RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 ZBTB43O43298 467 aa13.48□□□□□ -0.25
COL9A1-202ENST00000357250 CCDC172P0C7W6 258 aa13.48□□□□□ -0.25
COL9A1-202ENST00000357250 SYKP43405 635 aa13.48□□□□□ -0.25
COL9A1-202ENST00000357250 ATL3Q6DD88 541 aa13.48□□□□□ -0.25
COL9A1-202ENST00000357250 COPS6Q7L5N1 327 aa13.48□□□□□ -0.25
COL9A1-202ENST00000357250 BRF1Q92994 677 aa13.48□□□□□ -0.25
COL9A1-202ENST00000357250 RBM8AQ9Y5S9 174 aaKnown RBP13.48□□□□□ -0.25
COL9A1-202ENST00000357250 GCOM1H8Y6P7 765 aaPredicted RBP13.48□□□□□ -0.25
COL9A1-202ENST00000357250 MYZAPP0CAP1 466 aa13.48□□□□□ -0.25
COL9A1-202ENST00000357250 WTAPQ15007 396 aa13.48□□□□□ -0.25
COL9A1-202ENST00000357250 MRPS27Q92552 414 aaKnown RBP13.48□□□□□ -0.25
COL9A1-202ENST00000357250 PLA2R1Q13018 1463 aa13.48□□□□□ -0.25
COL9A1-202ENST00000357250 ANKRD62A6NC57 917 aa13.48□□□□□ -0.25
COL9A1-202ENST00000357250 HLA-DOAP06340 250 aa13.48□□□□□ -0.25
COL9A1-202ENST00000357250 TDRD12Q587J7 1177 aaKnown RBP13.48□□□□□ -0.25
COL9A1-202ENST00000357250 XAGE3Q8WTP9 111 aa13.48□□□□□ -0.25
COL9A1-202ENST00000357250 CALCOCO1Q9P1Z2 691 aa13.48□□□□□ -0.25
COL9A1-202ENST00000357250 CHD1O14646 1710 aa13.48□□□□□ -0.25
COL9A1-202ENST00000357250 NGLY1Q96IV0 654 aa13.48□□□□□ -0.25
COL9A1-202ENST00000357250 NPHP3Q7Z494 1330 aa13.47□□□□□ -0.25
COL9A1-202ENST00000357250 BMS1Q14692 1282 aaKnown RBP13.47□□□□□ -0.25
COL9A1-202ENST00000357250 CWF19L2Q2TBE0 894 aaKnown RBP13.47□□□□□ -0.25
COL9A1-202ENST00000357250 MICU3Q86XE3 530 aa13.47□□□□□ -0.25
COL9A1-202ENST00000357250 KRI1Q8N9T8 703 aaKnown RBP13.47□□□□□ -0.25
COL9A1-202ENST00000357250 PA2G4Q9UQ80 394 aaKnown RBP13.47□□□□□ -0.25
COL9A1-202ENST00000357250 KLF18A0A0U1RQI7 1052 aa13.47□□□□□ -0.25
COL9A1-202ENST00000357250 GNAT2P19087 354 aa13.47□□□□□ -0.25
COL9A1-202ENST00000357250 ATP2B3Q16720 1220 aa13.47□□□□□ -0.25
COL9A1-202ENST00000357250 C19orf44Q9H6X5 657 aa13.47□□□□□ -0.25
COL9A1-202ENST00000357250 CCDC40Q4G0X9 1142 aa13.47□□□□□ -0.25
COL9A1-202ENST00000357250 C16orf45Q96MC5 204 aaPredicted RBP13.47□□□□□ -0.25
COL9A1-202ENST00000357250 SRRTQ9BXP5 876 aaKnown RBP13.47□□□□□ -0.25
COL9A1-202ENST00000357250 SLC26A6Q9BXS9 759 aa13.47□□□□□ -0.25
COL9A1-202ENST00000357250 MYO5CQ9NQX4 1742 aa13.46□□□□□ -0.25
COL9A1-202ENST00000357250 F13A1P00488 732 aa13.46□□□□□ -0.25
COL9A1-202ENST00000357250 CALM1P0DP23 149 aa13.46□□□□□ -0.25
COL9A1-202ENST00000357250 CALM2P0DP24 149 aa13.46□□□□□ -0.25
COL9A1-202ENST00000357250 CALM3P0DP25 149 aa13.46□□□□□ -0.25
COL9A1-202ENST00000357250 PRKCSHP14314 528 aaPredicted RBP13.46□□□□□ -0.25
COL9A1-202ENST00000357250 CLCN1P35523 988 aa13.46□□□□□ -0.25
COL9A1-202ENST00000357250 C8orf34Q49A92 452 aa13.46□□□□□ -0.25
COL9A1-202ENST00000357250 CCDC82Q8N4S0 544 aa13.46□□□□□ -0.25
COL9A1-202ENST00000357250 ACSBG1Q96GR2 724 aa13.46□□□□□ -0.25
COL9A1-202ENST00000357250 GDPD2Q9HCC8 539 aa13.46□□□□□ -0.25
COL9A1-202ENST00000357250 ZBTB40Q9NUA8 1239 aa13.46□□□□□ -0.25
COL9A1-202ENST00000357250 ARHGEF5Q12774 1597 aa13.46□□□□□ -0.25
COL9A1-202ENST00000357250 CKAP4Q07065 602 aaKnown RBP13.46□□□□□ -0.25
COL9A1-202ENST00000357250 PHF23Q9BUL5 403 aaPredicted RBP13.46□□□□□ -0.25
COL9A1-202ENST00000357250 ERMNQ8TAM6 284 aa13.46□□□□□ -0.26
COL9A1-202ENST00000357250 DDX12PQ92771 950 aa13.46□□□□□ -0.26
COL9A1-202ENST00000357250 LGR6Q9HBX8 967 aa13.46□□□□□ -0.26
COL9A1-202ENST00000357250 CABP5Q9NP86 173 aa13.45□□□□□ -0.26
COL9A1-202ENST00000357250 TRPM2O94759 1503 aa13.45□□□□□ -0.26
COL9A1-202ENST00000357250 SSR1P43307 286 aaKnown RBP13.45□□□□□ -0.26
COL9A1-202ENST00000357250 SMARCC1Q92922 1105 aaPredicted RBP13.45□□□□□ -0.26
COL9A1-202ENST00000357250 HCLS1P14317 486 aaPredicted RBP13.45□□□□□ -0.26
COL9A1-202ENST00000357250 IFFO1Q0D2I5 559 aa13.45□□□□□ -0.26
COL9A1-202ENST00000357250 SMC1AQ14683 1233 aaKnown RBP13.45□□□□□ -0.26
COL9A1-202ENST00000357250 ZCRB1Q8TBF4 217 aaKnown RBP13.45□□□□□ -0.26
COL9A1-202ENST00000357250 DYDC1Q8WWB3 177 aa13.45□□□□□ -0.26
COL9A1-202ENST00000357250 METP08581 1390 aa13.45□□□□□ -0.26
COL9A1-202ENST00000357250 CYLC1P35663 651 aaPredicted RBP13.45□□□□□ -0.26
COL9A1-202ENST00000357250 RAB3GAP1Q15042 981 aa13.45□□□□□ -0.26
COL9A1-202ENST00000357250 ALG1Q9BT22 464 aa13.45□□□□□ -0.26
COL9A1-202ENST00000357250 PPP1R1BQ9UD71 204 aaPredicted RBP13.45□□□□□ -0.26
COL9A1-202ENST00000357250 N4BP3O15049 544 aa13.44□□□□□ -0.26
COL9A1-202ENST00000357250 WDHD1O75717 1129 aaPredicted RBP13.44□□□□□ -0.26
COL9A1-202ENST00000357250 NEBLO76041 1014 aa13.44□□□□□ -0.26
COL9A1-202ENST00000357250 RTN1Q16799 776 aa13.44□□□□□ -0.26
COL9A1-202ENST00000357250 CEP135Q66GS9 1140 aa13.44□□□□□ -0.26
COL9A1-202ENST00000357250 MSH6P52701 1360 aa13.44□□□□□ -0.26
COL9A1-202ENST00000357250 HOXB7P09629 217 aa13.44□□□□□ -0.26
COL9A1-202ENST00000357250 CEP85Q6P2H3 762 aa13.44□□□□□ -0.26
COL9A1-202ENST00000357250 ADGBQ8N7X0 1667 aa13.44□□□□□ -0.26
COL9A1-202ENST00000357250 CALML3P27482 149 aa13.44□□□□□ -0.26
COL9A1-202ENST00000357250 PLVAPQ9BX97 442 aa13.44□□□□□ -0.26
COL9A1-202ENST00000357250 UBA5Q9GZZ9 404 aa13.44□□□□□ -0.26
COL9A1-202ENST00000357250 MAP3K5Q99683 1374 aa13.44□□□□□ -0.26
COL9A1-202ENST00000357250 IDEP14735 1019 aa13.44□□□□□ -0.26
COL9A1-202ENST00000357250 MAP2K1Q02750 393 aaPredicted RBP13.44□□□□□ -0.26
COL9A1-202ENST00000357250 USP37Q86T82 979 aa13.44□□□□□ -0.26
COL9A1-202ENST00000357250 BIN1O00499 593 aa13.43□□□□□ -0.26
COL9A1-202ENST00000357250 UBASH3AP57075 661 aa13.43□□□□□ -0.26
COL9A1-202ENST00000357250 BRAPQ7Z569 592 aa13.43□□□□□ -0.26
COL9A1-202ENST00000357250 TCEANC2Q96MN5 208 aa13.43□□□□□ -0.26
COL9A1-202ENST00000357250 EXOC1Q9NV70 894 aa13.43□□□□□ -0.26
COL9A1-202ENST00000357250 TRMT1Q9NXH9 659 aaKnown RBP13.43□□□□□ -0.26
COL9A1-202ENST00000357250 HAND2P61296 217 aa13.43□□□□□ -0.26
COL9A1-202ENST00000357250 OTUD7AQ8TE49 926 aaPredicted RBP13.43□□□□□ -0.26
COL9A1-202ENST00000357250 HOOK3Q86VS8 718 aa13.43□□□□□ -0.26
COL9A1-202ENST00000357250 CPLX3Q8WVH0 158 aa13.43□□□□□ -0.26
COL9A1-202ENST00000357250 AOX1Q06278 1338 aa13.43□□□□□ -0.26
COL9A1-202ENST00000357250 RTL9Q8NET4 1388 aa13.43□□□□□ -0.26
COL9A1-202ENST00000357250 TMEM2Q9UHN6 1383 aa13.43□□□□□ -0.26
COL9A1-202ENST00000357250 TUBBP07437 444 aa13.43□□□□□ -0.26
COL9A1-202ENST00000357250 USP48Q86UV5 1035 aa13.43□□□□□ -0.26
COL9A1-202ENST00000357250 TRIM47Q96LD4 638 aa13.43□□□□□ -0.26
COL9A1-202ENST00000357250 GSTTP1A0A1W2PQM5 241 aa13.42□□□□□ -0.26
COL9A1-202ENST00000357250 GNG11P61952 73 aa13.42□□□□□ -0.26
COL9A1-202ENST00000357250 LMBR1LQ6UX01 489 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms