RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 PI4KAP2A4QPH2 592 aa14.17□□□□□ -0.14
SMARCAL1-201ENST00000357276 ATL3Q6DD88 541 aa14.17□□□□□ -0.14
SMARCAL1-201ENST00000357276 NAA16Q6N069 864 aaPredicted RBP14.17□□□□□ -0.14
SMARCAL1-201ENST00000357276 CCAR1Q8IX12 1150 aaKnown RBP14.17□□□□□ -0.14
SMARCAL1-201ENST00000357276 PI4KAP1Q8N8J0 262 aa14.17□□□□□ -0.14
SMARCAL1-201ENST00000357276 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.17□□□□□ -0.14
SMARCAL1-201ENST00000357276 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.17□□□□□ -0.14
SMARCAL1-201ENST00000357276 ARMCX5Q6P1M9 558 aa14.17□□□□□ -0.14
SMARCAL1-201ENST00000357276 IPO4Q8TEX9 1081 aaKnown RBP14.17□□□□□ -0.14
SMARCAL1-201ENST00000357276 NCAPD2Q15021 1401 aa14.17□□□□□ -0.14
SMARCAL1-201ENST00000357276 COL15A1P39059 1388 aa14.17□□□□□ -0.14
SMARCAL1-201ENST00000357276 SASH1O94885 1247 aa14.16□□□□□ -0.14
SMARCAL1-201ENST00000357276 EIF4A1P60842 406 aaKnown RBP14.16□□□□□ -0.14
SMARCAL1-201ENST00000357276 FAM160A1Q05DH4 1040 aa14.16□□□□□ -0.14
SMARCAL1-201ENST00000357276 LLPHQ9BRT6 129 aaKnown RBP14.16□□□□□ -0.14
SMARCAL1-201ENST00000357276 STRCQ7RTU9 1775 aa14.16□□□□□ -0.14
SMARCAL1-201ENST00000357276 ERICH4A6NGS2 130 aa14.16□□□□□ -0.14
SMARCAL1-201ENST00000357276 TAF5LO75529 589 aa14.16□□□□□ -0.14
SMARCAL1-201ENST00000357276 CCDC150Q8NCX0 1101 aa14.16□□□□□ -0.14
SMARCAL1-201ENST00000357276 KIF1AQ12756 1690 aa14.16□□□□□ -0.14
SMARCAL1-201ENST00000357276 NEDD4P46934 1319 aa14.16□□□□□ -0.14
SMARCAL1-201ENST00000357276 STRCP1A6NGW2 1772 aa14.16□□□□□ -0.14
SMARCAL1-201ENST00000357276 BECN2A8MW95 431 aa14.16□□□□□ -0.14
SMARCAL1-201ENST00000357276 ALDH1L1O75891 902 aa14.16□□□□□ -0.14
SMARCAL1-201ENST00000357276 HNRNPH2P55795 449 aaKnown RBP14.16□□□□□ -0.14
SMARCAL1-201ENST00000357276 OS9Q13438 667 aaPredicted RBP14.16□□□□□ -0.14
SMARCAL1-201ENST00000357276 ZNF589Q86UQ0 364 aaPredicted RBP14.16□□□□□ -0.14
SMARCAL1-201ENST00000357276 AACSQ86V21 672 aa14.16□□□□□ -0.14
SMARCAL1-201ENST00000357276 EAF2Q96CJ1 260 aaPredicted RBP14.16□□□□□ -0.14
SMARCAL1-201ENST00000357276 BCL11BQ9C0K0 894 aaPredicted RBP14.16□□□□□ -0.14
SMARCAL1-201ENST00000357276 LMO7Q8WWI1 1683 aa14.15□□□□□ -0.14
SMARCAL1-201ENST00000357276 PHLPP2Q6ZVD8 1323 aa14.15□□□□□ -0.14
SMARCAL1-201ENST00000357276 STK3Q13188 491 aa14.15□□□□□ -0.14
SMARCAL1-201ENST00000357276 KRT32Q14532 448 aa14.15□□□□□ -0.14
SMARCAL1-201ENST00000357276 DHX8Q14562 1220 aaKnown RBP14.15□□□□□ -0.14
SMARCAL1-201ENST00000357276 CEP57L1Q8IYX8 460 aa14.15□□□□□ -0.14
SMARCAL1-201ENST00000357276 CHPF2Q9P2E5 772 aa14.15□□□□□ -0.14
SMARCAL1-201ENST00000357276 NAP1L2Q9ULW6 460 aaPredicted RBP14.15□□□□□ -0.14
SMARCAL1-201ENST00000357276 LMTK3Q96Q04 1460 aa14.15□□□□□ -0.14
SMARCAL1-201ENST00000357276 ATP8B1O43520 1251 aa14.15□□□□□ -0.14
SMARCAL1-201ENST00000357276 DDX11Q96FC9 970 aa14.15□□□□□ -0.14
SMARCAL1-201ENST00000357276 TSPYL1Q9H0U9 437 aa14.15□□□□□ -0.14
SMARCAL1-201ENST00000357276 ORC3Q9UBD5 711 aaPredicted RBP14.15□□□□□ -0.14
SMARCAL1-201ENST00000357276 UTYO14607 1347 aa14.15□□□□□ -0.14
SMARCAL1-201ENST00000357276 MUM1L1Q5H9M0 696 aa14.14□□□□□ -0.15
SMARCAL1-201ENST00000357276 AOPEPQ8N6M6 819 aa14.14□□□□□ -0.15
SMARCAL1-201ENST00000357276 PA2G4Q9UQ80 394 aaKnown RBP14.14□□□□□ -0.15
SMARCAL1-201ENST00000357276 SYT10Q6XYQ8 523 aa14.14□□□□□ -0.15
SMARCAL1-201ENST00000357276 FMR1NBQ8N0W7 255 aaPredicted RBP14.14□□□□□ -0.15
SMARCAL1-201ENST00000357276 SCRN1Q12765 414 aa14.14□□□□□ -0.15
SMARCAL1-201ENST00000357276 NAT10Q9H0A0 1025 aaKnown RBP14.14□□□□□ -0.15
SMARCAL1-201ENST00000357276 DCCP43146 1447 aa14.14□□□□□ -0.15
SMARCAL1-201ENST00000357276 SALL1Q9NSC2 1324 aa14.13□□□□□ -0.15
SMARCAL1-201ENST00000357276 TRIM65Q6PJ69 517 aa14.13□□□□□ -0.15
SMARCAL1-201ENST00000357276 RFX7Q2KHR2 1363 aa14.13□□□□□ -0.15
SMARCAL1-201ENST00000357276 A0A087WWV3 80 aa14.13□□□□□ -0.15
SMARCAL1-201ENST00000357276 NUTM2FA1L443 756 aa14.13□□□□□ -0.15
SMARCAL1-201ENST00000357276 PFKFB2O60825 505 aa14.13□□□□□ -0.15
SMARCAL1-201ENST00000357276 ARHGAP29Q52LW3 1261 aa14.13□□□□□ -0.15
SMARCAL1-201ENST00000357276 NUTM2GQ5VZR2 741 aa14.13□□□□□ -0.15
SMARCAL1-201ENST00000357276 ILDR1Q86SU0 546 aaPredicted RBP14.13□□□□□ -0.15
SMARCAL1-201ENST00000357276 KAZALD1Q96I82 304 aa14.13□□□□□ -0.15
SMARCAL1-201ENST00000357276 USP28Q96RU2 1077 aa14.13□□□□□ -0.15
SMARCAL1-201ENST00000357276 CHMP4AQ9BY43 222 aa14.13□□□□□ -0.15
SMARCAL1-201ENST00000357276 FTOQ9C0B1 505 aaKnown RBP eCLIP14.13□□□□□ -0.15
SMARCAL1-201ENST00000357276 FANCGO15287 622 aa14.12□□□□□ -0.15
SMARCAL1-201ENST00000357276 KINO60870 393 aaKnown RBP14.12□□□□□ -0.15
SMARCAL1-201ENST00000357276 ETF1P62495 437 aaKnown RBP14.12□□□□□ -0.15
SMARCAL1-201ENST00000357276 PDE4CQ08493 712 aa14.12□□□□□ -0.15
SMARCAL1-201ENST00000357276 CCDC73Q6ZRK6 1079 aa14.12□□□□□ -0.15
SMARCAL1-201ENST00000357276 NSUN7Q8NE18 718 aaKnown RBP14.12□□□□□ -0.15
SMARCAL1-201ENST00000357276 NEK1Q96PY6 1258 aa14.12□□□□□ -0.15
SMARCAL1-201ENST00000357276 KDM4FA0A1W2PPD8 638 aa14.12□□□□□ -0.15
SMARCAL1-201ENST00000357276 VGLL3A8MV65 326 aa14.12□□□□□ -0.15
SMARCAL1-201ENST00000357276 H3BQV1 296 aa14.12□□□□□ -0.15
SMARCAL1-201ENST00000357276 TADA3O75528 432 aa14.12□□□□□ -0.15
SMARCAL1-201ENST00000357276 CTDNEP1O95476 244 aa14.12□□□□□ -0.15
SMARCAL1-201ENST00000357276 CDK11BP21127 795 aaKnown RBP14.12□□□□□ -0.15
SMARCAL1-201ENST00000357276 AMPHP49418 695 aa14.12□□□□□ -0.15
SMARCAL1-201ENST00000357276 IFFO2Q5TF58 517 aa14.12□□□□□ -0.15
SMARCAL1-201ENST00000357276 FEZ2Q9UHY8 353 aaPredicted RBP14.12□□□□□ -0.15
SMARCAL1-201ENST00000357276 SOX12O15370 315 aa14.12□□□□□ -0.15
SMARCAL1-201ENST00000357276 HOXC9P31274 260 aa14.12□□□□□ -0.15
SMARCAL1-201ENST00000357276 Q6ZUG5 572 aa14.12□□□□□ -0.15
SMARCAL1-201ENST00000357276 NFATC2IPQ8NCF5 419 aa14.12□□□□□ -0.15
SMARCAL1-201ENST00000357276 SRRTQ9BXP5 876 aaKnown RBP14.12□□□□□ -0.15
SMARCAL1-201ENST00000357276 XPO4Q9C0E2 1151 aaKnown RBP14.12□□□□□ -0.15
SMARCAL1-201ENST00000357276 TMX1Q9H3N1 280 aa14.12□□□□□ -0.15
SMARCAL1-201ENST00000357276 TLR7Q9NYK1 1049 aaKnown RBP14.12□□□□□ -0.15
SMARCAL1-201ENST00000357276 NCAPHQ15003 741 aa14.11□□□□□ -0.15
SMARCAL1-201ENST00000357276 AGXT2Q9BYV1 514 aa14.11□□□□□ -0.15
SMARCAL1-201ENST00000357276 A0A1W2PQ27 194 aa14.11□□□□□ -0.15
SMARCAL1-201ENST00000357276 A0A1W2PQ64 194 aa14.11□□□□□ -0.15
SMARCAL1-201ENST00000357276 A0A1W2PQD8 194 aa14.11□□□□□ -0.15
SMARCAL1-201ENST00000357276 RAD51AP2Q09MP3 1159 aa14.11□□□□□ -0.15
SMARCAL1-201ENST00000357276 FSD1Q9BTV5 496 aa14.11□□□□□ -0.15
SMARCAL1-201ENST00000357276 EFCAB8A8MWE9 144 aa14.1□□□□□ -0.15
SMARCAL1-201ENST00000357276 NPHP1O15259 732 aa14.1□□□□□ -0.15
SMARCAL1-201ENST00000357276 EIF2S2P20042 333 aaKnown RBP14.1□□□□□ -0.15
SMARCAL1-201ENST00000357276 SFPQP23246 707 aaKnown RBP eCLIP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms