RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 HDAC1Q13547 482 aaPredicted RBP13.95□□□□□ -0.18
CCDC144A-204ENST00000360524 COPS6Q7L5N1 327 aa13.95□□□□□ -0.18
CCDC144A-204ENST00000360524 CEP63Q96MT8 703 aa13.95□□□□□ -0.18
CCDC144A-204ENST00000360524 NUP160Q12769 1436 aa13.94□□□□□ -0.18
CCDC144A-204ENST00000360524 RRAGBQ5VZM2 374 aa13.94□□□□□ -0.18
CCDC144A-204ENST00000360524 HOOK3Q86VS8 718 aa13.94□□□□□ -0.18
CCDC144A-204ENST00000360524 C16orf71Q8IYS4 520 aaPredicted RBP13.94□□□□□ -0.18
CCDC144A-204ENST00000360524 BRF1Q92994 677 aa13.94□□□□□ -0.18
CCDC144A-204ENST00000360524 KRT23Q9C075 422 aa13.94□□□□□ -0.18
CCDC144A-204ENST00000360524 PUF60Q9UHX1 559 aaKnown RBP13.94□□□□□ -0.18
CCDC144A-204ENST00000360524 CAPN2P17655 700 aa13.94□□□□□ -0.18
CCDC144A-204ENST00000360524 CCDC102BQ68D86 513 aa13.94□□□□□ -0.18
CCDC144A-204ENST00000360524 SETDB2Q96T68 719 aa13.94□□□□□ -0.18
CCDC144A-204ENST00000360524 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.94□□□□□ -0.18
CCDC144A-204ENST00000360524 V9GYY5 206 aaPredicted RBP13.94□□□□□ -0.18
CCDC144A-204ENST00000360524 GOLGA6L9A6NEM1 432 aa13.94□□□□□ -0.18
CCDC144A-204ENST00000360524 TERF1P54274 439 aa13.94□□□□□ -0.18
CCDC144A-204ENST00000360524 ACSBG1Q96GR2 724 aa13.94□□□□□ -0.18
CCDC144A-204ENST00000360524 NAA15Q9BXJ9 866 aaKnown RBP13.94□□□□□ -0.18
CCDC144A-204ENST00000360524 SERPINA10Q9UK55 444 aa13.94□□□□□ -0.18
CCDC144A-204ENST00000360524 TRIM47Q96LD4 638 aa13.94□□□□□ -0.18
CCDC144A-204ENST00000360524 MEIS3Q99687 375 aa13.94□□□□□ -0.18
CCDC144A-204ENST00000360524 KLF18A0A0U1RQI7 1052 aa13.93□□□□□ -0.18
CCDC144A-204ENST00000360524 SYKP43405 635 aa13.93□□□□□ -0.18
CCDC144A-204ENST00000360524 WTAPQ15007 396 aa13.93□□□□□ -0.18
CCDC144A-204ENST00000360524 ZGPATQ8N5A5 531 aaKnown RBP13.93□□□□□ -0.18
CCDC144A-204ENST00000360524 OGFRQ9NZT2 677 aa13.93□□□□□ -0.18
CCDC144A-204ENST00000360524 MYCNP04198 464 aaPredicted RBP13.93□□□□□ -0.18
CCDC144A-204ENST00000360524 CETN1Q12798 172 aa13.93□□□□□ -0.18
CCDC144A-204ENST00000360524 SLC39A6Q13433 755 aa13.93□□□□□ -0.18
CCDC144A-204ENST00000360524 ATP2B3Q16720 1220 aa13.93□□□□□ -0.18
CCDC144A-204ENST00000360524 KANK3Q6NY19 840 aa13.93□□□□□ -0.18
CCDC144A-204ENST00000360524 SYCP2Q9BX26 1530 aa13.93□□□□□ -0.18
CCDC144A-204ENST00000360524 N4BP3O15049 544 aa13.93□□□□□ -0.18
CCDC144A-204ENST00000360524 STXBP4Q6ZWJ1 553 aa13.93□□□□□ -0.18
CCDC144A-204ENST00000360524 SYCP3Q8IZU3 236 aa13.93□□□□□ -0.18
CCDC144A-204ENST00000360524 FERMT2Q96AC1 680 aa13.93□□□□□ -0.18
CCDC144A-204ENST00000360524 ZNF518AQ6AHZ1 1483 aa13.93□□□□□ -0.18
CCDC144A-204ENST00000360524 CYP7A1P22680 504 aa13.93□□□□□ -0.18
CCDC144A-204ENST00000360524 KSR2Q6VAB6 950 aa13.93□□□□□ -0.18
CCDC144A-204ENST00000360524 CEP57Q86XR8 500 aa13.93□□□□□ -0.18
CCDC144A-204ENST00000360524 AOPEPQ8N6M6 819 aa13.93□□□□□ -0.18
CCDC144A-204ENST00000360524 MARCKSP29966 332 aaPredicted RBP13.93□□□□□ -0.18
CCDC144A-204ENST00000360524 DNAJC25Q9H1X3 360 aa13.93□□□□□ -0.18
CCDC144A-204ENST00000360524 EXOC1Q9NV70 894 aa13.93□□□□□ -0.18
CCDC144A-204ENST00000360524 ATP10BO94823 1461 aa13.92□□□□□ -0.18
CCDC144A-204ENST00000360524 VGLL3A8MV65 326 aa13.92□□□□□ -0.18
CCDC144A-204ENST00000360524 GRM8O00222 908 aa13.92□□□□□ -0.18
CCDC144A-204ENST00000360524 HSF2BPO75031 334 aa13.92□□□□□ -0.18
CCDC144A-204ENST00000360524 EIF4A2Q14240 407 aaKnown RBP13.92□□□□□ -0.18
CCDC144A-204ENST00000360524 MCM6Q14566 821 aa13.92□□□□□ -0.18
CCDC144A-204ENST00000360524 PAXIP1Q6ZW49 1069 aaPredicted RBP13.92□□□□□ -0.18
CCDC144A-204ENST00000360524 FAM114A1Q8IWE2 563 aa13.92□□□□□ -0.18
CCDC144A-204ENST00000360524 MRPL50Q8N5N7 158 aaKnown RBP13.92□□□□□ -0.18
CCDC144A-204ENST00000360524 PSMD1Q99460 953 aa13.92□□□□□ -0.18
CCDC144A-204ENST00000360524 LRRC27Q9C0I9 530 aa13.92□□□□□ -0.18
CCDC144A-204ENST00000360524 UGGT2Q9NYU1 1516 aa13.92□□□□□ -0.18
CCDC144A-204ENST00000360524 TSPY3P0CV98 308 aa13.92□□□□□ -0.18
CCDC144A-204ENST00000360524 TSPY8P0CW00 308 aa13.92□□□□□ -0.18
CCDC144A-204ENST00000360524 UBA7P41226 1012 aa13.92□□□□□ -0.18
CCDC144A-204ENST00000360524 CCDC186Q7Z3E2 898 aa13.92□□□□□ -0.18
CCDC144A-204ENST00000360524 SLC4A4Q9Y6R1 1079 aa13.92□□□□□ -0.18
CCDC144A-204ENST00000360524 SKILP12757 684 aa13.92□□□□□ -0.18
CCDC144A-204ENST00000360524 DNAI1Q9UI46 699 aa13.92□□□□□ -0.18
CCDC144A-204ENST00000360524 Q6ZUG5 572 aa13.92□□□□□ -0.18
CCDC144A-204ENST00000360524 ZSCAN16Q9H4T2 348 aaPredicted RBP13.92□□□□□ -0.18
CCDC144A-204ENST00000360524 SAMM50Q9Y512 469 aa13.92□□□□□ -0.18
CCDC144A-204ENST00000360524 PTGS1P23219 599 aa13.91□□□□□ -0.18
CCDC144A-204ENST00000360524 DNM1Q05193 864 aaKnown RBP13.91□□□□□ -0.18
CCDC144A-204ENST00000360524 TAOK3Q9H2K8 898 aa13.91□□□□□ -0.18
CCDC144A-204ENST00000360524 CNNM2Q9H8M5 875 aa13.91□□□□□ -0.18
CCDC144A-204ENST00000360524 PCDHB15Q9Y5E8 787 aa13.91□□□□□ -0.18
CCDC144A-204ENST00000360524 TOM1O60784 492 aa13.91□□□□□ -0.18
CCDC144A-204ENST00000360524 IL15P40933 162 aaPredicted RBP13.91□□□□□ -0.18
CCDC144A-204ENST00000360524 SPATA24Q86W54 205 aa13.91□□□□□ -0.18
CCDC144A-204ENST00000360524 TTC16Q8NEE8 873 aa13.91□□□□□ -0.18
CCDC144A-204ENST00000360524 ATP8B2P98198 1209 aa13.91□□□□□ -0.18
CCDC144A-204ENST00000360524 NLRP3Q96P20 1036 aa13.91□□□□□ -0.18
CCDC144A-204ENST00000360524 STAMBPO95630 424 aa13.91□□□□□ -0.18
CCDC144A-204ENST00000360524 LMBR1LQ6UX01 489 aa13.91□□□□□ -0.18
CCDC144A-204ENST00000360524 UTP14AQ9BVJ6 771 aaKnown RBP13.91□□□□□ -0.18
CCDC144A-204ENST00000360524 TMTC2Q8N394 836 aa13.9□□□□□ -0.18
CCDC144A-204ENST00000360524 ANKRD44Q8N8A2 993 aa13.9□□□□□ -0.18
CCDC144A-204ENST00000360524 ESR2Q92731 530 aa13.9□□□□□ -0.18
CCDC144A-204ENST00000360524 ALG1Q9BT22 464 aa13.9□□□□□ -0.18
CCDC144A-204ENST00000360524 STX8Q9UNK0 236 aa13.9□□□□□ -0.18
CCDC144A-204ENST00000360524 TNNQ9UQP3 1299 aa13.9□□□□□ -0.18
CCDC144A-204ENST00000360524 MCMDC2Q4G0Z9 681 aa13.9□□□□□ -0.18
CCDC144A-204ENST00000360524 IFIT1BQ5T764 474 aaKnown RBP13.9□□□□□ -0.18
CCDC144A-204ENST00000360524 RRAGDQ9NQL2 400 aaPredicted RBP13.9□□□□□ -0.18
CCDC144A-204ENST00000360524 ZBTB43O43298 467 aa13.9□□□□□ -0.18
CCDC144A-204ENST00000360524 SLU7O95391 586 aaKnown RBP13.9□□□□□ -0.18
CCDC144A-204ENST00000360524 DDB1Q16531 1140 aa13.9□□□□□ -0.18
CCDC144A-204ENST00000360524 C8orf58Q8NAV2 365 aa13.9□□□□□ -0.18
CCDC144A-204ENST00000360524 MPHOSPH6Q99547 160 aaKnown RBP13.9□□□□□ -0.18
CCDC144A-204ENST00000360524 NIP7Q9Y221 180 aaKnown RBP eCLIP13.9□□□□□ -0.18
CCDC144A-204ENST00000360524 PDE1AP54750 535 aa13.9□□□□□ -0.18
CCDC144A-204ENST00000360524 GBP6Q6ZN66 633 aa13.9□□□□□ -0.18
CCDC144A-204ENST00000360524 RGS22Q8NE09 1264 aa13.9□□□□□ -0.18
CCDC144A-204ENST00000360524 PAIP2Q9BPZ3 127 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms