RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 TBC1D32Q96NH3 1257 aa21.39■■□□□ 1.02
CLIP2-202ENST00000361545 PRC1O43663 620 aa21.39■■□□□ 1.01
CLIP2-202ENST00000361545 SYCP3Q8IZU3 236 aa21.39■■□□□ 1.01
CLIP2-202ENST00000361545 RBM17Q96I25 401 aaKnown RBP21.39■■□□□ 1.01
CLIP2-202ENST00000361545 DDX19AQ9NUU7 478 aaKnown RBP21.39■■□□□ 1.01
CLIP2-202ENST00000361545 ANKRD62A6NC57 917 aa21.38■■□□□ 1.01
CLIP2-202ENST00000361545 SEPT7Q16181 437 aaKnown RBP21.38■■□□□ 1.01
CLIP2-202ENST00000361545 CCDC40Q4G0X9 1142 aa21.38■■□□□ 1.01
CLIP2-202ENST00000361545 EDC4Q6P2E9 1401 aaKnown RBP21.38■■□□□ 1.01
CLIP2-202ENST00000361545 RBM25P49756 843 aaKnown RBP21.38■■□□□ 1.01
CLIP2-202ENST00000361545 TDRD12Q587J7 1177 aaKnown RBP21.38■■□□□ 1.01
CLIP2-202ENST00000361545 CCDC24Q8N4L8 307 aa21.38■■□□□ 1.01
CLIP2-202ENST00000361545 NUP88Q99567 741 aaPredicted RBP21.38■■□□□ 1.01
CLIP2-202ENST00000361545 PZPP20742 1482 aa21.38■■□□□ 1.01
CLIP2-202ENST00000361545 PLS1Q14651 629 aa21.38■■□□□ 1.01
CLIP2-202ENST00000361545 CEP170Q5SW79 1584 aa21.38■■□□□ 1.01
CLIP2-202ENST00000361545 JAKMIP3Q5VZ66 844 aa21.38■■□□□ 1.01
CLIP2-202ENST00000361545 PLBD2Q8NHP8 589 aa21.38■■□□□ 1.01
CLIP2-202ENST00000361545 USP21Q9UK80 565 aa21.38■■□□□ 1.01
CLIP2-202ENST00000361545 VPS36Q86VN1 386 aa21.37■■□□□ 1.01
CLIP2-202ENST00000361545 CCDC150Q8NCX0 1101 aa21.37■■□□□ 1.01
CLIP2-202ENST00000361545 DNAI2Q9GZS0 605 aa21.37■■□□□ 1.01
CLIP2-202ENST00000361545 LTKP29376 864 aa21.37■■□□□ 1.01
CLIP2-202ENST00000361545 DNA2P51530 1060 aa21.37■■□□□ 1.01
CLIP2-202ENST00000361545 TTC41PQ6P2S7 1318 aa21.37■■□□□ 1.01
CLIP2-202ENST00000361545 ITGA6P23229 1130 aa21.37■■□□□ 1.01
CLIP2-202ENST00000361545 USP8P40818 1118 aa21.37■■□□□ 1.01
CLIP2-202ENST00000361545 NAPAP54920 295 aa21.37■■□□□ 1.01
CLIP2-202ENST00000361545 MPHOSPH6Q99547 160 aaKnown RBP21.37■■□□□ 1.01
CLIP2-202ENST00000361545 DCTPP1Q9H773 170 aa21.37■■□□□ 1.01
CLIP2-202ENST00000361545 SH3TC1Q8TE82 1336 aa21.37■■□□□ 1.01
CLIP2-202ENST00000361545 PIK3C2GO75747 1445 aa21.37■■□□□ 1.01
CLIP2-202ENST00000361545 NF2P35240 595 aa21.36■■□□□ 1.01
CLIP2-202ENST00000361545 MAST1Q9Y2H9 1570 aa21.36■■□□□ 1.01
CLIP2-202ENST00000361545 UFL1O94874 794 aa21.36■■□□□ 1.01
CLIP2-202ENST00000361545 FAM193AP78312 1265 aa21.36■■□□□ 1.01
CLIP2-202ENST00000361545 CCDC102BQ68D86 513 aa21.36■■□□□ 1.01
CLIP2-202ENST00000361545 PLCG2P16885 1265 aa21.36■■□□□ 1.01
CLIP2-202ENST00000361545 TIMM10P62072 90 aa21.36■■□□□ 1.01
CLIP2-202ENST00000361545 GNAQP50148 359 aa21.36■■□□□ 1.01
CLIP2-202ENST00000361545 CCDC148Q8NFR7 591 aa21.36■■□□□ 1.01
CLIP2-202ENST00000361545 SLC52A2Q9HAB3 445 aa21.36■■□□□ 1.01
CLIP2-202ENST00000361545 TMEM87AQ8NBN3 555 aa21.35■■□□□ 1.01
CLIP2-202ENST00000361545 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.35■■□□□ 1.01
CLIP2-202ENST00000361545 GJA3Q9Y6H8 435 aa21.35■■□□□ 1.01
CLIP2-202ENST00000361545 PER1O15534 1290 aaPredicted RBP21.35■■□□□ 1.01
CLIP2-202ENST00000361545 IQCEQ6IPM2 695 aa21.35■■□□□ 1.01
CLIP2-202ENST00000361545 SOS1Q07889 1333 aaPredicted RBP21.35■■□□□ 1.01
CLIP2-202ENST00000361545 TMEM2Q9UHN6 1383 aa21.35■■□□□ 1.01
CLIP2-202ENST00000361545 COL17A1Q9UMD9 1497 aaPredicted RBP21.35■■□□□ 1.01
CLIP2-202ENST00000361545 GNAT2P19087 354 aa21.35■■□□□ 1.01
CLIP2-202ENST00000361545 SMARCC2Q8TAQ2 1214 aa21.35■■□□□ 1.01
CLIP2-202ENST00000361545 KLHDC4Q8TBB5 520 aa21.35■■□□□ 1.01
CLIP2-202ENST00000361545 PPP4R3BQ5MIZ7 849 aa21.35■■□□□ 1.01
CLIP2-202ENST00000361545 CLIP2Q9UDT6 1046 aa21.35■■□□□ 1.01
CLIP2-202ENST00000361545 CETN2P41208 172 aa21.34■■□□□ 1.01
CLIP2-202ENST00000361545 RBM10P98175 930 aaKnown RBP21.34■■□□□ 1.01
CLIP2-202ENST00000361545 TAX1BP1Q86VP1 789 aa21.34■■□□□ 1.01
CLIP2-202ENST00000361545 CFAP43Q8NDM7 1665 aa21.34■■□□□ 1.01
CLIP2-202ENST00000361545 TBCAO75347 108 aaKnown RBP21.34■■□□□ 1.01
CLIP2-202ENST00000361545 DNAJC10Q8IXB1 793 aa21.34■■□□□ 1.01
CLIP2-202ENST00000361545 CETN1Q12798 172 aa21.34■■□□□ 1.01
CLIP2-202ENST00000361545 PARP10Q53GL7 1025 aa21.34■■□□□ 1.01
CLIP2-202ENST00000361545 METTL22Q9BUU2 404 aaPredicted RBP21.34■■□□□ 1.01
CLIP2-202ENST00000361545 USP25Q9UHP3 1055 aa21.34■■□□□ 1.01
CLIP2-202ENST00000361545 ERLIN1O75477 346 aa21.34■■□□□ 1.01
CLIP2-202ENST00000361545 ZSCAN16Q9H4T2 348 aaPredicted RBP21.34■■□□□ 1.01
CLIP2-202ENST00000361545 BICD1Q96G01 975 aa21.33■■□□□ 1.01
CLIP2-202ENST00000361545 ZBTB40Q9NUA8 1239 aa21.33■■□□□ 1.01
CLIP2-202ENST00000361545 DNMT1P26358 1616 aaKnown RBP21.33■■□□□ 1.01
CLIP2-202ENST00000361545 ARHGEF12Q9NZN5 1544 aa21.33■■□□□ 1.01
CLIP2-202ENST00000361545 STXBP4Q6ZWJ1 553 aa21.33■■□□□ 1.01
CLIP2-202ENST00000361545 AFMP43652 599 aa21.33■■□□□ 1
CLIP2-202ENST00000361545 ERMNQ8TAM6 284 aa21.33■■□□□ 1
CLIP2-202ENST00000361545 ZNF594Q96JF6 807 aaPredicted RBP21.33■■□□□ 1
CLIP2-202ENST00000361545 MAP7D2Q96T17 732 aa21.33■■□□□ 1
CLIP2-202ENST00000361545 ZSCAN22P10073 491 aaPredicted RBP21.32■■□□□ 1
CLIP2-202ENST00000361545 ARHGEF10O15013 1369 aa21.32■■□□□ 1
CLIP2-202ENST00000361545 TRAF1Q13077 416 aa21.32■■□□□ 1
CLIP2-202ENST00000361545 MMRN2Q9H8L6 949 aa21.32■■□□□ 1
CLIP2-202ENST00000361545 CCDC87Q9NVE4 849 aa21.32■■□□□ 1
CLIP2-202ENST00000361545 A0A1B0GUL7 405 aa21.32■■□□□ 1
CLIP2-202ENST00000361545 MACROD2A1Z1Q3 448 aa21.32■■□□□ 1
CLIP2-202ENST00000361545 EYA2O00167 538 aa21.31■■□□□ 1
CLIP2-202ENST00000361545 MBD4O95243 580 aa21.31■■□□□ 1
CLIP2-202ENST00000361545 RXRAP19793 462 aa21.31■■□□□ 1
CLIP2-202ENST00000361545 SAP30BPQ9UHR5 308 aaKnown RBP21.31■■□□□ 1
CLIP2-202ENST00000361545 PBRM1Q86U86 1689 aa21.31■■□□□ 1
CLIP2-202ENST00000361545 TNNT1P13805 278 aa21.31■■□□□ 1
CLIP2-202ENST00000361545 SYKP43405 635 aa21.31■■□□□ 1
CLIP2-202ENST00000361545 STX1AQ16623 288 aa21.31■■□□□ 1
CLIP2-202ENST00000361545 VTI1AQ96AJ9 217 aa21.31■■□□□ 1
CLIP2-202ENST00000361545 RBM27Q9P2N5 1060 aaKnown RBP21.31■■□□□ 1
CLIP2-202ENST00000361545 H0YHG0 523 aa21.31■■□□□ 1
CLIP2-202ENST00000361545 PYM1Q9BRP8 204 aaKnown RBP21.31■■□□□ 1
CLIP2-202ENST00000361545 SPDYE4A6NLX3 237 aa21.3■■□□□ 1
CLIP2-202ENST00000361545 MARCKSP29966 332 aaPredicted RBP21.3■■□□□ 1
CLIP2-202ENST00000361545 LMOD1P29536 600 aaPredicted RBP21.3■■□□□ 1
CLIP2-202ENST00000361545 APOBRQ0VD83 1088 aa21.3■■□□□ 1
CLIP2-202ENST00000361545 EXOC1Q9NV70 894 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms