RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 ZSWIM4Q9H7M6 989 aa12.91□□□□□ -0.34
NECTIN4-201ENST00000368012 RIMS1Q86UR5 1692 aaKnown RBP12.9□□□□□ -0.34
NECTIN4-201ENST00000368012 TPM4P67936 248 aa12.9□□□□□ -0.34
NECTIN4-201ENST00000368012 ELF2Q15723 593 aa12.9□□□□□ -0.34
NECTIN4-201ENST00000368012 RALYLQ86SE5 291 aaKnown RBP12.9□□□□□ -0.34
NECTIN4-201ENST00000368012 MAP4K1Q92918 833 aa12.9□□□□□ -0.34
NECTIN4-201ENST00000368012 USP28Q96RU2 1077 aa12.9□□□□□ -0.34
NECTIN4-201ENST00000368012 ZNF215Q9UL58 517 aaPredicted RBP12.9□□□□□ -0.34
NECTIN4-201ENST00000368012 SSH2Q76I76 1423 aa12.9□□□□□ -0.34
NECTIN4-201ENST00000368012 EPHA10Q5JZY3 1008 aa12.9□□□□□ -0.34
NECTIN4-201ENST00000368012 NFXL1Q6ZNB6 911 aa12.9□□□□□ -0.34
NECTIN4-201ENST00000368012 MNS1Q8NEH6 495 aa12.9□□□□□ -0.34
NECTIN4-201ENST00000368012 CABLES1Q8TDN4 633 aa12.9□□□□□ -0.34
NECTIN4-201ENST00000368012 CLSTN2Q9H4D0 955 aa12.9□□□□□ -0.34
NECTIN4-201ENST00000368012 TTC21AQ8NDW8 1320 aa12.9□□□□□ -0.35
NECTIN4-201ENST00000368012 ST3GAL1Q11201 340 aa12.89□□□□□ -0.35
NECTIN4-201ENST00000368012 ANKRD13DQ6ZTN6 518 aa12.89□□□□□ -0.35
NECTIN4-201ENST00000368012 TMEM2Q9UHN6 1383 aa12.89□□□□□ -0.35
NECTIN4-201ENST00000368012 RRP12Q5JTH9 1297 aaKnown RBP12.89□□□□□ -0.35
NECTIN4-201ENST00000368012 SYT10Q6XYQ8 523 aa12.89□□□□□ -0.35
NECTIN4-201ENST00000368012 ZNF396Q96N95 335 aaPredicted RBP12.89□□□□□ -0.35
NECTIN4-201ENST00000368012 IFNKQ9P0W0 207 aa12.89□□□□□ -0.35
NECTIN4-201ENST00000368012 RNMTO43148 476 aaKnown RBP12.89□□□□□ -0.35
NECTIN4-201ENST00000368012 URI1O94763 535 aaPredicted RBP12.89□□□□□ -0.35
NECTIN4-201ENST00000368012 GOLGA8FQ08AF8 430 aa12.89□□□□□ -0.35
NECTIN4-201ENST00000368012 GOLGA8DPQ0D2H9 430 aa12.89□□□□□ -0.35
NECTIN4-201ENST00000368012 CFAP100Q494V2 611 aa12.89□□□□□ -0.35
NECTIN4-201ENST00000368012 GTF3C6Q969F1 213 aa12.89□□□□□ -0.35
NECTIN4-201ENST00000368012 NAT10Q9H0A0 1025 aaKnown RBP12.89□□□□□ -0.35
NECTIN4-201ENST00000368012 A0A0G2JLW4 131 aa12.88□□□□□ -0.35
NECTIN4-201ENST00000368012 GIGYF1O75420 1035 aaPredicted RBP12.88□□□□□ -0.35
NECTIN4-201ENST00000368012 TOB2Q14106 344 aaPredicted RBP12.88□□□□□ -0.35
NECTIN4-201ENST00000368012 KRT32Q14532 448 aa12.88□□□□□ -0.35
NECTIN4-201ENST00000368012 KIF18AQ8NI77 898 aa12.88□□□□□ -0.35
NECTIN4-201ENST00000368012 ORAI2Q96SN7 254 aa12.88□□□□□ -0.35
NECTIN4-201ENST00000368012 AOX1Q06278 1338 aa12.88□□□□□ -0.35
NECTIN4-201ENST00000368012 CYP21A2P08686 494 aa12.88□□□□□ -0.35
NECTIN4-201ENST00000368012 IFIT1P09914 478 aaKnown RBP12.88□□□□□ -0.35
NECTIN4-201ENST00000368012 STX1AQ16623 288 aa12.88□□□□□ -0.35
NECTIN4-201ENST00000368012 ST7Q9NRC1 585 aa12.88□□□□□ -0.35
NECTIN4-201ENST00000368012 ANO10Q9NW15 660 aa12.88□□□□□ -0.35
NECTIN4-201ENST00000368012 SFPQP23246 707 aaKnown RBP eCLIP12.88□□□□□ -0.35
NECTIN4-201ENST00000368012 SCRN1Q12765 414 aa12.88□□□□□ -0.35
NECTIN4-201ENST00000368012 DDX17Q92841 729 aaKnown RBP12.88□□□□□ -0.35
NECTIN4-201ENST00000368012 SIRT1Q96EB6 747 aa12.88□□□□□ -0.35
NECTIN4-201ENST00000368012 C8orf76Q96K31 380 aa12.88□□□□□ -0.35
NECTIN4-201ENST00000368012 DBNLQ9UJU6 430 aaKnown RBP12.88□□□□□ -0.35
NECTIN4-201ENST00000368012 RICTORQ6R327 1708 aa12.88□□□□□ -0.35
NECTIN4-201ENST00000368012 MCMDC2Q4G0Z9 681 aa12.87□□□□□ -0.35
NECTIN4-201ENST00000368012 AKAP4Q5JQC9 854 aa12.87□□□□□ -0.35
NECTIN4-201ENST00000368012 TMEM87AQ8NBN3 555 aa12.87□□□□□ -0.35
NECTIN4-201ENST00000368012 TAF5LO75529 589 aa12.87□□□□□ -0.35
NECTIN4-201ENST00000368012 SPECC1Q5M775 1068 aa12.87□□□□□ -0.35
NECTIN4-201ENST00000368012 DNAI1Q9UI46 699 aa12.87□□□□□ -0.35
NECTIN4-201ENST00000368012 USP31Q70CQ4 1352 aa12.87□□□□□ -0.35
NECTIN4-201ENST00000368012 SMTNL1A8MU46 457 aa12.87□□□□□ -0.35
NECTIN4-201ENST00000368012 NCBP1Q09161 790 aaKnown RBP12.87□□□□□ -0.35
NECTIN4-201ENST00000368012 SNW1Q13573 536 aaKnown RBP12.87□□□□□ -0.35
NECTIN4-201ENST00000368012 KDRP35968 1356 aa12.86□□□□□ -0.35
NECTIN4-201ENST00000368012 GOLGA8BA8MQT2 603 aa12.86□□□□□ -0.35
NECTIN4-201ENST00000368012 PES1O00541 588 aaKnown RBP12.86□□□□□ -0.35
NECTIN4-201ENST00000368012 ALDH1L1O75891 902 aa12.86□□□□□ -0.35
NECTIN4-201ENST00000368012 GTPBP4Q9BZE4 634 aaKnown RBP12.86□□□□□ -0.35
NECTIN4-201ENST00000368012 ORC3Q9UBD5 711 aaPredicted RBP12.86□□□□□ -0.35
NECTIN4-201ENST00000368012 U3KPZ7 1027 aaPredicted RBP12.86□□□□□ -0.35
NECTIN4-201ENST00000368012 THEMISQ8N1K5 641 aaPredicted RBP12.86□□□□□ -0.35
NECTIN4-201ENST00000368012 CPLX3Q8WVH0 158 aa12.86□□□□□ -0.35
NECTIN4-201ENST00000368012 TM6SF1Q9BZW5 370 aa12.86□□□□□ -0.35
NECTIN4-201ENST00000368012 GCP02774 474 aa12.85□□□□□ -0.35
NECTIN4-201ENST00000368012 KLF18A0A0U1RQI7 1052 aa12.85□□□□□ -0.35
NECTIN4-201ENST00000368012 SLC3A2P08195 630 aaKnown RBP12.85□□□□□ -0.35
NECTIN4-201ENST00000368012 CABP4P57796 275 aa12.85□□□□□ -0.35
NECTIN4-201ENST00000368012 TRDNQ13061 729 aa12.85□□□□□ -0.35
NECTIN4-201ENST00000368012 ERCC6LQ2NKX8 1250 aa12.85□□□□□ -0.35
NECTIN4-201ENST00000368012 TNNI3KQ59H18 835 aa12.85□□□□□ -0.35
NECTIN4-201ENST00000368012 UTP14CQ5TAP6 766 aaKnown RBP12.85□□□□□ -0.35
NECTIN4-201ENST00000368012 IP6K1Q92551 441 aa12.85□□□□□ -0.35
NECTIN4-201ENST00000368012 ZNF496Q96IT1 587 aaPredicted RBP12.85□□□□□ -0.35
NECTIN4-201ENST00000368012 FPGT-TNNI3KV9GXZ4 949 aa12.85□□□□□ -0.35
NECTIN4-201ENST00000368012 LRRC8AQ8IWT6 810 aa12.85□□□□□ -0.35
NECTIN4-201ENST00000368012 IDH1O75874 414 aaKnown RBP12.84□□□□□ -0.35
NECTIN4-201ENST00000368012 TTC39AQ5SRH9 613 aa12.84□□□□□ -0.35
NECTIN4-201ENST00000368012 MICU3Q86XE3 530 aa12.84□□□□□ -0.35
NECTIN4-201ENST00000368012 FUCA2Q9BTY2 467 aa12.84□□□□□ -0.35
NECTIN4-201ENST00000368012 PEAK1Q9H792 1746 aa12.84□□□□□ -0.35
NECTIN4-201ENST00000368012 GCKRQ14397 625 aa12.84□□□□□ -0.35
NECTIN4-201ENST00000368012 SPTLC3Q9NUV7 552 aa12.84□□□□□ -0.35
NECTIN4-201ENST00000368012 KAT6BQ8WYB5 2073 aa12.84□□□□□ -0.35
NECTIN4-201ENST00000368012 DDX21Q9NR30 783 aaKnown RBP eCLIP12.84□□□□□ -0.35
NECTIN4-201ENST00000368012 PAXBP1Q9Y5B6 917 aa12.84□□□□□ -0.35
NECTIN4-201ENST00000368012 KLHL10Q6JEL2 608 aa12.83□□□□□ -0.36
NECTIN4-201ENST00000368012 DHX32Q7L7V1 743 aaKnown RBP12.83□□□□□ -0.36
NECTIN4-201ENST00000368012 UBXN4Q92575 508 aa12.83□□□□□ -0.36
NECTIN4-201ENST00000368012 XPO4Q9C0E2 1151 aaKnown RBP12.83□□□□□ -0.36
NECTIN4-201ENST00000368012 GOLPH3LQ9H4A5 285 aa12.83□□□□□ -0.36
NECTIN4-201ENST00000368012 ZSCAN16Q9H4T2 348 aaPredicted RBP12.83□□□□□ -0.36
NECTIN4-201ENST00000368012 HMG20BQ9P0W2 317 aa12.83□□□□□ -0.36
NECTIN4-201ENST00000368012 ADCY9O60503 1353 aa12.83□□□□□ -0.36
NECTIN4-201ENST00000368012 IGKV5-2P06315 115 aa12.83□□□□□ -0.36
NECTIN4-201ENST00000368012 TATP17735 454 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms