RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 UBXN4Q92575 508 aa7.67□□□□□ -1.18
CSDE1-203ENST00000358528 ZSCAN16Q9H4T2 348 aaPredicted RBP7.67□□□□□ -1.18
CSDE1-203ENST00000358528 ZSWIM4Q9H7M6 989 aa7.67□□□□□ -1.18
CSDE1-203ENST00000358528 SPTLC3Q9NUV7 552 aa7.67□□□□□ -1.18
CSDE1-203ENST00000358528 DNAI1Q9UI46 699 aa7.67□□□□□ -1.18
CSDE1-203ENST00000358528 A2ML1A8K2U0 1454 aa7.66□□□□□ -1.18
CSDE1-203ENST00000358528 MYO5BQ9ULV0 1848 aa7.66□□□□□ -1.18
CSDE1-203ENST00000358528 SLC3A2P08195 630 aaKnown RBP7.66□□□□□ -1.18
CSDE1-203ENST00000358528 RXRAP19793 462 aa7.66□□□□□ -1.18
CSDE1-203ENST00000358528 AKAP4Q5JQC9 854 aa7.66□□□□□ -1.18
CSDE1-203ENST00000358528 ANKRD13DQ6ZTN6 518 aa7.66□□□□□ -1.18
CSDE1-203ENST00000358528 NFATC2IPQ8NCF5 419 aa7.66□□□□□ -1.18
CSDE1-203ENST00000358528 ANKRD24Q8TF21 1146 aa7.66□□□□□ -1.18
CSDE1-203ENST00000358528 OGFRQ9NZT2 677 aa7.66□□□□□ -1.18
CSDE1-203ENST00000358528 GOLGA8BA8MQT2 603 aa7.66□□□□□ -1.18
CSDE1-203ENST00000358528 PES1O00541 588 aaKnown RBP7.66□□□□□ -1.18
CSDE1-203ENST00000358528 RNMTO43148 476 aaKnown RBP7.66□□□□□ -1.18
CSDE1-203ENST00000358528 TRIM29Q14134 588 aa7.66□□□□□ -1.18
CSDE1-203ENST00000358528 RRP12Q5JTH9 1297 aaKnown RBP7.66□□□□□ -1.18
CSDE1-203ENST00000358528 KRT222Q8N1A0 295 aa7.66□□□□□ -1.18
CSDE1-203ENST00000358528 PIAS4Q8N2W9 510 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-203ENST00000358528 ZFP91Q96JP5 570 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-203ENST00000358528 KIF20BQ96Q89 1820 aa7.66□□□□□ -1.18
CSDE1-203ENST00000358528 ZBTB3Q9H5J0 574 aa7.66□□□□□ -1.18
CSDE1-203ENST00000358528 ORC3Q9UBD5 711 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-203ENST00000358528 CTAGE5O15320 804 aa7.66□□□□□ -1.18
CSDE1-203ENST00000358528 ZSCAN20P17040 1043 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-203ENST00000358528 SKIDA1Q1XH10 827 aa7.66□□□□□ -1.18
CSDE1-203ENST00000358528 OLFM4Q6UX06 510 aa7.66□□□□□ -1.18
CSDE1-203ENST00000358528 MRPS27Q92552 414 aaKnown RBP7.66□□□□□ -1.18
CSDE1-203ENST00000358528 ARGLU1Q9NWB6 273 aaPredicted RBP7.66□□□□□ -1.18
CSDE1-203ENST00000358528 PRDM4Q9UKN5 801 aa7.66□□□□□ -1.18
CSDE1-203ENST00000358528 REREQ9P2R6 1566 aa7.65□□□□□ -1.18
CSDE1-203ENST00000358528 SLU7O95391 586 aaKnown RBP7.65□□□□□ -1.18
CSDE1-203ENST00000358528 TNNT3P45378 269 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-203ENST00000358528 SCRN1Q12765 414 aa7.65□□□□□ -1.18
CSDE1-203ENST00000358528 TOB2Q14106 344 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-203ENST00000358528 TTC39AQ5SRH9 613 aa7.65□□□□□ -1.18
CSDE1-203ENST00000358528 LRRC8AQ8IWT6 810 aa7.65□□□□□ -1.18
CSDE1-203ENST00000358528 NEO1Q92859 1461 aa7.65□□□□□ -1.18
CSDE1-203ENST00000358528 SIGLEC1Q9BZZ2 1709 aa7.65□□□□□ -1.18
CSDE1-203ENST00000358528 KLF18A0A0U1RQI7 1052 aa7.65□□□□□ -1.18
CSDE1-203ENST00000358528 GIGYF1O75420 1035 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-203ENST00000358528 TAF5LO75529 589 aa7.65□□□□□ -1.18
CSDE1-203ENST00000358528 GTF2F1P35269 517 aaKnown RBP eCLIP7.65□□□□□ -1.181e-7■■■■■ 29.4
CSDE1-203ENST00000358528 CPLX2Q6PUV4 134 aaKnown RBP7.65□□□□□ -1.18
CSDE1-203ENST00000358528 THEMISQ8N1K5 641 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-203ENST00000358528 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-203ENST00000358528 EPB41L2O43491 1005 aaKnown RBP7.65□□□□□ -1.19
CSDE1-203ENST00000358528 CYP21A2P08686 494 aa7.65□□□□□ -1.19
CSDE1-203ENST00000358528 PDIA4P13667 645 aaKnown RBP7.65□□□□□ -1.19
CSDE1-203ENST00000358528 ST3GAL1Q11201 340 aa7.65□□□□□ -1.19
CSDE1-203ENST00000358528 ERCC6LQ2NKX8 1250 aa7.65□□□□□ -1.19
CSDE1-203ENST00000358528 TEX35Q5T0J7 233 aa7.65□□□□□ -1.19
CSDE1-203ENST00000358528 CCDC66A2RUB6 948 aa7.64□□□□□ -1.19
CSDE1-203ENST00000358528 TNNI3KQ59H18 835 aa7.64□□□□□ -1.19
CSDE1-203ENST00000358528 DHX32Q7L7V1 743 aaKnown RBP7.64□□□□□ -1.19
CSDE1-203ENST00000358528 ZNF397Q8NF99 534 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-203ENST00000358528 ZNF594Q96JF6 807 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-203ENST00000358528 FEZ1Q99689 392 aa7.64□□□□□ -1.19
CSDE1-203ENST00000358528 FUCA2Q9BTY2 467 aa7.64□□□□□ -1.19
CSDE1-203ENST00000358528 FPGT-TNNI3KV9GXZ4 949 aa7.64□□□□□ -1.19
CSDE1-203ENST00000358528 TATP17735 454 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-203ENST00000358528 CABP4P57796 275 aa7.64□□□□□ -1.19
CSDE1-203ENST00000358528 AMOTQ4VCS5 1084 aa7.64□□□□□ -1.19
CSDE1-203ENST00000358528 ARHGAP29Q52LW3 1261 aa7.64□□□□□ -1.19
CSDE1-203ENST00000358528 TDRD7Q8NHU6 1098 aaKnown RBP7.64□□□□□ -1.19
CSDE1-203ENST00000358528 CPLX3Q8WVH0 158 aa7.64□□□□□ -1.19
CSDE1-203ENST00000358528 IP6K1Q92551 441 aa7.64□□□□□ -1.19
CSDE1-203ENST00000358528 CHMP4CQ96CF2 233 aa7.64□□□□□ -1.19
CSDE1-203ENST00000358528 GJB4Q9NTQ9 266 aa7.64□□□□□ -1.19
CSDE1-203ENST00000358528 DBNLQ9UJU6 430 aaKnown RBP7.64□□□□□ -1.19
CSDE1-203ENST00000358528 NEMFO60524 1076 aa7.64□□□□□ -1.19
CSDE1-203ENST00000358528 FAM160A1Q05DH4 1040 aa7.64□□□□□ -1.19
CSDE1-203ENST00000358528 GOLGA8FQ08AF8 430 aa7.64□□□□□ -1.19
CSDE1-203ENST00000358528 GOLGA8DPQ0D2H9 430 aa7.64□□□□□ -1.19
CSDE1-203ENST00000358528 EPHA10Q5JZY3 1008 aa7.64□□□□□ -1.19
CSDE1-203ENST00000358528 TMCO3Q6UWJ1 677 aa7.64□□□□□ -1.19
CSDE1-203ENST00000358528 XPO4Q9C0E2 1151 aaKnown RBP7.64□□□□□ -1.19
CSDE1-203ENST00000358528 GPHNQ9NQX3 736 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-203ENST00000358528 DDX21Q9NR30 783 aaKnown RBP eCLIP7.64□□□□□ -1.19
CSDE1-203ENST00000358528 CEP126Q9P2H0 1117 aa7.64□□□□□ -1.19
CSDE1-203ENST00000358528 DLG5Q8TDM6 1919 aa7.64□□□□□ -1.19
CSDE1-203ENST00000358528 DIP2CQ9Y2E4 1556 aa7.64□□□□□ -1.19
CSDE1-203ENST00000358528 TMEM2Q9UHN6 1383 aa7.64□□□□□ -1.19
CSDE1-203ENST00000358528 MICU3Q86XE3 530 aa7.63□□□□□ -1.19
CSDE1-203ENST00000358528 DHX16O60231 1041 aaKnown RBP7.63□□□□□ -1.19
CSDE1-203ENST00000358528 IDH1O75874 414 aaKnown RBP7.63□□□□□ -1.19
CSDE1-203ENST00000358528 TOP1P11387 765 aaKnown RBP7.63□□□□□ -1.19
CSDE1-203ENST00000358528 TRHP20396 242 aaPredicted RBP7.63□□□□□ -1.19
CSDE1-203ENST00000358528 GSDMDP57764 484 aa7.63□□□□□ -1.19
CSDE1-203ENST00000358528 CHRNA2Q15822 529 aa7.63□□□□□ -1.19
CSDE1-203ENST00000358528 IMMTQ16891 758 aaKnown RBP7.63□□□□□ -1.19
CSDE1-203ENST00000358528 CCDC158Q5M9N0 1113 aa7.63□□□□□ -1.19
CSDE1-203ENST00000358528 KLHL10Q6JEL2 608 aa7.63□□□□□ -1.19
CSDE1-203ENST00000358528 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.63□□□□□ -1.19
CSDE1-203ENST00000358528 KCNH5Q8NCM2 988 aa7.63□□□□□ -1.19
CSDE1-203ENST00000358528 PAG1Q9NWQ8 432 aa7.63□□□□□ -1.19
CSDE1-203ENST00000358528 SPTLC2O15270 562 aa7.63□□□□□ -1.19
CSDE1-203ENST00000358528 HMGB1P09429 215 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms