RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 CTAGE4Q8IX94 777 aa7.54□□□□□ -1.2
TRIM38-201ENST00000357085 FAM76AQ8TAV0 307 aa7.54□□□□□ -1.2
TRIM38-201ENST00000357085 MRPS27Q92552 414 aaKnown RBP7.54□□□□□ -1.2
TRIM38-201ENST00000357085 PSD3Q9NYI0 1048 aa7.54□□□□□ -1.2
TRIM38-201ENST00000357085 GJB2P29033 226 aa7.54□□□□□ -1.2
TRIM38-201ENST00000357085 PKP1Q13835 747 aa7.54□□□□□ -1.2
TRIM38-201ENST00000357085 FAM114A1Q8IWE2 563 aa7.54□□□□□ -1.2
TRIM38-201ENST00000357085 C14orf93Q9H972 538 aaKnown RBP7.54□□□□□ -1.2
TRIM38-201ENST00000357085 A2ML1A8K2U0 1454 aa7.54□□□□□ -1.2
TRIM38-201ENST00000357085 ELL2O00472 640 aaPredicted RBP7.54□□□□□ -1.2
TRIM38-201ENST00000357085 GADD45BO75293 160 aaPredicted RBP7.54□□□□□ -1.2
TRIM38-201ENST00000357085 GIGYF1O75420 1035 aaPredicted RBP7.54□□□□□ -1.2
TRIM38-201ENST00000357085 PNMA6AP0CW24 399 aaPredicted RBP7.54□□□□□ -1.2
TRIM38-201ENST00000357085 KMT5BQ4FZB7 885 aa7.54□□□□□ -1.2
TRIM38-201ENST00000357085 CENPHQ9H3R5 247 aa7.54□□□□□ -1.2
TRIM38-201ENST00000357085 HOXB7P09629 217 aa7.54□□□□□ -1.2
TRIM38-201ENST00000357085 GLI2P10070 1586 aa7.54□□□□□ -1.2
TRIM38-201ENST00000357085 IFFO1Q0D2I5 559 aa7.54□□□□□ -1.2
TRIM38-201ENST00000357085 FSD1Q9BTV5 496 aa7.54□□□□□ -1.2
TRIM38-201ENST00000357085 ZNF853P0CG23 659 aa7.54□□□□□ -1.2
TRIM38-201ENST00000357085 CUL4AQ13619 759 aa7.54□□□□□ -1.2
TRIM38-201ENST00000357085 SMC1AQ14683 1233 aaKnown RBP7.54□□□□□ -1.2
TRIM38-201ENST00000357085 YEATS4O95619 227 aa7.53□□□□□ -1.2
TRIM38-201ENST00000357085 ATP2B1P20020 1258 aa7.53□□□□□ -1.2
TRIM38-201ENST00000357085 EVCP57679 992 aa7.53□□□□□ -1.2
TRIM38-201ENST00000357085 HOMEZQ8IX15 550 aa7.53□□□□□ -1.2
TRIM38-201ENST00000357085 AATKQ6ZMQ8 1374 aa7.53□□□□□ -1.2
TRIM38-201ENST00000357085 BUB1BO60566 1050 aaPredicted RBP7.53□□□□□ -1.2
TRIM38-201ENST00000357085 ACTN2P35609 894 aa7.53□□□□□ -1.2
TRIM38-201ENST00000357085 WHAMMP3Q1A5X7 153 aa7.53□□□□□ -1.2
TRIM38-201ENST00000357085 TAX1BP1Q86VP1 789 aa7.53□□□□□ -1.2
TRIM38-201ENST00000357085 MCM6Q14566 821 aa7.53□□□□□ -1.2
TRIM38-201ENST00000357085 TRIM22Q8IYM9 498 aa7.53□□□□□ -1.2
TRIM38-201ENST00000357085 AFAP1L1Q8TED9 768 aa7.53□□□□□ -1.2
TRIM38-201ENST00000357085 VAV2P52735 878 aa7.53□□□□□ -1.2
TRIM38-201ENST00000357085 CHMP4BP1P59074 171 aa7.53□□□□□ -1.2
TRIM38-201ENST00000357085 MIPOL1Q8TD10 442 aa7.53□□□□□ -1.2
TRIM38-201ENST00000357085 ARHGEF28Q8N1W1 1705 aaKnown RBP7.53□□□□□ -1.2
TRIM38-201ENST00000357085 GNG11P61952 73 aa7.53□□□□□ -1.2
TRIM38-201ENST00000357085 ERCC6LQ2NKX8 1250 aa7.53□□□□□ -1.2
TRIM38-201ENST00000357085 DNAJC25Q9H1X3 360 aa7.53□□□□□ -1.2
TRIM38-201ENST00000357085 CLCN6P51797 869 aa7.52□□□□□ -1.2
TRIM38-201ENST00000357085 DRP2Q13474 957 aa7.52□□□□□ -1.2
TRIM38-201ENST00000357085 CFAP100Q494V2 611 aa7.52□□□□□ -1.2
TRIM38-201ENST00000357085 JARID2Q92833 1246 aaPredicted RBP7.52□□□□□ -1.2
TRIM38-201ENST00000357085 MAGEC2Q9UBF1 373 aaPredicted RBP7.52□□□□□ -1.2
TRIM38-201ENST00000357085 TSKSQ9UJT2 592 aa7.52□□□□□ -1.2
TRIM38-201ENST00000357085 TTC14Q96N46 770 aa7.52□□□□□ -1.21
TRIM38-201ENST00000357085 KCND1Q9NSA2 647 aa7.52□□□□□ -1.21
TRIM38-201ENST00000357085 A0A1W2PQ27 194 aa7.52□□□□□ -1.21
TRIM38-201ENST00000357085 A0A1W2PQ64 194 aa7.52□□□□□ -1.21
TRIM38-201ENST00000357085 A0A1W2PQD8 194 aa7.52□□□□□ -1.21
TRIM38-201ENST00000357085 MAP3K5Q99683 1374 aa7.52□□□□□ -1.21
TRIM38-201ENST00000357085 CLTCQ00610 1675 aaKnown RBP7.52□□□□□ -1.21
TRIM38-201ENST00000357085 SYT1P21579 422 aa7.52□□□□□ -1.21
TRIM38-201ENST00000357085 PPP2R3AQ06190 1150 aa7.52□□□□□ -1.21
TRIM38-201ENST00000357085 NBPF9Q3BBW0 867 aa7.52□□□□□ -1.21
TRIM38-201ENST00000357085 TNNQ9UQP3 1299 aa7.52□□□□□ -1.21
TRIM38-201ENST00000357085 ATXN2Q99700 1313 aaKnown RBP7.52□□□□□ -1.21
TRIM38-201ENST00000357085 FGFR1OPO95684 399 aaKnown RBP7.52□□□□□ -1.21
TRIM38-201ENST00000357085 GUCY2CP25092 1073 aa7.52□□□□□ -1.21
TRIM38-201ENST00000357085 DNM1Q05193 864 aaKnown RBP7.52□□□□□ -1.21
TRIM38-201ENST00000357085 DHX37Q8IY37 1157 aaKnown RBP7.52□□□□□ -1.21
TRIM38-201ENST00000357085 CCDC12Q8WUD4 166 aaPredicted RBP7.52□□□□□ -1.21
TRIM38-201ENST00000357085 JAKMIP1Q96N16 626 aaKnown RBP7.52□□□□□ -1.21
TRIM38-201ENST00000357085 MRPL50Q8N5N7 158 aaKnown RBP7.52□□□□□ -1.21
TRIM38-201ENST00000357085 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.52□□□□□ -1.21
TRIM38-201ENST00000357085 RMND1Q9NWS8 449 aa7.52□□□□□ -1.21
TRIM38-201ENST00000357085 SLC3A2P08195 630 aaKnown RBP7.51□□□□□ -1.21
TRIM38-201ENST00000357085 INPP5BP32019 993 aa7.51□□□□□ -1.21
TRIM38-201ENST00000357085 PAIP2Q9BPZ3 127 aaKnown RBP7.51□□□□□ -1.21
TRIM38-201ENST00000357085 A0A087WUV0 522 aaPredicted RBP7.51□□□□□ -1.21
TRIM38-201ENST00000357085 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.51□□□□□ -1.21
TRIM38-201ENST00000357085 CBX8Q9HC52 389 aa7.51□□□□□ -1.21
TRIM38-201ENST00000357085 PDE6BP35913 854 aa7.51□□□□□ -1.21
TRIM38-201ENST00000357085 RBM6P78332 1123 aaKnown RBP7.51□□□□□ -1.21
TRIM38-201ENST00000357085 FERMT3Q86UX7 667 aa7.51□□□□□ -1.21
TRIM38-201ENST00000357085 DACT1Q9NYF0 836 aa7.51□□□□□ -1.21
TRIM38-201ENST00000357085 TSPYL4Q9UJ04 414 aa7.51□□□□□ -1.21
TRIM38-201ENST00000357085 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.51□□□□□ -1.21
TRIM38-201ENST00000357085 SATB1Q01826 763 aa7.51□□□□□ -1.21
TRIM38-201ENST00000357085 PLCB4Q15147 1175 aa7.51□□□□□ -1.21
TRIM38-201ENST00000357085 RRP12Q5JTH9 1297 aaKnown RBP7.51□□□□□ -1.21
TRIM38-201ENST00000357085 PPFIA4O75335 1185 aa7.51□□□□□ -1.21
TRIM38-201ENST00000357085 ECHDC1Q9NTX5 307 aa7.51□□□□□ -1.21
TRIM38-201ENST00000357085 MRVI1Q9Y6F6 885 aa7.51□□□□□ -1.21
TRIM38-201ENST00000357085 N4BP2Q86UW6 1770 aaPredicted RBP7.51□□□□□ -1.21
TRIM38-201ENST00000357085 CYP2E1P05181 493 aaPredicted RBP7.5□□□□□ -1.21
TRIM38-201ENST00000357085 KRT83P78385 493 aa7.5□□□□□ -1.21
TRIM38-201ENST00000357085 SH2D4BQ5SQS7 431 aa7.5□□□□□ -1.21
TRIM38-201ENST00000357085 MSL3Q8N5Y2 521 aaKnown RBP7.5□□□□□ -1.21
TRIM38-201ENST00000357085 TTC21AQ8NDW8 1320 aa7.5□□□□□ -1.21
TRIM38-201ENST00000357085 NEBLO76041 1014 aa7.5□□□□□ -1.21
TRIM38-201ENST00000357085 CLNS1AP54105 237 aaKnown RBP7.5□□□□□ -1.21
TRIM38-201ENST00000357085 SRLQ86TD4 932 aa7.5□□□□□ -1.21
TRIM38-201ENST00000357085 LRRC8AQ8IWT6 810 aa7.5□□□□□ -1.21
TRIM38-201ENST00000357085 FBXO18Q8NFZ0 1043 aa7.5□□□□□ -1.21
TRIM38-201ENST00000357085 VIPAS39Q9H9C1 493 aa7.5□□□□□ -1.21
TRIM38-201ENST00000357085 DMRT2Q9Y5R5 561 aa7.5□□□□□ -1.21
TRIM38-201ENST00000357085 USO1O60763 962 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms