RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 GOLGA6L19H0YKK7 550 aa10.48□□□□□ -0.73
THBS3-201ENST00000368378 TOM1O60784 492 aa10.48□□□□□ -0.73
THBS3-201ENST00000368378 HS1BP3Q53T59 392 aa10.48□□□□□ -0.73
THBS3-201ENST00000368378 AKAP4Q5JQC9 854 aa10.48□□□□□ -0.73
THBS3-201ENST00000368378 TTLL5Q6EMB2 1281 aa10.48□□□□□ -0.73
THBS3-201ENST00000368378 KRT28Q7Z3Y7 464 aa10.48□□□□□ -0.73
THBS3-201ENST00000368378 TICAM2Q86XR7 235 aa10.48□□□□□ -0.73
THBS3-201ENST00000368378 EVI5LQ96CN4 794 aa10.48□□□□□ -0.73
THBS3-201ENST00000368378 CBX8Q9HC52 389 aa10.48□□□□□ -0.73
THBS3-201ENST00000368378 RNMTO43148 476 aaKnown RBP10.47□□□□□ -0.73
THBS3-201ENST00000368378 WASHC4Q2M389 1173 aa10.47□□□□□ -0.73
THBS3-201ENST00000368378 KSR2Q6VAB6 950 aa10.47□□□□□ -0.73
THBS3-201ENST00000368378 CCDC82Q8N4S0 544 aa10.47□□□□□ -0.73
THBS3-201ENST00000368378 BABAM1Q9NWV8 329 aa10.47□□□□□ -0.73
THBS3-201ENST00000368378 CEMIPQ8WUJ3 1361 aa10.47□□□□□ -0.73
THBS3-201ENST00000368378 GIGYF1O75420 1035 aaPredicted RBP10.47□□□□□ -0.73
THBS3-201ENST00000368378 CHRM1P11229 460 aaPredicted RBP10.47□□□□□ -0.73
THBS3-201ENST00000368378 ATP2B1P20020 1258 aa10.47□□□□□ -0.73
THBS3-201ENST00000368378 ATP2B3Q16720 1220 aa10.47□□□□□ -0.73
THBS3-201ENST00000368378 CLIP2Q9UDT6 1046 aa10.47□□□□□ -0.73
THBS3-201ENST00000368378 DYNC1I1O14576 645 aa10.47□□□□□ -0.73
THBS3-201ENST00000368378 GCP02774 474 aa10.47□□□□□ -0.73
THBS3-201ENST00000368378 SF3A1Q15459 793 aaKnown RBP10.47□□□□□ -0.73
THBS3-201ENST00000368378 RNF20Q5VTR2 975 aa10.47□□□□□ -0.73
THBS3-201ENST00000368378 BRINP3Q76B58 766 aa10.47□□□□□ -0.73
THBS3-201ENST00000368378 TTC5Q8N0Z6 440 aa10.47□□□□□ -0.73
THBS3-201ENST00000368378 ZNF710Q8N1W2 664 aa10.47□□□□□ -0.73
THBS3-201ENST00000368378 TTC41PQ6P2S7 1318 aa10.46□□□□□ -0.73
THBS3-201ENST00000368378 ANKARQ7Z5J8 1434 aa10.46□□□□□ -0.73
THBS3-201ENST00000368378 FAM43BQ6ZT52 329 aaPredicted RBP10.46□□□□□ -0.73
THBS3-201ENST00000368378 PDCL2Q8N4E4 241 aa10.46□□□□□ -0.73
THBS3-201ENST00000368378 RAPGEF4Q8WZA2 1011 aa10.46□□□□□ -0.73
THBS3-201ENST00000368378 KAZALD1Q96I82 304 aa10.46□□□□□ -0.73
THBS3-201ENST00000368378 SDF4Q9BRK5 362 aa10.46□□□□□ -0.73
THBS3-201ENST00000368378 MRVI1Q9Y6F6 885 aa10.46□□□□□ -0.73
THBS3-201ENST00000368378 PXDNLA1KZ92 1463 aa10.46□□□□□ -0.73
THBS3-201ENST00000368378 RGPD2P0DJD1 1756 aa10.46□□□□□ -0.74
THBS3-201ENST00000368378 LRRC37A3O60309 1634 aa10.46□□□□□ -0.74
THBS3-201ENST00000368378 ZRSR1Q15695 479 aaKnown RBP10.46□□□□□ -0.74
THBS3-201ENST00000368378 LMBR1LQ6UX01 489 aa10.46□□□□□ -0.74
THBS3-201ENST00000368378 ZNF496Q96IT1 587 aaPredicted RBP10.46□□□□□ -0.74
THBS3-201ENST00000368378 DBNLQ9UJU6 430 aaKnown RBP10.46□□□□□ -0.74
THBS3-201ENST00000368378 LTN1O94822 1766 aa10.46□□□□□ -0.74
THBS3-201ENST00000368378 A0A1B0GVL5 298 aa10.45□□□□□ -0.74
THBS3-201ENST00000368378 DDX58O95786 925 aaKnown RBP10.45□□□□□ -0.74
THBS3-201ENST00000368378 IGKV5-2P06315 115 aa10.45□□□□□ -0.74
THBS3-201ENST00000368378 TNNT1P13805 278 aa10.45□□□□□ -0.74
THBS3-201ENST00000368378 NECTIN1Q15223 517 aa10.45□□□□□ -0.74
THBS3-201ENST00000368378 LEO1Q8WVC0 666 aaPredicted RBP10.45□□□□□ -0.74
THBS3-201ENST00000368378 NEK1Q96PY6 1258 aa10.45□□□□□ -0.74
THBS3-201ENST00000368378 ZSWIM6Q9HCJ5 1215 aa10.45□□□□□ -0.74
THBS3-201ENST00000368378 RNF216Q9NWF9 866 aaPredicted RBP10.45□□□□□ -0.74
THBS3-201ENST00000368378 ZNF142P52746 1687 aaPredicted RBP10.45□□□□□ -0.74
THBS3-201ENST00000368378 GOLGA6L6A8MZA4 724 aa10.45□□□□□ -0.74
THBS3-201ENST00000368378 PSMA5P28066 241 aa10.45□□□□□ -0.74
THBS3-201ENST00000368378 MYRIPQ8NFW9 859 aa10.45□□□□□ -0.74
THBS3-201ENST00000368378 ZNF526Q8TF50 670 aaPredicted RBP10.45□□□□□ -0.74
THBS3-201ENST00000368378 PXDNQ92626 1479 aa10.45□□□□□ -0.74
THBS3-201ENST00000368378 USP27XA6NNY8 438 aa10.44□□□□□ -0.74
THBS3-201ENST00000368378 HSPA1LP34931 641 aa10.44□□□□□ -0.74
THBS3-201ENST00000368378 TOB2Q14106 344 aaPredicted RBP10.44□□□□□ -0.74
THBS3-201ENST00000368378 PI16Q6UXB8 463 aa10.44□□□□□ -0.74
THBS3-201ENST00000368378 KCNH5Q8NCM2 988 aa10.44□□□□□ -0.74
THBS3-201ENST00000368378 FAM200AQ8TCP9 573 aa10.44□□□□□ -0.74
THBS3-201ENST00000368378 PGBD1Q96JS3 809 aa10.44□□□□□ -0.74
THBS3-201ENST00000368378 STRCP1A6NGW2 1772 aa10.44□□□□□ -0.74
THBS3-201ENST00000368378 SMC2O95347 1197 aa10.44□□□□□ -0.74
THBS3-201ENST00000368378 APPP05067 770 aa10.44□□□□□ -0.74
THBS3-201ENST00000368378 CCDC144BQ3MJ40 725 aa10.44□□□□□ -0.74
THBS3-201ENST00000368378 C11orf57Q6ZUT1 292 aaPredicted RBP10.44□□□□□ -0.74
THBS3-201ENST00000368378 ERC1Q8IUD2 1116 aa10.44□□□□□ -0.74
THBS3-201ENST00000368378 TOMM22Q9NS69 142 aa10.44□□□□□ -0.74
THBS3-201ENST00000368378 CYP21A2P08686 494 aa10.44□□□□□ -0.74
THBS3-201ENST00000368378 HOXB7P09629 217 aa10.44□□□□□ -0.74
THBS3-201ENST00000368378 RPS6KB1P23443 525 aa10.44□□□□□ -0.74
THBS3-201ENST00000368378 GOLGA8FQ08AF8 430 aa10.44□□□□□ -0.74
THBS3-201ENST00000368378 GOLGA8DPQ0D2H9 430 aa10.44□□□□□ -0.74
THBS3-201ENST00000368378 CREBRFQ8IUR6 639 aa10.44□□□□□ -0.74
THBS3-201ENST00000368378 CCAR1Q8IX12 1150 aaKnown RBP10.44□□□□□ -0.74
THBS3-201ENST00000368378 MARCKSP29966 332 aaPredicted RBP10.43□□□□□ -0.74
THBS3-201ENST00000368378 ANKRD13DQ6ZTN6 518 aa10.43□□□□□ -0.74
THBS3-201ENST00000368378 LINS1Q8NG48 757 aa10.43□□□□□ -0.74
THBS3-201ENST00000368378 SH2B1Q9NRF2 756 aaPredicted RBP10.43□□□□□ -0.74
THBS3-201ENST00000368378 ALDH1L1O75891 902 aa10.43□□□□□ -0.74
THBS3-201ENST00000368378 SCRN1Q12765 414 aa10.43□□□□□ -0.74
THBS3-201ENST00000368378 AMOTQ4VCS5 1084 aa10.43□□□□□ -0.74
THBS3-201ENST00000368378 CACTINQ8WUQ7 758 aaKnown RBP10.43□□□□□ -0.74
THBS3-201ENST00000368378 MAP4K1Q92918 833 aa10.43□□□□□ -0.74
THBS3-201ENST00000368378 ZSCAN31Q96LW9 406 aaPredicted RBP10.43□□□□□ -0.74
THBS3-201ENST00000368378 TRERF1Q96PN7 1200 aa10.43□□□□□ -0.74
THBS3-201ENST00000368378 STRN4Q9NRL3 753 aa10.43□□□□□ -0.74
THBS3-201ENST00000368378 AOPEPQ8N6M6 819 aa10.42□□□□□ -0.74
THBS3-201ENST00000368378 FSIP1Q8NA03 581 aa10.42□□□□□ -0.74
THBS3-201ENST00000368378 KIAA1524Q8TCG1 905 aa10.42□□□□□ -0.74
THBS3-201ENST00000368378 USP28Q96RU2 1077 aa10.42□□□□□ -0.74
THBS3-201ENST00000368378 MARF1Q9Y4F3 1742 aaKnown RBP10.42□□□□□ -0.74
THBS3-201ENST00000368378 ERICH4A6NGS2 130 aa10.42□□□□□ -0.74
THBS3-201ENST00000368378 TAF5LO75529 589 aa10.42□□□□□ -0.74
THBS3-201ENST00000368378 MCM5P33992 734 aa10.42□□□□□ -0.74
THBS3-201ENST00000368378 MTX1Q13505 466 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms