29.07■■■□□ 2.24
SNX3-203ENST00000368979 PARP3Q9Y6F1 533 aa29.07■■■□□ 2.24
SNX3-203ENST00000368979 TAF5LO75529 589 aa29.05■■■□□ 2.24
SNX3-203ENST00000368979 GRAPQ13588 217 aa29.05■■■□□ 2.24
SNX3-203ENST00000368979 CCDC158Q5M9N0 1113 aa29.05■■■□□ 2.24
SNX3-203ENST00000368979 GRAPLQ8TC17 118 aaPredicted RBP29.05■■■□□ 2.24
SNX3-203ENST00000368979 TBC1D32Q96NH3 1257 aa29.05■■■□□ 2.24
SNX3-203ENST00000368979 MINPP1Q9UNW1 487 aa29.04■■■□□ 2.24
SNX3-203ENST00000368979 SLC5A1P13866 664 aa29.04■■■□□ 2.24
SNX3-203ENST00000368979 GORABQ5T7V8 394 aa29.04■■■□□ 2.24
SNX3-203ENST00000368979 BRIP1Q9BX63 1249 aa29.04■■■□□ 2.24
SNX3-203ENST00000368979 TTC39AQ5SRH9 613 aa29.03■■■□□ 2.24
SNX3-203ENST00000368979 RPGRQ92834 1020 aaKnown RBP29.03■■■□□ 2.24
SNX3-203ENST00000368979 ESYT1Q9BSJ8 1104 aa29.03■■■□□ 2.24
SNX3-203ENST00000368979 IFIT1P09914 478 aaKnown RBP29.02■■■□□ 2.24
SNX3-203ENST00000368979 ZNF512BQ96KM6 892 aaPredicted RBP29.02■■■□□ 2.24
SNX3-203ENST00000368979 HOXA10P31260 410 aaPredicted RBP29.01■■■□□ 2.23
SNX3-203ENST00000368979 DNAJC2Q99543 621 aaKnown RBP29.01■■■□□ 2.23
SNX3-203ENST00000368979 RFX7Q2KHR2 1363 aa29.01■■■□□ 2.23
SNX3-203ENST00000368979 EDC3Q96F86 508 aaKnown RBP29■■■□□ 2.23
SNX3-203ENST00000368979 RBM17Q96I25 401 aaKnown RBP29■■■□□ 2.23
SNX3-203ENST00000368979 C22orf23Q9BZE7 217 aa29■■■□□ 2.23
SNX3-203ENST00000368979 SNAP23O00161 211 aa28.99■■■□□ 2.23
SNX3-203ENST00000368979 COL11A2P13942 1736 aaPredicted RBP28.99■■■□□ 2.23
SNX3-203ENST00000368979 ANP32AP39687 249 aaKnown RBP28.99■■■□□ 2.23
SNX3-203ENST00000368979 NDUFB9Q9Y6M9 179 aa28.99■■■□□ 2.23
SNX3-203ENST00000368979 UBE4AQ14139 1066 aa28.99■■■□□ 2.23
SNX3-203ENST00000368979 FSD1Q9BTV5 496 aa28.99■■■□□ 2.23
SNX3-203ENST00000368979 CCDC102BQ68D86 513 aa28.98■■■□□ 2.23
SNX3-203ENST00000368979 CRAMP1Q96RY5 1269 aa28.98■■■□□ 2.23
SNX3-203ENST00000368979 PDGFDQ9GZP0 370 aaPredicted RBP28.98■■■□□ 2.23
SNX3-203ENST00000368979 ANKRD2Q9GZV1 360 aa28.98■■■□□ 2.23
SNX3-203ENST00000368979 PAG1Q9NWQ8 432 aa28.98■■■□□ 2.23
SNX3-203ENST00000368979 HIP1O00291 1037 aa28.97■■■□□ 2.23
SNX3-203ENST00000368979 REC8O95072 547 aa28.97■■■□□ 2.23
SNX3-203ENST00000368979 ARID4AP29374 1257 aaPredicted RBP28.97■■■□□ 2.23
SNX3-203ENST00000368979 AKAP11Q9UKA4 1901 aa28.97■■■□□ 2.23
SNX3-203ENST00000368979 LRRC37AA6NMS7 1700 aa28.96■■■□□ 2.23
SNX3-203ENST00000368979 PHKA1P46020 1223 aa28.96■■■□□ 2.23
SNX3-203ENST00000368979 RBM25P49756 843 aaKnown RBP28.96■■■□□ 2.23
SNX3-203ENST00000368979 SCARF1Q14162 830 aa28.96■■■□□ 2.23
SNX3-203ENST00000368979 DIAPH3Q9NSV4 1193 aa28.96■■■□□ 2.23
SNX3-203ENST00000368979 UQCRFS1P1P0C7P4 283 aa28.95■■■□□ 2.23
SNX3-203ENST00000368979 PDE6BP35913 854 aa28.95■■■□□ 2.23
SNX3-203ENST00000368979 KBTBD3Q8NAB2 608 aa28.95■■■□□ 2.23
SNX3-203ENST00000368979 SLC16A10Q8TF71 515 aa28.95■■■□□ 2.23
SNX3-203ENST00000368979 IL25Q9H293 177 aa28.95■■■□□ 2.23
SNX3-203ENST00000368979 GOLIM4O00461 696 aa28.94■■■□□ 2.22
SNX3-203ENST00000368979 SGSM2O43147 1006 aa28.94■■■□□ 2.22
SNX3-203ENST00000368979 MCAMP43121 646 aa28.94■■■□□ 2.22
SNX3-203ENST00000368979 SRGNP10124 158 aa28.94■■■□□ 2.22
SNX3-203ENST00000368979 TICAM2Q86XR7 235 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms