RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 MICALL2Q8IY33 904 aa19.01■□□□□ 0.63
CTSD-202ENST00000367196 SEC31BQ9NQW1 1179 aa19.01■□□□□ 0.63
CTSD-202ENST00000367196 PGAP2Q9UHJ9 254 aa19.01■□□□□ 0.63
CTSD-202ENST00000367196 WDR33Q9C0J8 1336 aaKnown RBP19■□□□□ 0.63
CTSD-202ENST00000367196 PSMD14O00487 310 aa19■□□□□ 0.63
CTSD-202ENST00000367196 UFL1O94874 794 aa19■□□□□ 0.63
CTSD-202ENST00000367196 PAXIP1Q6ZW49 1069 aaPredicted RBP19■□□□□ 0.63
CTSD-202ENST00000367196 COL4A1P02462 1669 aa19■□□□□ 0.63
CTSD-202ENST00000367196 THSD7BQ9C0I4 1608 aa19■□□□□ 0.63
CTSD-202ENST00000367196 XDHP47989 1333 aa19■□□□□ 0.63
CTSD-202ENST00000367196 SLC4A2P04920 1241 aa18.99■□□□□ 0.63
CTSD-202ENST00000367196 CTSWP56202 376 aa18.99■□□□□ 0.63
CTSD-202ENST00000367196 CDC37L1Q7L3B6 337 aa18.99■□□□□ 0.63
CTSD-202ENST00000367196 TLL2Q9Y6L7 1015 aa18.99■□□□□ 0.63
CTSD-202ENST00000367196 TRAF5O00463 557 aa18.98■□□□□ 0.63
CTSD-202ENST00000367196 FOXN1O15353 648 aa18.98■□□□□ 0.63
CTSD-202ENST00000367196 WDR63Q8IWG1 891 aa18.98■□□□□ 0.63
CTSD-202ENST00000367196 TRPM4Q8TD43 1214 aa18.98■□□□□ 0.63
CTSD-202ENST00000367196 PRDM10Q9NQV6 1147 aa18.98■□□□□ 0.63
CTSD-202ENST00000367196 WBP1LQ9NX94 342 aa18.98■□□□□ 0.63
CTSD-202ENST00000367196 FANCIQ9NVI1 1328 aa18.98■□□□□ 0.63
CTSD-202ENST00000367196 RTL9Q8NET4 1388 aa18.97■□□□□ 0.63
CTSD-202ENST00000367196 CELF2O95319 508 aaKnown RBP18.97■□□□□ 0.63
CTSD-202ENST00000367196 IGKV5-2P06315 115 aa18.97■□□□□ 0.63
CTSD-202ENST00000367196 DOK7Q18PE1 504 aa18.97■□□□□ 0.63
CTSD-202ENST00000367196 CAPNS2Q96L46 248 aa18.97■□□□□ 0.63
CTSD-202ENST00000367196 CCDC85AQ96PX6 553 aaPredicted RBP18.97■□□□□ 0.63
CTSD-202ENST00000367196 BEGAINQ9BUH8 593 aa18.97■□□□□ 0.63
CTSD-202ENST00000367196 MYH16Q9H6N6 1097 aa18.97■□□□□ 0.63
CTSD-202ENST00000367196 ZBTB12Q9Y330 459 aaPredicted RBP18.97■□□□□ 0.63
CTSD-202ENST00000367196 NEURL1BA8MQ27 555 aa18.96■□□□□ 0.63
CTSD-202ENST00000367196 ATP2B4P23634 1241 aa18.96■□□□□ 0.63
CTSD-202ENST00000367196 FLIIQ13045 1269 aa18.96■□□□□ 0.63
CTSD-202ENST00000367196 CST9Q5W186 159 aa18.96■□□□□ 0.63
CTSD-202ENST00000367196 JARID2Q92833 1246 aaPredicted RBP18.96■□□□□ 0.63
CTSD-202ENST00000367196 HHIPL1Q96JK4 782 aa18.96■□□□□ 0.63
CTSD-202ENST00000367196 GLIS2Q9BZE0 524 aaPredicted RBP18.96■□□□□ 0.63
CTSD-202ENST00000367196 ZNF609O15014 1411 aa18.95■□□□□ 0.62
CTSD-202ENST00000367196 HIRAP54198 1017 aaPredicted RBP18.95■□□□□ 0.62
CTSD-202ENST00000367196 FMR1Q06787 632 aaKnown RBP eCLIP18.95■□□□□ 0.62
CTSD-202ENST00000367196 FKBP5Q13451 457 aaPredicted RBP18.95■□□□□ 0.62
CTSD-202ENST00000367196 PSME4Q14997 1843 aa18.95■□□□□ 0.62
CTSD-202ENST00000367196 VIL1P09327 827 aaKnown RBP18.94■□□□□ 0.62
CTSD-202ENST00000367196 CWF19L2Q2TBE0 894 aaKnown RBP18.94■□□□□ 0.62
CTSD-202ENST00000367196 SAPCD2Q86UD0 394 aa18.94■□□□□ 0.62
CTSD-202ENST00000367196 TTLL11Q8NHH1 800 aa18.94■□□□□ 0.62
CTSD-202ENST00000367196 DNAAF4Q8WXU2 420 aa18.94■□□□□ 0.62
CTSD-202ENST00000367196 GPR101Q96P66 508 aaPredicted RBP18.94■□□□□ 0.62
CTSD-202ENST00000367196 BSDC1Q9NW68 430 aaPredicted RBP18.94■□□□□ 0.62
CTSD-202ENST00000367196 SPEF2Q9C093 1822 aa18.94■□□□□ 0.62
CTSD-202ENST00000367196 SCN9AQ15858 1988 aa18.93■□□□□ 0.62
CTSD-202ENST00000367196 IGHMBP2P38935 993 aaKnown RBP18.93■□□□□ 0.62
CTSD-202ENST00000367196 GRM1Q13255 1194 aa18.93■□□□□ 0.62
CTSD-202ENST00000367196 TBC1D10BQ4KMP7 808 aaPredicted RBP18.93■□□□□ 0.62
CTSD-202ENST00000367196 CYP4F22Q6NT55 531 aa18.93■□□□□ 0.62
CTSD-202ENST00000367196 SAMD7Q7Z3H4 446 aa18.93■□□□□ 0.62
CTSD-202ENST00000367196 UBE3BQ7Z3V4 1068 aa18.93■□□□□ 0.62
CTSD-202ENST00000367196 AGBL3Q8NEM8 1001 aa18.93■□□□□ 0.62
CTSD-202ENST00000367196 DCPSQ96C86 337 aaKnown RBP18.93■□□□□ 0.62
CTSD-202ENST00000367196 ZNF408Q9H9D4 720 aa18.93■□□□□ 0.62
CTSD-202ENST00000367196 MED23Q9ULK4 1368 aa18.93■□□□□ 0.62
CTSD-202ENST00000367196 SHTN1A0MZ66 631 aa18.92■□□□□ 0.62
CTSD-202ENST00000367196 H7C1W4 665 aa18.92■□□□□ 0.62
CTSD-202ENST00000367196 MAP2K2P36507 400 aa18.92■□□□□ 0.62
CTSD-202ENST00000367196 GCKRQ14397 625 aa18.92■□□□□ 0.62
CTSD-202ENST00000367196 KIF4BQ2VIQ3 1234 aa18.92■□□□□ 0.62
CTSD-202ENST00000367196 G2E3Q7L622 706 aa18.92■□□□□ 0.62
CTSD-202ENST00000367196 KRT26Q7Z3Y9 468 aa18.92■□□□□ 0.62
CTSD-202ENST00000367196 PODNQ7Z5L7 613 aa18.92■□□□□ 0.62
CTSD-202ENST00000367196 LINS1Q8NG48 757 aa18.92■□□□□ 0.62
CTSD-202ENST00000367196 PLA2G12BQ9BX93 195 aa18.92■□□□□ 0.62
CTSD-202ENST00000367196 GREM2Q9H772 168 aa18.92■□□□□ 0.62
CTSD-202ENST00000367196 RSBN1LQ6PCB5 846 aaPredicted RBP18.91■□□□□ 0.62
CTSD-202ENST00000367196 SALL2Q9Y467 1007 aaPredicted RBP18.91■□□□□ 0.62
CTSD-202ENST00000367196 CAPN15O75808 1086 aa18.9■□□□□ 0.62
CTSD-202ENST00000367196 USP48Q86UV5 1035 aa18.9■□□□□ 0.62
CTSD-202ENST00000367196 KCNQ5Q9NR82 932 aa18.9■□□□□ 0.62
CTSD-202ENST00000367196 CA12O43570 354 aa18.89■□□□□ 0.61
CTSD-202ENST00000367196 VAMP4O75379 141 aa18.89■□□□□ 0.61
CTSD-202ENST00000367196 LBX1P52954 281 aa18.89■□□□□ 0.61
CTSD-202ENST00000367196 EXOSC9Q06265 439 aaKnown RBP18.89■□□□□ 0.61
CTSD-202ENST00000367196 RBM26Q5T8P6 1007 aaKnown RBP18.89■□□□□ 0.61
CTSD-202ENST00000367196 SULF1Q8IWU6 871 aa18.89■□□□□ 0.61
CTSD-202ENST00000367196 MPHOSPH8Q99549 860 aa18.89■□□□□ 0.61
CTSD-202ENST00000367196 ANKRD2Q9GZV1 360 aa18.89■□□□□ 0.61
CTSD-202ENST00000367196 MINPP1Q9UNW1 487 aa18.89■□□□□ 0.61
CTSD-202ENST00000367196 USP17L3A6NCW0 530 aa18.88■□□□□ 0.61
CTSD-202ENST00000367196 USP17L4A6NCW7 530 aa18.88■□□□□ 0.61
CTSD-202ENST00000367196 HSPA8P11142 646 aaKnown RBP18.88■□□□□ 0.61
CTSD-202ENST00000367196 ITGA6P23229 1130 aa18.88■□□□□ 0.61
CTSD-202ENST00000367196 CCT4P50991 539 aaKnown RBP18.88■□□□□ 0.61
CTSD-202ENST00000367196 ZNF280AP59817 542 aaPredicted RBP18.88■□□□□ 0.61
CTSD-202ENST00000367196 USP17L1Q7RTZ2 530 aa18.88■□□□□ 0.61
CTSD-202ENST00000367196 LEMD3Q9Y2U8 911 aa18.88■□□□□ 0.61
CTSD-202ENST00000367196 MYO3BQ8WXR4 1341 aa18.88■□□□□ 0.61
CTSD-202ENST00000367196 EGFRP00533 1210 aa18.87■□□□□ 0.61
CTSD-202ENST00000367196 POLR2AP24928 1970 aaKnown RBP18.87■□□□□ 0.61
CTSD-202ENST00000367196 HUNKP57058 714 aa18.87■□□□□ 0.61
CTSD-202ENST00000367196 FAM9BQ8IZU0 186 aa18.87■□□□□ 0.61
CTSD-202ENST00000367196 C2orf69Q8N8R5 385 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms