RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 C17orf53Q8N3J3 647 aaPredicted RBP17.49■□□□□ 0.39
PRKN-204ENST00000366896 HCLS1P14317 486 aaPredicted RBP17.48■□□□□ 0.39
PRKN-204ENST00000366896 ST3GAL1Q11201 340 aa17.48■□□□□ 0.39
PRKN-204ENST00000366896 NECTIN1Q15223 517 aa17.48■□□□□ 0.39
PRKN-204ENST00000366896 KAZALD1Q96I82 304 aa17.48■□□□□ 0.39
PRKN-204ENST00000366896 SUCLG2Q96I99 432 aa17.48■□□□□ 0.39
PRKN-204ENST00000366896 BCL11BQ9C0K0 894 aaPredicted RBP17.48■□□□□ 0.39
PRKN-204ENST00000366896 FIBPO43427 364 aa17.48■□□□□ 0.39
PRKN-204ENST00000366896 KDM4AO75164 1064 aa17.48■□□□□ 0.39
PRKN-204ENST00000366896 LINS1Q8NG48 757 aa17.48■□□□□ 0.39
PRKN-204ENST00000366896 PDRG1Q9NUG6 133 aa17.48■□□□□ 0.39
PRKN-204ENST00000366896 CICQ96RK0 1608 aaPredicted RBP17.47■□□□□ 0.39
PRKN-204ENST00000366896 GJB2P29033 226 aa17.47■□□□□ 0.39
PRKN-204ENST00000366896 COL9A3Q14050 684 aaPredicted RBP17.47■□□□□ 0.39
PRKN-204ENST00000366896 PDIA6Q15084 440 aa17.47■□□□□ 0.39
PRKN-204ENST00000366896 DNAJC10Q8IXB1 793 aa17.47■□□□□ 0.39
PRKN-204ENST00000366896 FAM227BQ96M60 508 aa17.47■□□□□ 0.39
PRKN-204ENST00000366896 GTPBP4Q9BZE4 634 aaKnown RBP17.47■□□□□ 0.39
PRKN-204ENST00000366896 CYP46A1Q9Y6A2 500 aa17.47■□□□□ 0.39
PRKN-204ENST00000366896 ZNF831Q5JPB2 1677 aa17.46■□□□□ 0.39
PRKN-204ENST00000366896 LOC102724428A0A0B4J2F2 783 aa17.46■□□□□ 0.39
PRKN-204ENST00000366896 SIK1P57059 783 aa17.46■□□□□ 0.39
PRKN-204ENST00000366896 TEX13AQ9BXU3 409 aaPredicted RBP17.46■□□□□ 0.39
PRKN-204ENST00000366896 ALDH8A1Q9H2A2 487 aaPredicted RBP17.46■□□□□ 0.39
PRKN-204ENST00000366896 BICC1Q9H694 974 aaKnown RBP17.46■□□□□ 0.39
PRKN-204ENST00000366896 BCL2L12Q9HB09 334 aa17.46■□□□□ 0.39
PRKN-204ENST00000366896 TLR7Q9NYK1 1049 aaKnown RBP17.46■□□□□ 0.39
PRKN-204ENST00000366896 CCDC171Q6TFL3 1326 aa17.46■□□□□ 0.39
PRKN-204ENST00000366896 SASH1O94885 1247 aa17.46■□□□□ 0.38
PRKN-204ENST00000366896 PPP4R3BQ5MIZ7 849 aa17.46■□□□□ 0.38
PRKN-204ENST00000366896 DDX21Q9NR30 783 aaKnown RBP eCLIP17.46■□□□□ 0.388e-6■■□□□ 14
PRKN-204ENST00000366896 ZKSCAN1P17029 563 aaPredicted RBP17.45■□□□□ 0.38
PRKN-204ENST00000366896 CBX1P83916 185 aa17.45■□□□□ 0.38
PRKN-204ENST00000366896 AIMP1Q12904 312 aaKnown RBP17.45■□□□□ 0.38
PRKN-204ENST00000366896 ATP2B3Q16720 1220 aa17.45■□□□□ 0.38
PRKN-204ENST00000366896 MAP4K1Q92918 833 aa17.45■□□□□ 0.38
PRKN-204ENST00000366896 EAF2Q96CJ1 260 aaPredicted RBP17.45■□□□□ 0.38
PRKN-204ENST00000366896 FUCA2Q9BTY2 467 aa17.45■□□□□ 0.38
PRKN-204ENST00000366896 MTMR6Q9Y217 621 aa17.45■□□□□ 0.38
PRKN-204ENST00000366896 LY75O60449 1722 aa17.45■□□□□ 0.38
PRKN-204ENST00000366896 GRM8O00222 908 aa17.45■□□□□ 0.38
PRKN-204ENST00000366896 TRIM37O94972 964 aa17.45■□□□□ 0.38
PRKN-204ENST00000366896 DDX58O95786 925 aaKnown RBP17.45■□□□□ 0.38
PRKN-204ENST00000366896 NMIQ13287 307 aaPredicted RBP17.45■□□□□ 0.38
PRKN-204ENST00000366896 NECAB1Q8N987 351 aa17.45■□□□□ 0.38
PRKN-204ENST00000366896 KIAA1524Q8TCG1 905 aa17.45■□□□□ 0.38
PRKN-204ENST00000366896 CCDC8Q9H0W5 538 aaPredicted RBP17.45■□□□□ 0.38
PRKN-204ENST00000366896 RBM8AQ9Y5S9 174 aaKnown RBP17.45■□□□□ 0.38
PRKN-204ENST00000366896 DNM1Q05193 864 aaKnown RBP17.44■□□□□ 0.38
PRKN-204ENST00000366896 ME3Q16798 604 aa17.44■□□□□ 0.38
PRKN-204ENST00000366896 EP400Q96L91 3159 aa17.44■□□□□ 0.38
PRKN-204ENST00000366896 PSMA5P28066 241 aa17.44■□□□□ 0.38
PRKN-204ENST00000366896 ATP6V1AP38606 617 aa17.44■□□□□ 0.38
PRKN-204ENST00000366896 FAM177BA6PVY3 158 aa17.43■□□□□ 0.38
PRKN-204ENST00000366896 CREB3L3Q68CJ9 461 aa17.43■□□□□ 0.38
PRKN-204ENST00000366896 SIL1Q9H173 461 aa17.43■□□□□ 0.38
PRKN-204ENST00000366896 NBPF26B4DH59 902 aa17.43■□□□□ 0.38
PRKN-204ENST00000366896 A1BGP04217 495 aa17.43■□□□□ 0.38
PRKN-204ENST00000366896 CYP19A1P11511 503 aaPredicted RBP17.43■□□□□ 0.38
PRKN-204ENST00000366896 PIP4K2AP48426 406 aaPredicted RBP17.43■□□□□ 0.38
PRKN-204ENST00000366896 ITPK1Q13572 414 aa17.43■□□□□ 0.38
PRKN-204ENST00000366896 NBPF14Q5TI25 921 aa17.43■□□□□ 0.38
PRKN-204ENST00000366896 NBPF10Q6P3W6 841 aaKnown RBP17.43■□□□□ 0.38
PRKN-204ENST00000366896 LRP10Q7Z4F1 713 aa17.43■□□□□ 0.38
PRKN-204ENST00000366896 NBPF15Q8N660 670 aa17.43■□□□□ 0.38
PRKN-204ENST00000366896 KLHDC4Q8TBB5 520 aa17.43■□□□□ 0.38
PRKN-204ENST00000366896 TPCN1Q9ULQ1 816 aa17.43■□□□□ 0.38
PRKN-204ENST00000366896 STARD3NLO95772 234 aa17.42■□□□□ 0.38
PRKN-204ENST00000366896 TPM3P06753 285 aa17.42■□□□□ 0.38
PRKN-204ENST00000366896 KCNF1Q9H3M0 494 aa17.42■□□□□ 0.38
PRKN-204ENST00000366896 COL5A3P25940 1745 aaPredicted RBP17.42■□□□□ 0.38
PRKN-204ENST00000366896 A0A0D9SFI3 127 aa17.42■□□□□ 0.38
PRKN-204ENST00000366896 VPS37CA5D8V6 355 aaPredicted RBP17.42■□□□□ 0.38
PRKN-204ENST00000366896 MYL6BP14649 208 aa17.42■□□□□ 0.38
PRKN-204ENST00000366896 ANKRD1Q15327 319 aa17.42■□□□□ 0.38
PRKN-204ENST00000366896 TSGA10IPQ3SY00 556 aa17.42■□□□□ 0.38
PRKN-204ENST00000366896 TAF6LQ9Y6J9 622 aa17.42■□□□□ 0.38
PRKN-204ENST00000366896 IGKV5-2P06315 115 aa17.41■□□□□ 0.38
PRKN-204ENST00000366896 KCNJ4P48050 445 aa17.41■□□□□ 0.38
PRKN-204ENST00000366896 G3BP1Q13283 466 aaKnown RBP eCLIP17.41■□□□□ 0.38
PRKN-204ENST00000366896 PDCL2Q8N4E4 241 aa17.41■□□□□ 0.38
PRKN-204ENST00000366896 ANKRD7Q92527 254 aa17.41■□□□□ 0.38
PRKN-204ENST00000366896 PODXL2Q9NZ53 605 aa17.41■□□□□ 0.38
PRKN-204ENST00000366896 SLC27A2O14975 620 aa17.41■□□□□ 0.38
PRKN-204ENST00000366896 AP5Z1O43299 807 aa17.41■□□□□ 0.38
PRKN-204ENST00000366896 KIF20AO95235 890 aa17.41■□□□□ 0.38
PRKN-204ENST00000366896 GIMAP6Q6P9H5 292 aa17.41■□□□□ 0.38
PRKN-204ENST00000366896 TCEANC2Q96MN5 208 aa17.41■□□□□ 0.38
PRKN-204ENST00000366896 BOLA2Q9H3K6 86 aa17.41■□□□□ 0.38
PRKN-204ENST00000366896 ELP1O95163 1332 aa17.4■□□□□ 0.38
PRKN-204ENST00000366896 RIOK3O14730 519 aaKnown RBP17.4■□□□□ 0.38
PRKN-204ENST00000366896 PDCP20941 246 aa17.4■□□□□ 0.38
PRKN-204ENST00000366896 RNF20Q5VTR2 975 aa17.4■□□□□ 0.38
PRKN-204ENST00000366896 HMG20BQ9P0W2 317 aa17.4■□□□□ 0.38
PRKN-204ENST00000366896 PYCARDQ9ULZ3 195 aa17.4■□□□□ 0.38
PRKN-204ENST00000366896 MED23Q9ULK4 1368 aa17.4■□□□□ 0.38
PRKN-204ENST00000366896 CHAF1AQ13111 956 aaPredicted RBP17.4■□□□□ 0.38
PRKN-204ENST00000366896 RREB1Q92766 1687 aa17.39■□□□□ 0.37
PRKN-204ENST00000366896 CTIFO43310 598 aaKnown RBP17.39■□□□□ 0.37
PRKN-204ENST00000366896 COL15A1P39059 1388 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms