RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 DUOX1Q9NRD9 1551 aa14.35□□□□□ -0.11
CSNK1E-202ENST00000366216 CENPFP49454 3210 aa14.35□□□□□ -0.11
CSNK1E-202ENST00000366216 H7C1D1 291 aa14.35□□□□□ -0.11
CSNK1E-202ENST00000366216 RAD17O75943 681 aa14.35□□□□□ -0.11
CSNK1E-202ENST00000366216 EGFRP00533 1210 aa14.35□□□□□ -0.11
CSNK1E-202ENST00000366216 PKN2Q16513 984 aaKnown RBP14.35□□□□□ -0.11
CSNK1E-202ENST00000366216 HABP4Q5JVS0 413 aaKnown RBP14.35□□□□□ -0.11
CSNK1E-202ENST00000366216 ZNF34Q8IZ26 560 aa14.35□□□□□ -0.11
CSNK1E-202ENST00000366216 RTFDC1Q9BY42 306 aaPredicted RBP14.35□□□□□ -0.11
CSNK1E-202ENST00000366216 MAP3K15Q6ZN16 1313 aa14.35□□□□□ -0.11
CSNK1E-202ENST00000366216 CEP290O15078 2479 aa14.34□□□□□ -0.11
CSNK1E-202ENST00000366216 COL4A1P02462 1669 aa14.34□□□□□ -0.11
CSNK1E-202ENST00000366216 ERVV-1B6SEH8 477 aa14.34□□□□□ -0.11
CSNK1E-202ENST00000366216 SLC10A3P09131 477 aa14.34□□□□□ -0.11
CSNK1E-202ENST00000366216 RARSP54136 660 aaKnown RBP14.34□□□□□ -0.11
CSNK1E-202ENST00000366216 KRT26Q7Z3Y9 468 aa14.34□□□□□ -0.11
CSNK1E-202ENST00000366216 MICALL2Q8IY33 904 aa14.34□□□□□ -0.11
CSNK1E-202ENST00000366216 TSR2Q969E8 191 aaKnown RBP14.34□□□□□ -0.11
CSNK1E-202ENST00000366216 CSRNP1Q96S65 589 aa14.34□□□□□ -0.11
CSNK1E-202ENST00000366216 KIAA2012Q0VF49 1180 aa14.33□□□□□ -0.12
CSNK1E-202ENST00000366216 ZNF428Q96B54 188 aa14.33□□□□□ -0.12
CSNK1E-202ENST00000366216 ZBTB3Q9H5J0 574 aa14.33□□□□□ -0.12
CSNK1E-202ENST00000366216 HTTP42858 3142 aa14.33□□□□□ -0.12
CSNK1E-202ENST00000366216 ABCC4O15439 1325 aa14.33□□□□□ -0.12
CSNK1E-202ENST00000366216 EXOSC9Q06265 439 aaKnown RBP14.32□□□□□ -0.12
CSNK1E-202ENST00000366216 DPP8Q6V1X1 898 aaPredicted RBP14.32□□□□□ -0.12
CSNK1E-202ENST00000366216 LRP10Q7Z4F1 713 aa14.32□□□□□ -0.12
CSNK1E-202ENST00000366216 REM2Q8IYK8 340 aaPredicted RBP14.32□□□□□ -0.12
CSNK1E-202ENST00000366216 THUMPD2Q9BTF0 503 aaKnown RBP14.32□□□□□ -0.12
CSNK1E-202ENST00000366216 PLIN1O60240 522 aa14.31□□□□□ -0.12
CSNK1E-202ENST00000366216 BCAR3O75815 825 aa14.31□□□□□ -0.12
CSNK1E-202ENST00000366216 KIF6Q6ZMV9 814 aa14.31□□□□□ -0.12
CSNK1E-202ENST00000366216 SAMD7Q7Z3H4 446 aa14.31□□□□□ -0.12
CSNK1E-202ENST00000366216 RTF1Q92541 710 aaKnown RBP14.31□□□□□ -0.12
CSNK1E-202ENST00000366216 ZBTB12Q9Y330 459 aaPredicted RBP14.31□□□□□ -0.12
CSNK1E-202ENST00000366216 LAMB1P07942 1786 aa14.3□□□□□ -0.12
CSNK1E-202ENST00000366216 ADM5C9JUS6 153 aa14.3□□□□□ -0.12
CSNK1E-202ENST00000366216 PDE3AQ14432 1141 aa14.3□□□□□ -0.12
CSNK1E-202ENST00000366216 MPNDQ8N594 471 aa14.3□□□□□ -0.12
CSNK1E-202ENST00000366216 DPF2Q92785 391 aa14.3□□□□□ -0.12
CSNK1E-202ENST00000366216 DCPSQ96C86 337 aaKnown RBP14.3□□□□□ -0.12
CSNK1E-202ENST00000366216 NLRP3Q96P20 1036 aa14.3□□□□□ -0.12
CSNK1E-202ENST00000366216 MBIPQ9NS73 344 aa14.3□□□□□ -0.12
CSNK1E-202ENST00000366216 HDAC9Q9UKV0 1011 aa14.3□□□□□ -0.12
CSNK1E-202ENST00000366216 CHL1O00533 1208 aa14.29□□□□□ -0.12
CSNK1E-202ENST00000366216 MYL6BP14649 208 aa14.29□□□□□ -0.12
CSNK1E-202ENST00000366216 TAF7Q15545 349 aaPredicted RBP14.29□□□□□ -0.12
CSNK1E-202ENST00000366216 ALDH1L2Q3SY69 923 aa14.29□□□□□ -0.12
CSNK1E-202ENST00000366216 TBC1D10BQ4KMP7 808 aaPredicted RBP14.29□□□□□ -0.12
CSNK1E-202ENST00000366216 SLC10A5Q5PT55 438 aa14.29□□□□□ -0.12
CSNK1E-202ENST00000366216 SP8Q8IXZ3 490 aa14.29□□□□□ -0.12
CSNK1E-202ENST00000366216 KCNQ5Q9NR82 932 aa14.29□□□□□ -0.12
CSNK1E-202ENST00000366216 LAS1LQ9Y4W2 734 aaKnown RBP14.29□□□□□ -0.12
CSNK1E-202ENST00000366216 ASTN2O75129 1339 aaPredicted RBP14.28□□□□□ -0.12
CSNK1E-202ENST00000366216 BBOX1O75936 387 aa14.28□□□□□ -0.12
CSNK1E-202ENST00000366216 EIF4A1P60842 406 aaKnown RBP14.28□□□□□ -0.12
CSNK1E-202ENST00000366216 GIGYF2Q6Y7W6 1299 aaKnown RBP14.28□□□□□ -0.12
CSNK1E-202ENST00000366216 PPP1R42Q7Z4L9 355 aa14.28□□□□□ -0.12
CSNK1E-202ENST00000366216 RASAL3Q86YV0 1011 aa14.28□□□□□ -0.12
CSNK1E-202ENST00000366216 EXOC6Q8TAG9 804 aa14.28□□□□□ -0.12
CSNK1E-202ENST00000366216 ZNF296Q8WUU4 475 aaPredicted RBP14.28□□□□□ -0.12
CSNK1E-202ENST00000366216 TRIOBPQ9H2D6 2365 aa14.28□□□□□ -0.12
CSNK1E-202ENST00000366216 PDIA6Q15084 440 aa14.27□□□□□ -0.13
CSNK1E-202ENST00000366216 PROSER3Q2NL68 480 aa14.27□□□□□ -0.13
CSNK1E-202ENST00000366216 BABAM1Q9NWV8 329 aa14.27□□□□□ -0.13
CSNK1E-202ENST00000366216 BRCA2P51587 3418 aa14.26□□□□□ -0.13
CSNK1E-202ENST00000366216 PSMD14O00487 310 aa14.26□□□□□ -0.13
CSNK1E-202ENST00000366216 ANXA1P04083 346 aa14.26□□□□□ -0.13
CSNK1E-202ENST00000366216 HCLS1P14317 486 aaPredicted RBP14.26□□□□□ -0.13
CSNK1E-202ENST00000366216 C20orf194Q5TEA3 1177 aa14.26□□□□□ -0.13
CSNK1E-202ENST00000366216 FBXO46Q6PJ61 603 aaPredicted RBP14.26□□□□□ -0.13
CSNK1E-202ENST00000366216 CRBNQ96SW2 442 aa14.26□□□□□ -0.13
CSNK1E-202ENST00000366216 RTL9Q8NET4 1388 aa14.25□□□□□ -0.13
CSNK1E-202ENST00000366216 SZT2Q5T011 3432 aa14.25□□□□□ -0.13
CSNK1E-202ENST00000366216 VAMP4O75379 141 aa14.25□□□□□ -0.13
CSNK1E-202ENST00000366216 TBC1D8O95759 1140 aa14.25□□□□□ -0.13
CSNK1E-202ENST00000366216 RPS12P25398 132 aaKnown RBP14.25□□□□□ -0.13
CSNK1E-202ENST00000366216 FXR1P51114 621 aaKnown RBP eCLIP14.25□□□□□ -0.13
CSNK1E-202ENST00000366216 RBM26Q5T8P6 1007 aaKnown RBP14.25□□□□□ -0.13
CSNK1E-202ENST00000366216 SULF1Q8IWU6 871 aa14.25□□□□□ -0.13
CSNK1E-202ENST00000366216 CDCA5Q96FF9 252 aa14.25□□□□□ -0.13
CSNK1E-202ENST00000366216 MS4A1P11836 297 aa14.24□□□□□ -0.13
CSNK1E-202ENST00000366216 PARP10Q53GL7 1025 aa14.24□□□□□ -0.13
CSNK1E-202ENST00000366216 B4GALNT3Q6L9W6 998 aa14.24□□□□□ -0.13
CSNK1E-202ENST00000366216 SSH1Q8WYL5 1049 aa14.24□□□□□ -0.13
CSNK1E-202ENST00000366216 UTP14AQ9BVJ6 771 aaKnown RBP14.24□□□□□ -0.13
CSNK1E-202ENST00000366216 SMC4Q9NTJ3 1288 aa14.24□□□□□ -0.13
CSNK1E-202ENST00000366216 GGA3Q9NZ52 723 aa14.24□□□□□ -0.13
CSNK1E-202ENST00000366216 KIF4BQ2VIQ3 1234 aa14.23□□□□□ -0.13
CSNK1E-202ENST00000366216 TWISTNBQ3B726 338 aaPredicted RBP14.23□□□□□ -0.13
CSNK1E-202ENST00000366216 NOM1Q5C9Z4 860 aaKnown RBP14.23□□□□□ -0.13
CSNK1E-202ENST00000366216 CCDC136Q96JN2 1154 aa14.23□□□□□ -0.13
CSNK1E-202ENST00000366216 DBNDD1Q9H9R9 158 aa14.23□□□□□ -0.13
CSNK1E-202ENST00000366216 ZNF646O15015 1829 aaPredicted RBP14.22□□□□□ -0.13
CSNK1E-202ENST00000366216 KIF16BQ96L93 1317 aa14.22□□□□□ -0.13
CSNK1E-202ENST00000366216 GPR25O00155 361 aa14.22□□□□□ -0.13
CSNK1E-202ENST00000366216 FKBP1BP68106 108 aa14.22□□□□□ -0.13
CSNK1E-202ENST00000366216 AAMPQ13685 434 aa14.22□□□□□ -0.13
CSNK1E-202ENST00000366216 WASHC4Q2M389 1173 aa14.22□□□□□ -0.13
CSNK1E-202ENST00000366216 ZKSCAN2Q63HK3 967 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms