RNA–Protein interactions for RNA: ENST00000360218.2

CTSE-202, Transcript of cathepsin E, humanhuman

TSL 1 (best) BASIC

Gene CTSE, Length 2,071 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSE-202ENST00000360218 RIPOR2Q9Y4F9 1068 aa13.35□□□□□ -0.27
CTSE-202ENST00000360218 SBF2Q86WG5 1849 aa13.35□□□□□ -0.27
CTSE-202ENST00000360218 SLC27A2O14975 620 aa13.35□□□□□ -0.27
CTSE-202ENST00000360218 SLFNL1Q499Z3 407 aa13.35□□□□□ -0.27
CTSE-202ENST00000360218 METTL24Q5JXM2 366 aa13.35□□□□□ -0.27
CTSE-202ENST00000360218 MEX3CQ5U5Q3 659 aaKnown RBP13.35□□□□□ -0.27
CTSE-202ENST00000360218 JAKMIP1Q96N16 626 aaKnown RBP13.35□□□□□ -0.27
CTSE-202ENST00000360218 CWC22Q9HCG8 908 aaKnown RBP13.35□□□□□ -0.27
CTSE-202ENST00000360218 ARAP2Q8WZ64 1704 aa13.34□□□□□ -0.27
CTSE-202ENST00000360218 TAF5LO75529 589 aa13.34□□□□□ -0.27
CTSE-202ENST00000360218 CYP2E1P05181 493 aaPredicted RBP13.34□□□□□ -0.27
CTSE-202ENST00000360218 HSPA1LP34931 641 aa13.34□□□□□ -0.27
CTSE-202ENST00000360218 AK2P54819 239 aa13.34□□□□□ -0.27
CTSE-202ENST00000360218 TTC39AQ5SRH9 613 aa13.34□□□□□ -0.27
CTSE-202ENST00000360218 UTP14AQ9BVJ6 771 aaKnown RBP13.34□□□□□ -0.27
CTSE-202ENST00000360218 CNNM1Q9NRU3 951 aa13.34□□□□□ -0.27
CTSE-202ENST00000360218 NIP7Q9Y221 180 aaKnown RBP eCLIP13.34□□□□□ -0.27
CTSE-202ENST00000360218 SH3TC1Q8TE82 1336 aa13.34□□□□□ -0.27
CTSE-202ENST00000360218 MYH7P12883 1935 aa13.34□□□□□ -0.27
CTSE-202ENST00000360218 ATP2B3Q16720 1220 aa13.33□□□□□ -0.27
CTSE-202ENST00000360218 GORABQ5T7V8 394 aa13.33□□□□□ -0.27
CTSE-202ENST00000360218 SMIM5Q71RC9 77 aa13.33□□□□□ -0.27
CTSE-202ENST00000360218 GBP4Q96PP9 640 aa13.33□□□□□ -0.27
CTSE-202ENST00000360218 LARP6Q9BRS8 491 aaKnown RBP13.33□□□□□ -0.27
CTSE-202ENST00000360218 AKAP11Q9UKA4 1901 aa13.33□□□□□ -0.28
CTSE-202ENST00000360218 TAF1LQ8IZX4 1826 aa13.33□□□□□ -0.28
CTSE-202ENST00000360218 DDX11L8A8MPP1 907 aa13.33□□□□□ -0.28
CTSE-202ENST00000360218 NTSR2O95665 410 aa13.33□□□□□ -0.28
CTSE-202ENST00000360218 SCARF1Q14162 830 aa13.33□□□□□ -0.28
CTSE-202ENST00000360218 PARP10Q53GL7 1025 aa13.33□□□□□ -0.28
CTSE-202ENST00000360218 VGLL2Q8N8G2 317 aa13.33□□□□□ -0.28
CTSE-202ENST00000360218 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.33□□□□□ -0.28
CTSE-202ENST00000360218 TAF6LQ9Y6J9 622 aa13.33□□□□□ -0.28
CTSE-202ENST00000360218 COL4A1P02462 1669 aa13.33□□□□□ -0.28
CTSE-202ENST00000360218 LY75O60449 1722 aa13.33□□□□□ -0.28
CTSE-202ENST00000360218 ZKSCAN1P17029 563 aaPredicted RBP13.32□□□□□ -0.28
CTSE-202ENST00000360218 NUCB2P80303 420 aa13.32□□□□□ -0.28
CTSE-202ENST00000360218 COL9A3Q14050 684 aaPredicted RBP13.32□□□□□ -0.28
CTSE-202ENST00000360218 MCMDC2Q4G0Z9 681 aa13.32□□□□□ -0.28
CTSE-202ENST00000360218 CCDC158Q5M9N0 1113 aa13.32□□□□□ -0.28
CTSE-202ENST00000360218 RUFY3Q7L099 469 aa13.32□□□□□ -0.28
CTSE-202ENST00000360218 ZSWIM6Q9HCJ5 1215 aa13.32□□□□□ -0.28
CTSE-202ENST00000360218 AFF2P51816 1311 aa13.32□□□□□ -0.28
CTSE-202ENST00000360218 RPAP1Q9BWH6 1393 aaPredicted RBP13.32□□□□□ -0.28
CTSE-202ENST00000360218 MYO5AQ9Y4I1 1855 aaKnown RBP13.32□□□□□ -0.28
CTSE-202ENST00000360218 CNTNAP4Q9C0A0 1308 aa13.32□□□□□ -0.28
CTSE-202ENST00000360218 AK7Q96M32 723 aa13.32□□□□□ -0.28
CTSE-202ENST00000360218 TM6SF1Q9BZW5 370 aa13.32□□□□□ -0.28
CTSE-202ENST00000360218 ZDHHC9Q9Y397 364 aa13.32□□□□□ -0.28
CTSE-202ENST00000360218 LAMA4Q16363 1823 aa13.31□□□□□ -0.28
CTSE-202ENST00000360218 FKBP4Q02790 459 aaKnown RBP eCLIP13.31□□□□□ -0.28
CTSE-202ENST00000360218 GJD4Q96KN9 370 aaPredicted RBP13.31□□□□□ -0.28
CTSE-202ENST00000360218 SEC31BQ9NQW1 1179 aa13.31□□□□□ -0.28
CTSE-202ENST00000360218 PDRG1Q9NUG6 133 aa13.31□□□□□ -0.28
CTSE-202ENST00000360218 CYP46A1Q9Y6A2 500 aa13.31□□□□□ -0.28
CTSE-202ENST00000360218 TRAK2O60296 914 aa13.3□□□□□ -0.28
CTSE-202ENST00000360218 LARGE1O95461 756 aa13.3□□□□□ -0.28
CTSE-202ENST00000360218 ZMYM1Q5SVZ6 1142 aa13.3□□□□□ -0.28
CTSE-202ENST00000360218 USPL1Q5W0Q7 1092 aa13.3□□□□□ -0.28
CTSE-202ENST00000360218 PI16Q6UXB8 463 aa13.3□□□□□ -0.28
CTSE-202ENST00000360218 IL27Q8NEV9 243 aa13.3□□□□□ -0.28
CTSE-202ENST00000360218 INTS4Q96HW7 963 aaKnown RBP13.3□□□□□ -0.28
CTSE-202ENST00000360218 ZNF652Q9Y2D9 606 aa13.3□□□□□ -0.28
CTSE-202ENST00000360218 A0A1B0GUL6 1792 aa13.3□□□□□ -0.28
CTSE-202ENST00000360218 RNF113AO15541 343 aaKnown RBP13.3□□□□□ -0.28
CTSE-202ENST00000360218 BAG4O95429 457 aaKnown RBP13.3□□□□□ -0.28
CTSE-202ENST00000360218 ZAP70P43403 619 aa13.3□□□□□ -0.28
CTSE-202ENST00000360218 VPS53Q5VIR6 699 aa13.3□□□□□ -0.28
CTSE-202ENST00000360218 RNF20Q5VTR2 975 aa13.3□□□□□ -0.28
CTSE-202ENST00000360218 HELBQ8NG08 1087 aaPredicted RBP13.3□□□□□ -0.28
CTSE-202ENST00000360218 HELLSQ9NRZ9 838 aa13.3□□□□□ -0.28
CTSE-202ENST00000360218 LIMCH1Q9UPQ0 1083 aa13.3□□□□□ -0.28
CTSE-202ENST00000360218 TAF1P21675 1872 aa13.3□□□□□ -0.28
CTSE-202ENST00000360218 ATRNO75882 1429 aa13.29□□□□□ -0.28
CTSE-202ENST00000360218 ABCC12Q96J65 1359 aa13.29□□□□□ -0.28
CTSE-202ENST00000360218 MAST3O60307 1309 aa13.29□□□□□ -0.28
CTSE-202ENST00000360218 PDE8BO95263 885 aa13.29□□□□□ -0.28
CTSE-202ENST00000360218 CLEC17AQ6ZS10 378 aa13.29□□□□□ -0.28
CTSE-202ENST00000360218 C4AP0C0L4 1744 aa13.29□□□□□ -0.28
CTSE-202ENST00000360218 C4BP0C0L5 1744 aa13.29□□□□□ -0.28
CTSE-202ENST00000360218 M0R2C6 588 aa13.28□□□□□ -0.28
CTSE-202ENST00000360218 FOXD4L5Q5VV16 416 aaPredicted RBP13.28□□□□□ -0.28
CTSE-202ENST00000360218 FOXD4L4Q8WXT5 416 aaPredicted RBP13.28□□□□□ -0.28
CTSE-202ENST00000360218 HMG20BQ9P0W2 317 aa13.28□□□□□ -0.28
CTSE-202ENST00000360218 U3KPZ7 1027 aaPredicted RBP13.28□□□□□ -0.28
CTSE-202ENST00000360218 COL24A1Q17RW2 1714 aa13.28□□□□□ -0.28
CTSE-202ENST00000360218 MROH5Q6ZUA9 1318 aa13.28□□□□□ -0.28
CTSE-202ENST00000360218 MCAMP43121 646 aa13.28□□□□□ -0.28
CTSE-202ENST00000360218 CCDC152Q4G0S7 254 aa13.28□□□□□ -0.28
CTSE-202ENST00000360218 CLEC4GQ6UXB4 293 aa13.28□□□□□ -0.28
CTSE-202ENST00000360218 TCEANC2Q96MN5 208 aa13.28□□□□□ -0.28
CTSE-202ENST00000360218 BCL2L12Q9HB09 334 aa13.28□□□□□ -0.28
CTSE-202ENST00000360218 CCNL1Q9UK58 526 aaPredicted RBP13.28□□□□□ -0.28
CTSE-202ENST00000360218 FGFR2P21802 821 aa13.27□□□□□ -0.28
CTSE-202ENST00000360218 PSMA5P28066 241 aa13.27□□□□□ -0.28
CTSE-202ENST00000360218 ERFEQ4G0M1 354 aa13.27□□□□□ -0.28
CTSE-202ENST00000360218 BICDL1Q6ZP65 573 aa13.27□□□□□ -0.28
CTSE-202ENST00000360218 SRP68Q9UHB9 627 aaKnown RBP13.27□□□□□ -0.28
CTSE-202ENST00000360218 RTL9Q8NET4 1388 aa13.27□□□□□ -0.29
CTSE-202ENST00000360218 SNAP23O00161 211 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms