RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 TAF6LQ9Y6J9 622 aa15.24■□□□□ 0.03
GGPS1-202ENST00000358966 RIC1Q4ADV7 1423 aa15.24■□□□□ 0.03
GGPS1-202ENST00000358966 METTL24Q5JXM2 366 aa15.24■□□□□ 0.03
GGPS1-202ENST00000358966 TRPC5Q9UL62 973 aaPredicted RBP15.24■□□□□ 0.03
GGPS1-202ENST00000358966 UTRNP46939 3433 aa15.24■□□□□ 0.03
GGPS1-202ENST00000358966 TAF1P21675 1872 aa15.24■□□□□ 0.03
GGPS1-202ENST00000358966 SH3TC1Q8TE82 1336 aa15.24■□□□□ 0.03
GGPS1-202ENST00000358966 PDE8AO60658 829 aa15.23■□□□□ 0.03
GGPS1-202ENST00000358966 USPL1Q5W0Q7 1092 aa15.23■□□□□ 0.03
GGPS1-202ENST00000358966 PRPF40BQ6NWY9 871 aaKnown RBP15.23■□□□□ 0.03
GGPS1-202ENST00000358966 UTP14AQ9BVJ6 771 aaKnown RBP15.23■□□□□ 0.03
GGPS1-202ENST00000358966 TAF5LO75529 589 aa15.23■□□□□ 0.03
GGPS1-202ENST00000358966 NTSR2O95665 410 aa15.23■□□□□ 0.03
GGPS1-202ENST00000358966 FKBP4Q02790 459 aaKnown RBP eCLIP15.23■□□□□ 0.03
GGPS1-202ENST00000358966 TBC1D9BQ66K14 1250 aa15.23■□□□□ 0.03
GGPS1-202ENST00000358966 KIAA1211Q6ZU35 1233 aa15.23■□□□□ 0.03
GGPS1-202ENST00000358966 ZGPATQ8N5A5 531 aaKnown RBP15.23■□□□□ 0.03
GGPS1-202ENST00000358966 XAGE2Q96GT9 111 aa15.23■□□□□ 0.03
GGPS1-202ENST00000358966 ANKRD18BA2A2Z9 1011 aa15.23■□□□□ 0.03
GGPS1-202ENST00000358966 HSPA4P34932 840 aa15.23■□□□□ 0.03
GGPS1-202ENST00000358966 BCL2L12Q9HB09 334 aa15.23■□□□□ 0.03
GGPS1-202ENST00000358966 LRRC4BQ9NT99 713 aa15.23■□□□□ 0.03
GGPS1-202ENST00000358966 RIPOR2Q9Y4F9 1068 aa15.23■□□□□ 0.03
GGPS1-202ENST00000358966 WTIPA6NIX2 430 aaPredicted RBP15.22■□□□□ 0.03
GGPS1-202ENST00000358966 CIAO1O76071 339 aa15.22■□□□□ 0.03
GGPS1-202ENST00000358966 TPM2P07951 284 aa15.22■□□□□ 0.03
GGPS1-202ENST00000358966 ADCK5Q3MIX3 580 aa15.22■□□□□ 0.03
GGPS1-202ENST00000358966 SNX14Q9Y5W7 946 aa15.22■□□□□ 0.03
GGPS1-202ENST00000358966 ATRNO75882 1429 aa15.22■□□□□ 0.03
GGPS1-202ENST00000358966 ERFEQ4G0M1 354 aa15.22■□□□□ 0.03
GGPS1-202ENST00000358966 GORABQ5T7V8 394 aa15.22■□□□□ 0.03
GGPS1-202ENST00000358966 HAUS7Q99871 368 aa15.22■□□□□ 0.03
GGPS1-202ENST00000358966 RREB1Q92766 1687 aa15.21■□□□□ 0.03
GGPS1-202ENST00000358966 MCCP23508 829 aa15.21■□□□□ 0.03
GGPS1-202ENST00000358966 SLC51AQ86UW1 340 aa15.21■□□□□ 0.03
GGPS1-202ENST00000358966 SBF2Q86WG5 1849 aa15.21■□□□□ 0.02
GGPS1-202ENST00000358966 IFIT1P09914 478 aaKnown RBP15.21■□□□□ 0.02
GGPS1-202ENST00000358966 PKP1Q13835 747 aa15.21■□□□□ 0.02
GGPS1-202ENST00000358966 PAG1Q9NWQ8 432 aa15.21■□□□□ 0.02
GGPS1-202ENST00000358966 CCDC171Q6TFL3 1326 aa15.2■□□□□ 0.02
GGPS1-202ENST00000358966 ST18O60284 1047 aa15.2■□□□□ 0.02
GGPS1-202ENST00000358966 TRIM37O94972 964 aa15.2■□□□□ 0.02
GGPS1-202ENST00000358966 NHSQ6T4R5 1651 aa15.2■□□□□ 0.02
GGPS1-202ENST00000358966 SPEF2Q9C093 1822 aa15.2■□□□□ 0.02
GGPS1-202ENST00000358966 KCNJ4P48050 445 aa15.2■□□□□ 0.02
GGPS1-202ENST00000358966 ATP2B3Q16720 1220 aa15.2■□□□□ 0.02
GGPS1-202ENST00000358966 TCEANC2Q96MN5 208 aa15.2■□□□□ 0.02
GGPS1-202ENST00000358966 RBM8AQ9Y5S9 174 aaKnown RBP15.2■□□□□ 0.02
GGPS1-202ENST00000358966 DDIT3P35638 169 aa15.19■□□□□ 0.02
GGPS1-202ENST00000358966 DDX60Q8IY21 1712 aaKnown RBP15.19■□□□□ 0.02
GGPS1-202ENST00000358966 RUFY2Q8WXA3 655 aa15.19■□□□□ 0.02
GGPS1-202ENST00000358966 VGLL2Q8N8G2 317 aa15.19■□□□□ 0.02
GGPS1-202ENST00000358966 ABCC12Q96J65 1359 aa15.19■□□□□ 0.02
GGPS1-202ENST00000358966 SRCAPQ6ZRS2 3230 aa15.19■□□□□ 0.02
GGPS1-202ENST00000358966 TTC39AQ5SRH9 613 aa15.18■□□□□ 0.02
GGPS1-202ENST00000358966 VPS53Q5VIR6 699 aa15.18■□□□□ 0.02
GGPS1-202ENST00000358966 FAM196AQ6ZSG2 479 aa15.18■□□□□ 0.02
GGPS1-202ENST00000358966 ARHGEF1Q92888 912 aaKnown RBP15.18■□□□□ 0.02
GGPS1-202ENST00000358966 CNTNAP4Q9C0A0 1308 aa15.18■□□□□ 0.02
GGPS1-202ENST00000358966 A0A0G2JLW4 131 aa15.18■□□□□ 0.02
GGPS1-202ENST00000358966 CASTP20810 708 aaKnown RBP15.18■□□□□ 0.02
GGPS1-202ENST00000358966 ZAP70P43403 619 aa15.18■□□□□ 0.02
GGPS1-202ENST00000358966 TMX3Q96JJ7 454 aa15.18■□□□□ 0.02
GGPS1-202ENST00000358966 CHMP5Q9NZZ3 219 aa15.18■□□□□ 0.02
GGPS1-202ENST00000358966 BRWD3Q6RI45 1802 aa15.18■□□□□ 0.02
GGPS1-202ENST00000358966 ONECUT3O60422 494 aaPredicted RBP15.17■□□□□ 0.02
GGPS1-202ENST00000358966 XRCC6P12956 609 aaKnown RBP eCLIP15.17■□□□□ 0.02
GGPS1-202ENST00000358966 KBTBD3Q8NAB2 608 aa15.17■□□□□ 0.02
GGPS1-202ENST00000358966 CHAMP1Q96JM3 812 aa15.17■□□□□ 0.02
GGPS1-202ENST00000358966 GPR108Q9NPR9 543 aa15.17■□□□□ 0.02
GGPS1-202ENST00000358966 MED23Q9ULK4 1368 aa15.17■□□□□ 0.02
GGPS1-202ENST00000358966 MCAMP43121 646 aa15.17■□□□□ 0.02
GGPS1-202ENST00000358966 PHKA1P46020 1223 aa15.17■□□□□ 0.02
GGPS1-202ENST00000358966 ZNF652Q9Y2D9 606 aa15.17■□□□□ 0.02
GGPS1-202ENST00000358966 RTCBQ9Y3I0 505 aaKnown RBP15.17■□□□□ 0.02
GGPS1-202ENST00000358966 BCORQ6W2J9 1755 aa15.17■□□□□ 0.02
GGPS1-202ENST00000358966 CICQ96RK0 1608 aaPredicted RBP15.17■□□□□ 0.02
GGPS1-202ENST00000358966 PARP10Q53GL7 1025 aa15.16■□□□□ 0.02
GGPS1-202ENST00000358966 FOXD4L5Q5VV16 416 aaPredicted RBP15.16■□□□□ 0.02
GGPS1-202ENST00000358966 FOXD4L4Q8WXT5 416 aaPredicted RBP15.16■□□□□ 0.02
GGPS1-202ENST00000358966 JAKMIP1Q96N16 626 aaKnown RBP15.16■□□□□ 0.02
GGPS1-202ENST00000358966 MPHOSPH8Q99549 860 aa15.16■□□□□ 0.02
GGPS1-202ENST00000358966 RPS6KA4O75676 772 aa15.16■□□□□ 0.02
GGPS1-202ENST00000358966 PDE8BO95263 885 aa15.16■□□□□ 0.02
GGPS1-202ENST00000358966 SSFA2P28290 1259 aa15.16■□□□□ 0.02
GGPS1-202ENST00000358966 MYO5AQ9Y4I1 1855 aaKnown RBP15.16■□□□□ 0.02
GGPS1-202ENST00000358966 ZPR1O75312 459 aa15.16■□□□□ 0.02
GGPS1-202ENST00000358966 NECTIN1Q15223 517 aa15.16■□□□□ 0.02
GGPS1-202ENST00000358966 CCDC158Q5M9N0 1113 aa15.16■□□□□ 0.02
GGPS1-202ENST00000358966 CREB3L3Q68CJ9 461 aa15.16■□□□□ 0.02
GGPS1-202ENST00000358966 PANK2Q9BZ23 570 aa15.16■□□□□ 0.02
GGPS1-202ENST00000358966 IQSEC3Q9UPP2 1182 aaPredicted RBP15.16■□□□□ 0.02
GGPS1-202ENST00000358966 TAF1LQ8IZX4 1826 aa15.15■□□□□ 0.02
GGPS1-202ENST00000358966 ANAPC15P60006 121 aa15.15■□□□□ 0.02
GGPS1-202ENST00000358966 MAP4K1Q92918 833 aa15.15■□□□□ 0.02
GGPS1-202ENST00000358966 AKAP2Q9Y2D5 859 aa15.15■□□□□ 0.02
GGPS1-202ENST00000358966 KRT27Q7Z3Y8 459 aa15.15■□□□□ 0.02
GGPS1-202ENST00000358966 SMAP1Q8IYB5 467 aaPredicted RBP15.15■□□□□ 0.02
GGPS1-202ENST00000358966 TNPO1Q92973 898 aaKnown RBP15.15■□□□□ 0.02
GGPS1-202ENST00000358966 NARFQ9UHQ1 456 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms