RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 URI1O94763 535 aaPredicted RBP23.27■■□□□ 1.32
CDC42BPB-201ENST00000361246 TFCP2Q12800 502 aa23.27■■□□□ 1.32
CDC42BPB-201ENST00000361246 RHPN1Q8TCX5 695 aa23.27■■□□□ 1.32
CDC42BPB-201ENST00000361246 USP21Q9UK80 565 aa23.27■■□□□ 1.32
CDC42BPB-201ENST00000361246 NCOA1Q15788 1441 aa23.27■■□□□ 1.31
CDC42BPB-201ENST00000361246 UQCRHLA0A096LP55 91 aa23.26■■□□□ 1.31
CDC42BPB-201ENST00000361246 UQCRHP07919 91 aa23.26■■□□□ 1.31
CDC42BPB-201ENST00000361246 Q6ZUG5 572 aa23.26■■□□□ 1.31
CDC42BPB-201ENST00000361246 CNBD1Q8NA66 436 aa23.26■■□□□ 1.31
CDC42BPB-201ENST00000361246 ERLIN1O75477 346 aa23.26■■□□□ 1.31
CDC42BPB-201ENST00000361246 TNNI2P48788 182 aa23.26■■□□□ 1.31
CDC42BPB-201ENST00000361246 PUS7Q96PZ0 661 aaKnown RBP23.26■■□□□ 1.31
CDC42BPB-201ENST00000361246 SH2B1Q9NRF2 756 aaPredicted RBP23.26■■□□□ 1.31
CDC42BPB-201ENST00000361246 HOMER2Q9NSB8 354 aa23.26■■□□□ 1.31
CDC42BPB-201ENST00000361246 UHRF1BP1LA0JNW5 1464 aa23.26■■□□□ 1.31
CDC42BPB-201ENST00000361246 TRIM47Q96LD4 638 aa23.26■■□□□ 1.31
CDC42BPB-201ENST00000361246 STX6O43752 255 aa23.25■■□□□ 1.31
CDC42BPB-201ENST00000361246 FAM89AQ96GI7 184 aa23.25■■□□□ 1.31
CDC42BPB-201ENST00000361246 SCAF11Q99590 1463 aaKnown RBP23.25■■□□□ 1.31
CDC42BPB-201ENST00000361246 KIF5CO60282 957 aa23.25■■□□□ 1.31
CDC42BPB-201ENST00000361246 CCDC91Q7Z6B0 441 aa23.25■■□□□ 1.31
CDC42BPB-201ENST00000361246 SORBS3O60504 671 aa23.25■■□□□ 1.31
CDC42BPB-201ENST00000361246 SPDYE3A6NKU9 549 aa23.25■■□□□ 1.31
CDC42BPB-201ENST00000361246 BACH1O14867 736 aa23.25■■□□□ 1.31
CDC42BPB-201ENST00000361246 STXBP4Q6ZWJ1 553 aa23.25■■□□□ 1.31
CDC42BPB-201ENST00000361246 ESR2Q92731 530 aa23.25■■□□□ 1.31
CDC42BPB-201ENST00000361246 PICK1Q9NRD5 415 aa23.25■■□□□ 1.31
CDC42BPB-201ENST00000361246 DHX29Q7Z478 1369 aaKnown RBP23.25■■□□□ 1.31
CDC42BPB-201ENST00000361246 SFPQP23246 707 aaKnown RBP eCLIP23.25■■□□□ 1.31
CDC42BPB-201ENST00000361246 BEGAINQ9BUH8 593 aa23.25■■□□□ 1.31
CDC42BPB-201ENST00000361246 TTC21AQ8NDW8 1320 aa23.24■■□□□ 1.31
CDC42BPB-201ENST00000361246 KRT23Q9C075 422 aa23.24■■□□□ 1.31
CDC42BPB-201ENST00000361246 PABPN1LA6NDY0 278 aaKnown RBP23.24■■□□□ 1.31
CDC42BPB-201ENST00000361246 KCNA6P17658 529 aa23.24■■□□□ 1.31
CDC42BPB-201ENST00000361246 PAG1Q9NWQ8 432 aa23.24■■□□□ 1.31
CDC42BPB-201ENST00000361246 CHMP2AO43633 222 aa23.24■■□□□ 1.31
CDC42BPB-201ENST00000361246 CCDC183Q5T5S1 534 aa23.24■■□□□ 1.31
CDC42BPB-201ENST00000361246 RRAGBQ5VZM2 374 aa23.24■■□□□ 1.31
CDC42BPB-201ENST00000361246 MCM4P33991 863 aa23.23■■□□□ 1.31
CDC42BPB-201ENST00000361246 MCM7P33993 719 aa23.23■■□□□ 1.31
CDC42BPB-201ENST00000361246 FAM170AA1A519 330 aa23.23■■□□□ 1.31
CDC42BPB-201ENST00000361246 GCP02774 474 aa23.23■■□□□ 1.31
CDC42BPB-201ENST00000361246 HLTFQ14527 1009 aaKnown RBP eCLIP23.23■■□□□ 1.31
CDC42BPB-201ENST00000361246 NOD1Q9Y239 953 aa23.23■■□□□ 1.31
CDC42BPB-201ENST00000361246 ABCC11Q96J66 1382 aa23.22■■□□□ 1.31
CDC42BPB-201ENST00000361246 BICC1Q9H694 974 aaKnown RBP23.22■■□□□ 1.31
CDC42BPB-201ENST00000361246 YEATS4O95619 227 aa23.22■■□□□ 1.31
CDC42BPB-201ENST00000361246 C19orf44Q9H6X5 657 aa23.22■■□□□ 1.31
CDC42BPB-201ENST00000361246 DDX39AO00148 427 aaKnown RBP23.22■■□□□ 1.31
CDC42BPB-201ENST00000361246 MAEAQ7L5Y9 396 aa23.22■■□□□ 1.31
CDC42BPB-201ENST00000361246 ORAI2Q96SN7 254 aa23.22■■□□□ 1.31
CDC42BPB-201ENST00000361246 CSPG5O95196 566 aa23.22■■□□□ 1.31
CDC42BPB-201ENST00000361246 LRSAM1Q6UWE0 723 aa23.22■■□□□ 1.31
CDC42BPB-201ENST00000361246 TAF5LO75529 589 aa23.21■■□□□ 1.31
CDC42BPB-201ENST00000361246 IGHDP01880 384 aa23.21■■□□□ 1.31
CDC42BPB-201ENST00000361246 RRP36Q96EU6 259 aaKnown RBP23.21■■□□□ 1.31
CDC42BPB-201ENST00000361246 PRIM1P49642 420 aaKnown RBP23.21■■□□□ 1.31
CDC42BPB-201ENST00000361246 NMIQ13287 307 aaPredicted RBP23.21■■□□□ 1.31
CDC42BPB-201ENST00000361246 ABCA10Q8WWZ4 1543 aa23.21■■□□□ 1.31
CDC42BPB-201ENST00000361246 ERMNQ8TAM6 284 aa23.21■■□□□ 1.31
CDC42BPB-201ENST00000361246 ZSWIM4Q9H7M6 989 aa23.21■■□□□ 1.31
CDC42BPB-201ENST00000361246 EIF3JO75822 258 aaKnown RBP23.2■■□□□ 1.31
CDC42BPB-201ENST00000361246 BCS1LQ9Y276 419 aa23.2■■□□□ 1.31
CDC42BPB-201ENST00000361246 NCBP1Q09161 790 aaKnown RBP23.2■■□□□ 1.3
CDC42BPB-201ENST00000361246 LARGE2Q8N3Y3 721 aa23.2■■□□□ 1.3
CDC42BPB-201ENST00000361246 SCAND2PQ9GZW5 306 aaPredicted RBP23.2■■□□□ 1.3
CDC42BPB-201ENST00000361246 ZMYND15Q9H091 742 aa23.2■■□□□ 1.3
CDC42BPB-201ENST00000361246 PTGS1P23219 599 aa23.2■■□□□ 1.3
CDC42BPB-201ENST00000361246 ZNF594Q96JF6 807 aaPredicted RBP23.2■■□□□ 1.3
CDC42BPB-201ENST00000361246 URB2Q14146 1524 aaKnown RBP23.2■■□□□ 1.3
CDC42BPB-201ENST00000361246 USO1O60763 962 aaKnown RBP23.2■■□□□ 1.3
CDC42BPB-201ENST00000361246 MCMDC2Q4G0Z9 681 aa23.19■■□□□ 1.3
CDC42BPB-201ENST00000361246 FCHSD1Q86WN1 690 aa23.19■■□□□ 1.3
CDC42BPB-201ENST00000361246 RBM8AQ9Y5S9 174 aaKnown RBP23.19■■□□□ 1.3
CDC42BPB-201ENST00000361246 EYA3Q99504 573 aa23.19■■□□□ 1.3
CDC42BPB-201ENST00000361246 H0YIN7 160 aa23.19■■□□□ 1.3
CDC42BPB-201ENST00000361246 KSR2Q6VAB6 950 aa23.19■■□□□ 1.3
CDC42BPB-201ENST00000361246 TMOD4Q9NZQ9 345 aa23.19■■□□□ 1.3
CDC42BPB-201ENST00000361246 TTC22Q5TAA0 569 aa23.18■■□□□ 1.3
CDC42BPB-201ENST00000361246 MYCLP12524 364 aaPredicted RBP23.18■■□□□ 1.3
CDC42BPB-201ENST00000361246 IL27Q8NEV9 243 aa23.18■■□□□ 1.3
CDC42BPB-201ENST00000361246 USP25Q9UHP3 1055 aa23.18■■□□□ 1.3
CDC42BPB-201ENST00000361246 RNF216Q9NWF9 866 aaPredicted RBP23.18■■□□□ 1.3
CDC42BPB-201ENST00000361246 SSX2IPQ9Y2D8 614 aa23.18■■□□□ 1.3
CDC42BPB-201ENST00000361246 SYCP2Q9BX26 1530 aa23.18■■□□□ 1.3
CDC42BPB-201ENST00000361246 TBC1D5Q92609 795 aa23.18■■□□□ 1.3
CDC42BPB-201ENST00000361246 DHX58Q96C10 678 aa23.18■■□□□ 1.3
CDC42BPB-201ENST00000361246 C6orf50Q9HD87 102 aa23.18■■□□□ 1.3
CDC42BPB-201ENST00000361246 CRACR2AQ9BSW2 395 aa23.17■■□□□ 1.3
CDC42BPB-201ENST00000361246 PTPN14Q15678 1187 aa23.17■■□□□ 1.3
CDC42BPB-201ENST00000361246 CALRP27797 417 aaKnown RBP23.17■■□□□ 1.3
CDC42BPB-201ENST00000361246 ASIC1P78348 528 aa23.17■■□□□ 1.3
CDC42BPB-201ENST00000361246 PCDH11XQ9BZA7 1347 aa23.17■■□□□ 1.3
CDC42BPB-201ENST00000361246 PCDH11YQ9BZA8 1340 aa23.17■■□□□ 1.3
CDC42BPB-201ENST00000361246 FAM13AO94988 1023 aa23.17■■□□□ 1.3
CDC42BPB-201ENST00000361246 JADE2Q9NQC1 790 aa23.17■■□□□ 1.3
CDC42BPB-201ENST00000361246 TEX14Q8IWB6 1497 aa23.16■■□□□ 1.3
CDC42BPB-201ENST00000361246 EEF2P13639 858 aaKnown RBP23.16■■□□□ 1.3
CDC42BPB-201ENST00000361246 APOBRQ0VD83 1088 aa23.16■■□□□ 1.3
CDC42BPB-201ENST00000361246 NPATQ14207 1427 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms