RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 TMEM63CQ9P1W3 806 aa15.25■□□□□ 0.03
RTFDC1-202ENST00000357348 SH3TC1Q8TE82 1336 aa15.25■□□□□ 0.03
RTFDC1-202ENST00000357348 MYH3P11055 1940 aa15.25■□□□□ 0.03
RTFDC1-202ENST00000357348 ERC2O15083 957 aa15.25■□□□□ 0.03
RTFDC1-202ENST00000357348 NPHP1O15259 732 aa15.25■□□□□ 0.03
RTFDC1-202ENST00000357348 NTSR2O95665 410 aa15.25■□□□□ 0.03
RTFDC1-202ENST00000357348 GOLGB1Q14789 3259 aaKnown RBP15.25■□□□□ 0.03
RTFDC1-202ENST00000357348 MBD3O95983 291 aa15.24■□□□□ 0.03
RTFDC1-202ENST00000357348 NCLP19338 710 aaKnown RBP15.24■□□□□ 0.03
RTFDC1-202ENST00000357348 CUL4AQ13619 759 aa15.24■□□□□ 0.03
RTFDC1-202ENST00000357348 CSPP1Q1MSJ5 1256 aa15.24■□□□□ 0.03
RTFDC1-202ENST00000357348 RABL6Q3YEC7 729 aaPredicted RBP15.24■□□□□ 0.03
RTFDC1-202ENST00000357348 ERFEQ4G0M1 354 aa15.24■□□□□ 0.03
RTFDC1-202ENST00000357348 PARP10Q53GL7 1025 aa15.24■□□□□ 0.03
RTFDC1-202ENST00000357348 COL23A1Q86Y22 540 aaPredicted RBP15.24■□□□□ 0.03
RTFDC1-202ENST00000357348 LRRCC1Q9C099 1032 aa15.24■□□□□ 0.03
RTFDC1-202ENST00000357348 GYS1P13807 737 aa15.24■□□□□ 0.03
RTFDC1-202ENST00000357348 BAG6P46379 1132 aa15.24■□□□□ 0.03
RTFDC1-202ENST00000357348 MCM2P49736 904 aa15.24■□□□□ 0.03
RTFDC1-202ENST00000357348 RBM27Q9P2N5 1060 aaKnown RBP15.24■□□□□ 0.03
RTFDC1-202ENST00000357348 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.24■□□□□ 0.03
RTFDC1-202ENST00000357348 BRD1O95696 1058 aa15.23■□□□□ 0.03
RTFDC1-202ENST00000357348 ADRA2BP18089 450 aa15.23■□□□□ 0.03
RTFDC1-202ENST00000357348 NBPF5PQ86XG9 351 aaPredicted RBP15.23■□□□□ 0.03
RTFDC1-202ENST00000357348 RFX5P48382 616 aaPredicted RBP15.23■□□□□ 0.03
RTFDC1-202ENST00000357348 PTPN12Q05209 780 aaKnown RBP15.23■□□□□ 0.03
RTFDC1-202ENST00000357348 NFIXQ14938 502 aa15.23■□□□□ 0.03
RTFDC1-202ENST00000357348 GREM2Q9H772 168 aa15.23■□□□□ 0.03
RTFDC1-202ENST00000357348 CTSWP56202 376 aa15.22■□□□□ 0.03
RTFDC1-202ENST00000357348 G3BP1Q13283 466 aaKnown RBP eCLIP15.22■□□□□ 0.035e-10■■□□□ 13.8
RTFDC1-202ENST00000357348 CCDC57Q2TAC2 916 aa15.22■□□□□ 0.03
RTFDC1-202ENST00000357348 TSHZ3Q63HK5 1081 aa15.22■□□□□ 0.03
RTFDC1-202ENST00000357348 MSL1Q68DK7 614 aa15.22■□□□□ 0.03
RTFDC1-202ENST00000357348 TTLL11Q8NHH1 800 aa15.22■□□□□ 0.03
RTFDC1-202ENST00000357348 RHPN1Q8TCX5 695 aa15.22■□□□□ 0.03
RTFDC1-202ENST00000357348 CCDC39Q9UFE4 941 aa15.22■□□□□ 0.03
RTFDC1-202ENST00000357348 CDHR2Q9BYE9 1310 aa15.22■□□□□ 0.03
RTFDC1-202ENST00000357348 DDX60Q8IY21 1712 aaKnown RBP15.22■□□□□ 0.03
RTFDC1-202ENST00000357348 PDE8AO60658 829 aa15.21■□□□□ 0.03
RTFDC1-202ENST00000357348 R3HCC1Q9Y3T6 440 aaKnown RBP15.21■□□□□ 0.03
RTFDC1-202ENST00000357348 SALL3Q9BXA9 1300 aa15.21■□□□□ 0.03
RTFDC1-202ENST00000357348 TAF1P21675 1872 aa15.21■□□□□ 0.03
RTFDC1-202ENST00000357348 RGPD3A6NKT7 1758 aaPredicted RBP15.21■□□□□ 0.03
RTFDC1-202ENST00000357348 RGPD4Q7Z3J3 1758 aa15.21■□□□□ 0.03
RTFDC1-202ENST00000357348 INTS4Q96HW7 963 aaKnown RBP15.21■□□□□ 0.03
RTFDC1-202ENST00000357348 PUS3Q9BZE2 481 aaKnown RBP15.21■□□□□ 0.03
RTFDC1-202ENST00000357348 NSFL1CQ9UNZ2 370 aaKnown RBP15.21■□□□□ 0.03
RTFDC1-202ENST00000357348 ITGA6P23229 1130 aa15.2■□□□□ 0.02
RTFDC1-202ENST00000357348 TAF7LQ5H9L4 462 aa15.2■□□□□ 0.02
RTFDC1-202ENST00000357348 C3orf67Q6ZVT6 689 aa15.2■□□□□ 0.02
RTFDC1-202ENST00000357348 TMX3Q96JJ7 454 aa15.2■□□□□ 0.02
RTFDC1-202ENST00000357348 PNPLA7Q6ZV29 1317 aa15.2■□□□□ 0.02
RTFDC1-202ENST00000357348 SASH1O94885 1247 aa15.2■□□□□ 0.02
RTFDC1-202ENST00000357348 PDE1AP54750 535 aa15.2■□□□□ 0.02
RTFDC1-202ENST00000357348 ANAPC15P60006 121 aa15.2■□□□□ 0.02
RTFDC1-202ENST00000357348 IFIT5Q13325 482 aaKnown RBP15.2■□□□□ 0.02
RTFDC1-202ENST00000357348 SLC15A2Q16348 729 aa15.2■□□□□ 0.02
RTFDC1-202ENST00000357348 LRRC24Q50LG9 513 aa15.2■□□□□ 0.02
RTFDC1-202ENST00000357348 ABCC12Q96J65 1359 aa15.2■□□□□ 0.02
RTFDC1-202ENST00000357348 PLA2G12BQ9BX93 195 aa15.2■□□□□ 0.02
RTFDC1-202ENST00000357348 PDGFDQ9GZP0 370 aaPredicted RBP15.2■□□□□ 0.02
RTFDC1-202ENST00000357348 CASZ1Q86V15 1759 aa15.19■□□□□ 0.02
RTFDC1-202ENST00000357348 SYCE3A1L190 88 aa15.19■□□□□ 0.02
RTFDC1-202ENST00000357348 DYNC1I1O14576 645 aa15.19■□□□□ 0.02
RTFDC1-202ENST00000357348 CSF1RP07333 972 aa15.19■□□□□ 0.02
RTFDC1-202ENST00000357348 KIF1BPQ96EK5 621 aa15.19■□□□□ 0.02
RTFDC1-202ENST00000357348 SEC31BQ9NQW1 1179 aa15.19■□□□□ 0.02
RTFDC1-202ENST00000357348 RAB11FIP3O75154 756 aa15.19■□□□□ 0.02
RTFDC1-202ENST00000357348 TPTE2Q6XPS3 522 aa15.19■□□□□ 0.02
RTFDC1-202ENST00000357348 MTERF4Q7Z6M4 381 aaKnown RBP15.19■□□□□ 0.02
RTFDC1-202ENST00000357348 COPRSQ9NQ92 184 aa15.19■□□□□ 0.02
RTFDC1-202ENST00000357348 STK32BQ9NY57 414 aa15.19■□□□□ 0.02
RTFDC1-202ENST00000357348 HSP90AB4PQ58FF6 505 aa15.18■□□□□ 0.02
RTFDC1-202ENST00000357348 EPB41L2O43491 1005 aaKnown RBP15.17■□□□□ 0.02
RTFDC1-202ENST00000357348 TFCP2Q12800 502 aa15.17■□□□□ 0.02
RTFDC1-202ENST00000357348 SPEF2Q9C093 1822 aa15.17■□□□□ 0.02
RTFDC1-202ENST00000357348 CARMIL3Q8ND23 1372 aa15.17■□□□□ 0.02
RTFDC1-202ENST00000357348 UQCRHLA0A096LP55 91 aa15.17■□□□□ 0.02
RTFDC1-202ENST00000357348 ANKRD18BA2A2Z9 1011 aa15.17■□□□□ 0.02
RTFDC1-202ENST00000357348 SERPINB2P05120 415 aa15.17■□□□□ 0.02
RTFDC1-202ENST00000357348 UQCRHP07919 91 aa15.17■□□□□ 0.02
RTFDC1-202ENST00000357348 DDR1Q08345 913 aa15.17■□□□□ 0.02
RTFDC1-202ENST00000357348 CNBD1Q8NA66 436 aa15.17■□□□□ 0.02
RTFDC1-202ENST00000357348 ESYT1Q9BSJ8 1104 aa15.17■□□□□ 0.02
RTFDC1-202ENST00000357348 NYXQ9GZU5 481 aa15.17■□□□□ 0.02
RTFDC1-202ENST00000357348 CCDC8Q9H0W5 538 aaPredicted RBP15.17■□□□□ 0.02
RTFDC1-202ENST00000357348 COL24A1Q17RW2 1714 aa15.17■□□□□ 0.02
RTFDC1-202ENST00000357348 SASS6Q6UVJ0 657 aa15.16■□□□□ 0.02
RTFDC1-202ENST00000357348 NEK4P51957 841 aa15.16■□□□□ 0.02
RTFDC1-202ENST00000357348 ATG9AQ7Z3C6 839 aa15.16■□□□□ 0.02
RTFDC1-202ENST00000357348 AACSQ86V21 672 aa15.16■□□□□ 0.02
RTFDC1-202ENST00000357348 CLASRPQ8N2M8 674 aaKnown RBP15.16■□□□□ 0.02
RTFDC1-202ENST00000357348 LAMB2P55268 1798 aa15.15■□□□□ 0.02
RTFDC1-202ENST00000357348 AK9Q5TCS8 1911 aa15.15■□□□□ 0.02
RTFDC1-202ENST00000357348 HMGB2P26583 209 aaKnown RBP15.15■□□□□ 0.02
RTFDC1-202ENST00000357348 TM4SF1P30408 202 aa15.15■□□□□ 0.02
RTFDC1-202ENST00000357348 PRR5LQ6MZQ0 368 aa15.15■□□□□ 0.02
RTFDC1-202ENST00000357348 LDHAL6AQ6ZMR3 332 aa15.15■□□□□ 0.02
RTFDC1-202ENST00000357348 ERC1Q8IUD2 1116 aa15.15■□□□□ 0.02
RTFDC1-202ENST00000357348 KLHL34Q8N239 644 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms