RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 TSPYL6Q8N831 410 aa13.98□□□□□ -0.17
USF1-201ENST00000368019 LMBRD1Q9NUN5 540 aa13.98□□□□□ -0.17
USF1-201ENST00000368019 ERVV-1B6SEH8 477 aa13.97□□□□□ -0.17
USF1-201ENST00000368019 ZNF500O60304 480 aaPredicted RBP13.97□□□□□ -0.17
USF1-201ENST00000368019 MBD3O95983 291 aa13.97□□□□□ -0.17
USF1-201ENST00000368019 EIF4A1P60842 406 aaKnown RBP13.97□□□□□ -0.17
USF1-201ENST00000368019 OLFM4Q6UX06 510 aa13.97□□□□□ -0.17
USF1-201ENST00000368019 ADAMTSL1Q8N6G6 1762 aa13.96□□□□□ -0.17
USF1-201ENST00000368019 HMMRO75330 724 aa13.96□□□□□ -0.17
USF1-201ENST00000368019 MSNP26038 577 aaKnown RBP13.96□□□□□ -0.17
USF1-201ENST00000368019 CRY2Q49AN0 593 aa13.96□□□□□ -0.17
USF1-201ENST00000368019 RTKN2Q8IZC4 609 aa13.96□□□□□ -0.17
USF1-201ENST00000368019 MAP7D2Q96T17 732 aa13.96□□□□□ -0.17
USF1-201ENST00000368019 TAF1DQ9H5J8 278 aaPredicted RBP13.96□□□□□ -0.17
USF1-201ENST00000368019 CREBZFQ9NS37 354 aa13.96□□□□□ -0.17
USF1-201ENST00000368019 MAP3K15Q6ZN16 1313 aa13.95□□□□□ -0.18
USF1-201ENST00000368019 PASKQ96RG2 1323 aa13.95□□□□□ -0.18
USF1-201ENST00000368019 IQCA1LA6NCM1 817 aa13.95□□□□□ -0.18
USF1-201ENST00000368019 FAM177BA6PVY3 158 aa13.95□□□□□ -0.18
USF1-201ENST00000368019 HSPA1AP0DMV8 641 aaKnown RBP13.95□□□□□ -0.18
USF1-201ENST00000368019 HSPA1BP0DMV9 641 aaKnown RBP13.95□□□□□ -0.18
USF1-201ENST00000368019 ALDH1B1P30837 517 aa13.95□□□□□ -0.18
USF1-201ENST00000368019 CEP85Q6P2H3 762 aa13.95□□□□□ -0.18
USF1-201ENST00000368019 TTLL7Q6ZT98 887 aa13.95□□□□□ -0.18
USF1-201ENST00000368019 ZNF277Q9NRM2 450 aaPredicted RBP13.95□□□□□ -0.18
USF1-201ENST00000368019 RIC1Q4ADV7 1423 aa13.95□□□□□ -0.18
USF1-201ENST00000368019 ABCC12Q96J65 1359 aa13.95□□□□□ -0.18
USF1-201ENST00000368019 ZNF541Q9H0D2 1346 aa13.94□□□□□ -0.18
USF1-201ENST00000368019 FZD9O00144 591 aa13.94□□□□□ -0.18
USF1-201ENST00000368019 CHL1O00533 1208 aa13.94□□□□□ -0.18
USF1-201ENST00000368019 ANAPC15P60006 121 aa13.94□□□□□ -0.18
USF1-201ENST00000368019 LDHDQ86WU2 507 aa13.94□□□□□ -0.18
USF1-201ENST00000368019 C8orf58Q8NAV2 365 aa13.94□□□□□ -0.18
USF1-201ENST00000368019 THUMPD2Q9BTF0 503 aaKnown RBP13.94□□□□□ -0.18
USF1-201ENST00000368019 PDCL3Q9H2J4 239 aa13.94□□□□□ -0.18
USF1-201ENST00000368019 C1orf115Q9H7X2 142 aa13.94□□□□□ -0.18
USF1-201ENST00000368019 NOL7Q9UMY1 257 aaKnown RBP13.94□□□□□ -0.18
USF1-201ENST00000368019 ERC2O15083 957 aa13.93□□□□□ -0.18
USF1-201ENST00000368019 ITGBL1O95965 494 aaPredicted RBP13.93□□□□□ -0.18
USF1-201ENST00000368019 HOXA10P31260 410 aaPredicted RBP13.93□□□□□ -0.18
USF1-201ENST00000368019 CSPP1Q1MSJ5 1256 aa13.93□□□□□ -0.18
USF1-201ENST00000368019 ZSCAN23Q3MJ62 389 aa13.93□□□□□ -0.18
USF1-201ENST00000368019 NUTM1Q86Y26 1132 aa13.93□□□□□ -0.18
USF1-201ENST00000368019 SYNE4Q8N205 404 aa13.93□□□□□ -0.18
USF1-201ENST00000368019 INTS4Q96HW7 963 aaKnown RBP13.93□□□□□ -0.18
USF1-201ENST00000368019 NYXQ9GZU5 481 aa13.93□□□□□ -0.18
USF1-201ENST00000368019 AK9Q5TCS8 1911 aa13.93□□□□□ -0.18
USF1-201ENST00000368019 AOX1Q06278 1338 aa13.92□□□□□ -0.18
USF1-201ENST00000368019 UBN2Q6ZU65 1347 aa13.92□□□□□ -0.18
USF1-201ENST00000368019 COL4A5P29400 1685 aa13.92□□□□□ -0.18
USF1-201ENST00000368019 SDSP20132 328 aa13.92□□□□□ -0.18
USF1-201ENST00000368019 GTF2E1P29083 439 aaPredicted RBP13.92□□□□□ -0.18
USF1-201ENST00000368019 IARSP41252 1262 aaKnown RBP13.92□□□□□ -0.18
USF1-201ENST00000368019 LRSAM1Q6UWE0 723 aa13.92□□□□□ -0.18
USF1-201ENST00000368019 LRP10Q7Z4F1 713 aa13.92□□□□□ -0.18
USF1-201ENST00000368019 ZNF34Q8IZ26 560 aa13.92□□□□□ -0.18
USF1-201ENST00000368019 PSMD1Q99460 953 aa13.92□□□□□ -0.18
USF1-201ENST00000368019 CUL4AQ13619 759 aa13.91□□□□□ -0.18
USF1-201ENST00000368019 SUSD4Q5VX71 490 aa13.91□□□□□ -0.18
USF1-201ENST00000368019 CC2D2BQ6DHV5 1058 aa13.91□□□□□ -0.18
USF1-201ENST00000368019 MCTP1Q6DN14 999 aa13.91□□□□□ -0.18
USF1-201ENST00000368019 MTERF4Q7Z6M4 381 aaKnown RBP13.91□□□□□ -0.18
USF1-201ENST00000368019 TNS4Q8IZW8 715 aa13.91□□□□□ -0.18
USF1-201ENST00000368019 NTSR2O95665 410 aa13.9□□□□□ -0.18
USF1-201ENST00000368019 MYL6BP14649 208 aa13.9□□□□□ -0.18
USF1-201ENST00000368019 MCCP23508 829 aa13.9□□□□□ -0.18
USF1-201ENST00000368019 GPTP24298 496 aa13.9□□□□□ -0.18
USF1-201ENST00000368019 CCT4P50991 539 aaKnown RBP13.9□□□□□ -0.18
USF1-201ENST00000368019 PDIA6Q15084 440 aa13.9□□□□□ -0.18
USF1-201ENST00000368019 GIGYF2Q6Y7W6 1299 aaKnown RBP13.9□□□□□ -0.18
USF1-201ENST00000368019 KIF6Q6ZMV9 814 aa13.9□□□□□ -0.18
USF1-201ENST00000368019 KIAA1211Q6ZU35 1233 aa13.9□□□□□ -0.18
USF1-201ENST00000368019 SYAP1Q96A49 352 aaPredicted RBP13.9□□□□□ -0.18
USF1-201ENST00000368019 MKRN1Q9UHC7 482 aaKnown RBP13.9□□□□□ -0.18
USF1-201ENST00000368019 HACL1Q9UJ83 578 aa13.9□□□□□ -0.18
USF1-201ENST00000368019 CNTNAP1P78357 1384 aa13.9□□□□□ -0.18
USF1-201ENST00000368019 LTBP1Q14766 1721 aa13.9□□□□□ -0.18
USF1-201ENST00000368019 ANKRD36CQ5JPF3 1778 aa13.89□□□□□ -0.19
USF1-201ENST00000368019 EPHX2P34913 555 aa13.89□□□□□ -0.19
USF1-201ENST00000368019 GPC2Q8N158 579 aa13.89□□□□□ -0.19
USF1-201ENST00000368019 CRAMP1Q96RY5 1269 aa13.89□□□□□ -0.19
USF1-201ENST00000368019 ZBTB3Q9H5J0 574 aa13.89□□□□□ -0.19
USF1-201ENST00000368019 CCDC39Q9UFE4 941 aa13.89□□□□□ -0.19
USF1-201ENST00000368019 ZKSCAN5Q9Y2L8 839 aa13.89□□□□□ -0.19
USF1-201ENST00000368019 SALL3Q9BXA9 1300 aa13.89□□□□□ -0.19
USF1-201ENST00000368019 LAMB2P55268 1798 aa13.88□□□□□ -0.19
USF1-201ENST00000368019 GRIPAP1Q4V328 841 aa13.88□□□□□ -0.19
USF1-201ENST00000368019 CAVIN1Q6NZI2 390 aaKnown RBP13.88□□□□□ -0.19
USF1-201ENST00000368019 C3orf67Q6ZVT6 689 aa13.88□□□□□ -0.19
USF1-201ENST00000368019 PNMA8AQ86V59 439 aaPredicted RBP13.88□□□□□ -0.19
USF1-201ENST00000368019 RPGRQ92834 1020 aaKnown RBP13.88□□□□□ -0.19
USF1-201ENST00000368019 SRCIN1Q9C0H9 1055 aa13.88□□□□□ -0.19
USF1-201ENST00000368019 FOXD4L1Q9NU39 408 aa13.88□□□□□ -0.19
USF1-201ENST00000368019 TMEM88BA6NKF7 163 aa13.87□□□□□ -0.19
USF1-201ENST00000368019 BRD1O95696 1058 aa13.87□□□□□ -0.19
USF1-201ENST00000368019 UVSSAQ2YD98 709 aa13.87□□□□□ -0.19
USF1-201ENST00000368019 EAPPQ56P03 285 aaPredicted RBP13.87□□□□□ -0.19
USF1-201ENST00000368019 SLC10A5Q5PT55 438 aa13.87□□□□□ -0.19
USF1-201ENST00000368019 SLC51AQ86UW1 340 aa13.87□□□□□ -0.19
USF1-201ENST00000368019 JDP2Q8WYK2 163 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms