RNA–Protein interactions for RNA: ENST00000363858.1

RNU6-271P-201, Transcript of RNA, U6 small nuclear 271, pseudogene, humanhuman

BASIC

Gene RNU6-271P, Length 105 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-271P-201ENST00000363858 SIK1P57059 783 aa3.68□□□□□ -1.82
RNU6-271P-201ENST00000363858 NEUROD1Q13562 356 aa3.68□□□□□ -1.82
RNU6-271P-201ENST00000363858 USPL1Q5W0Q7 1092 aa3.68□□□□□ -1.82
RNU6-271P-201ENST00000363858 PDE12Q6L8Q7 609 aaKnown RBP3.68□□□□□ -1.82
RNU6-271P-201ENST00000363858 ALKBH2Q6NS38 261 aa3.68□□□□□ -1.82
RNU6-271P-201ENST00000363858 KANK3Q6NY19 840 aa3.68□□□□□ -1.82
RNU6-271P-201ENST00000363858 SCARF2Q96GP6 870 aaPredicted RBP3.68□□□□□ -1.82
RNU6-271P-201ENST00000363858 ABI2Q9NYB9 513 aaPredicted RBP3.68□□□□□ -1.82
RNU6-271P-201ENST00000363858 SALL4Q9UJQ4 1053 aa3.68□□□□□ -1.82
RNU6-271P-201ENST00000363858 MKL2Q9ULH7 1088 aa3.68□□□□□ -1.82
RNU6-271P-201ENST00000363858 TRPA1O75762 1119 aa3.67□□□□□ -1.82
RNU6-271P-201ENST00000363858 EIF2AK2P19525 551 aaKnown RBP3.67□□□□□ -1.82
RNU6-271P-201ENST00000363858 ALAS2P22557 587 aa3.67□□□□□ -1.82
RNU6-271P-201ENST00000363858 KCNA1Q09470 495 aa3.67□□□□□ -1.82
RNU6-271P-201ENST00000363858 C8orf34Q49A92 452 aa3.67□□□□□ -1.82
RNU6-271P-201ENST00000363858 ZNF438Q7Z4V0 828 aa3.67□□□□□ -1.82
RNU6-271P-201ENST00000363858 BEND7Q8N7W2 519 aaPredicted RBP3.67□□□□□ -1.82
RNU6-271P-201ENST00000363858 CEP120Q8N960 986 aa3.67□□□□□ -1.82
RNU6-271P-201ENST00000363858 CCER1Q8TC90 406 aaPredicted RBP3.67□□□□□ -1.82
RNU6-271P-201ENST00000363858 PLD4Q96BZ4 506 aa3.67□□□□□ -1.82
RNU6-271P-201ENST00000363858 PLVAPQ9BX97 442 aa3.67□□□□□ -1.82
RNU6-271P-201ENST00000363858 SMG9Q9H0W8 520 aaKnown RBP3.67□□□□□ -1.82
RNU6-271P-201ENST00000363858 RASSF4Q9H2L5 321 aa3.67□□□□□ -1.82
RNU6-271P-201ENST00000363858 JPH1Q9HDC5 661 aaPredicted RBP3.67□□□□□ -1.82
RNU6-271P-201ENST00000363858 LATS2Q9NRM7 1088 aa3.67□□□□□ -1.82
RNU6-271P-201ENST00000363858 FAM13BQ9NYF5 915 aa3.67□□□□□ -1.82
RNU6-271P-201ENST00000363858 FRRS1LQ9P0K9 344 aa3.67□□□□□ -1.82
RNU6-271P-201ENST00000363858 TRIM33Q9UPN9 1127 aa3.67□□□□□ -1.82
RNU6-271P-201ENST00000363858 MTMR7Q9Y216 660 aa3.67□□□□□ -1.82
RNU6-271P-201ENST00000363858 DEAF1O75398 565 aaPredicted RBP3.66□□□□□ -1.82
RNU6-271P-201ENST00000363858 GDF11O95390 407 aa3.66□□□□□ -1.82
RNU6-271P-201ENST00000363858 PSAPP07602 524 aa3.66□□□□□ -1.82
RNU6-271P-201ENST00000363858 CHRNA4P43681 627 aa3.66□□□□□ -1.82
RNU6-271P-201ENST00000363858 PDE4CQ08493 712 aa3.66□□□□□ -1.82
RNU6-271P-201ENST00000363858 ORC1Q13415 861 aa3.66□□□□□ -1.82
RNU6-271P-201ENST00000363858 PEAR1Q5VY43 1037 aaPredicted RBP3.66□□□□□ -1.82
RNU6-271P-201ENST00000363858 KCTD17Q8N5Z5 321 aa3.66□□□□□ -1.82
RNU6-271P-201ENST00000363858 TTC9Q92623 222 aa3.66□□□□□ -1.82
RNU6-271P-201ENST00000363858 FNDC3AQ9Y2H6 1198 aaKnown RBP3.66□□□□□ -1.82
RNU6-271P-201ENST00000363858 A0A0A0MRY4 1105 aa3.65□□□□□ -1.83
RNU6-271P-201ENST00000363858 PHF20L1A8MW92 1017 aa3.65□□□□□ -1.83
RNU6-271P-201ENST00000363858 LILRB5O75023 590 aa3.65□□□□□ -1.83
RNU6-271P-201ENST00000363858 PROCP04070 461 aa3.65□□□□□ -1.83
RNU6-271P-201ENST00000363858 POLR3DP05423 398 aaPredicted RBP3.65□□□□□ -1.83
RNU6-271P-201ENST00000363858 HYAL2Q12891 473 aa3.65□□□□□ -1.83
RNU6-271P-201ENST00000363858 DSC3Q14574 896 aa3.65□□□□□ -1.83
RNU6-271P-201ENST00000363858 PLA2G4EQ3MJ16 856 aa3.65□□□□□ -1.83
RNU6-271P-201ENST00000363858 TTC39BQ5VTQ0 682 aaPredicted RBP3.65□□□□□ -1.83
RNU6-271P-201ENST00000363858 ELMSAN1Q6PJG2 1045 aa3.65□□□□□ -1.83
RNU6-271P-201ENST00000363858 TMC7Q7Z402 723 aa3.65□□□□□ -1.83
RNU6-271P-201ENST00000363858 PODNQ7Z5L7 613 aa3.65□□□□□ -1.83
RNU6-271P-201ENST00000363858 TMEM151AQ8N4L1 468 aa3.65□□□□□ -1.83
RNU6-271P-201ENST00000363858 SNX29Q8TEQ0 813 aa3.65□□□□□ -1.83
RNU6-271P-201ENST00000363858 ZKSCAN3Q9BRR0 538 aa3.65□□□□□ -1.83
RNU6-271P-201ENST00000363858 RBCK1Q9BYM8 510 aa3.65□□□□□ -1.83
RNU6-271P-201ENST00000363858 ZFYVE28Q9HCC9 887 aa3.65□□□□□ -1.83
RNU6-271P-201ENST00000363858 RNF225M0QZC1 329 aaPredicted RBP3.64□□□□□ -1.83
RNU6-271P-201ENST00000363858 RGS9O75916 674 aaPredicted RBP3.64□□□□□ -1.83
RNU6-271P-201ENST00000363858 AAMPQ13685 434 aa3.64□□□□□ -1.83
RNU6-271P-201ENST00000363858 HGSNATQ68CP4 663 aa3.64□□□□□ -1.83
RNU6-271P-201ENST00000363858 MSL1Q68DK7 614 aa3.64□□□□□ -1.83
RNU6-271P-201ENST00000363858 CD163Q86VB7 1156 aa3.64□□□□□ -1.83
RNU6-271P-201ENST00000363858 DMRTC2Q8IXT2 367 aaPredicted RBP3.64□□□□□ -1.83
RNU6-271P-201ENST00000363858 SETDB2Q96T68 719 aa3.64□□□□□ -1.83
RNU6-271P-201ENST00000363858 POP1Q99575 1024 aaKnown RBP3.64□□□□□ -1.83
RNU6-271P-201ENST00000363858 PBX4Q9BYU1 374 aa3.64□□□□□ -1.83
RNU6-271P-201ENST00000363858 DZANK1Q9NVP4 752 aa3.64□□□□□ -1.83
RNU6-271P-201ENST00000363858 BRPF3Q9ULD4 1205 aa3.64□□□□□ -1.83
RNU6-271P-201ENST00000363858 METTL12A8MUP2 240 aa3.63□□□□□ -1.83
RNU6-271P-201ENST00000363858 C1QTNF9BB2RNN3 333 aa3.63□□□□□ -1.83
RNU6-271P-201ENST00000363858 NDUFB5O43674 189 aa3.63□□□□□ -1.83
RNU6-271P-201ENST00000363858 PHACTR2O75167 634 aa3.63□□□□□ -1.83
RNU6-271P-201ENST00000363858 RPLP1P05386 114 aaKnown RBP3.63□□□□□ -1.83
RNU6-271P-201ENST00000363858 SELPP16109 830 aa3.63□□□□□ -1.83
RNU6-271P-201ENST00000363858 EPHA1P21709 976 aa3.63□□□□□ -1.83
RNU6-271P-201ENST00000363858 CES1P23141 567 aa3.63□□□□□ -1.83
RNU6-271P-201ENST00000363858 USP5P45974 858 aa3.63□□□□□ -1.83
RNU6-271P-201ENST00000363858 SETDB1Q15047 1291 aa3.63□□□□□ -1.83
RNU6-271P-201ENST00000363858 GRIK4Q16099 956 aa3.63□□□□□ -1.83
RNU6-271P-201ENST00000363858 PCSK7Q16549 785 aa3.63□□□□□ -1.83
RNU6-271P-201ENST00000363858 GDF6Q6KF10 455 aaPredicted RBP3.63□□□□□ -1.83
RNU6-271P-201ENST00000363858 SHISA2Q6UWI4 295 aa3.63□□□□□ -1.83
RNU6-271P-201ENST00000363858 PI16Q6UXB8 463 aa3.63□□□□□ -1.83
RNU6-271P-201ENST00000363858 GALNT12Q8IXK2 581 aa3.63□□□□□ -1.83
RNU6-271P-201ENST00000363858 FMR1NBQ8N0W7 255 aaPredicted RBP3.63□□□□□ -1.83
RNU6-271P-201ENST00000363858 GALNT11Q8NCW6 608 aa3.63□□□□□ -1.83
RNU6-271P-201ENST00000363858 ALKBH8Q96BT7 664 aaKnown RBP3.63□□□□□ -1.83
RNU6-271P-201ENST00000363858 NIF3L1Q9GZT8 377 aa3.63□□□□□ -1.83
RNU6-271P-201ENST00000363858 ADAM19Q9H013 955 aa3.63□□□□□ -1.83
RNU6-271P-201ENST00000363858 SH2B1Q9NRF2 756 aaPredicted RBP3.63□□□□□ -1.83
RNU6-271P-201ENST00000363858 DCTN4Q9UJW0 460 aa3.63□□□□□ -1.83
RNU6-271P-201ENST00000363858 A0A1W2PP55 124 aa3.62□□□□□ -1.83
RNU6-271P-201ENST00000363858 EIF1AYO14602 144 aaKnown RBP3.62□□□□□ -1.83
RNU6-271P-201ENST00000363858 TREHO43280 583 aa3.62□□□□□ -1.83
RNU6-271P-201ENST00000363858 GHRHP01286 108 aa3.62□□□□□ -1.83
RNU6-271P-201ENST00000363858 PDIA4P13667 645 aaKnown RBP3.62□□□□□ -1.83
RNU6-271P-201ENST00000363858 PCSK2P16519 638 aa3.62□□□□□ -1.83
RNU6-271P-201ENST00000363858 EHHADHQ08426 723 aa3.62□□□□□ -1.83
RNU6-271P-201ENST00000363858 CEP135Q66GS9 1140 aa3.62□□□□□ -1.83
RNU6-271P-201ENST00000363858 TXNDC11Q6PKC3 985 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms