RNA–Protein interactions for RNA: ENST00000356861.9

TNPO2-201, Transcript of transportin 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNPO2, Length 4,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-201ENST00000356861 DHX32Q7L7V1 743 aaKnown RBP20.82■□□□□ 0.92
TNPO2-201ENST00000356861 NBPF5PQ86XG9 351 aaPredicted RBP20.82■□□□□ 0.92
TNPO2-201ENST00000356861 PRIMPOLQ96LW4 560 aa20.82■□□□□ 0.92
TNPO2-201ENST00000356861 NBPF4Q96M43 638 aa20.82■□□□□ 0.92
TNPO2-201ENST00000356861 CRACR2AQ9BSW2 395 aa20.82■□□□□ 0.92
TNPO2-201ENST00000356861 CALML4Q96GE6 196 aa20.82■□□□□ 0.92
TNPO2-201ENST00000356861 SNW1Q13573 536 aaKnown RBP20.82■□□□□ 0.92
TNPO2-201ENST00000356861 TNIP1Q15025 636 aa20.81■□□□□ 0.92
TNPO2-201ENST00000356861 MTIF2P46199 727 aaKnown RBP20.81■□□□□ 0.92
TNPO2-201ENST00000356861 CGNQ9P2M7 1197 aaKnown RBP20.81■□□□□ 0.92
TNPO2-201ENST00000356861 STX8Q9UNK0 236 aa20.81■□□□□ 0.92
TNPO2-201ENST00000356861 IDEP14735 1019 aa20.8■□□□□ 0.92
TNPO2-201ENST00000356861 CNKSR2Q8WXI2 1034 aa20.8■□□□□ 0.92
TNPO2-201ENST00000356861 IQSEC3Q9UPP2 1182 aaPredicted RBP20.8■□□□□ 0.92
TNPO2-201ENST00000356861 SBNO2Q9Y2G9 1366 aa20.8■□□□□ 0.92
TNPO2-201ENST00000356861 USO1O60763 962 aaKnown RBP20.8■□□□□ 0.92
TNPO2-201ENST00000356861 PRKCSHP14314 528 aaPredicted RBP20.8■□□□□ 0.92
TNPO2-201ENST00000356861 SYT1P21579 422 aa20.8■□□□□ 0.92
TNPO2-201ENST00000356861 VPS36Q86VN1 386 aa20.8■□□□□ 0.92
TNPO2-201ENST00000356861 ZKSCAN5Q9Y2L8 839 aa20.8■□□□□ 0.92
TNPO2-201ENST00000356861 CCDC186Q7Z3E2 898 aa20.79■□□□□ 0.92
TNPO2-201ENST00000356861 ATP6V1AP38606 617 aa20.79■□□□□ 0.92
TNPO2-201ENST00000356861 IFIT1BQ5T764 474 aaKnown RBP20.79■□□□□ 0.92
TNPO2-201ENST00000356861 UBA5Q9GZZ9 404 aa20.79■□□□□ 0.92
TNPO2-201ENST00000356861 DNAJC25Q9H1X3 360 aa20.79■□□□□ 0.92
TNPO2-201ENST00000356861 VAT1LQ9HCJ6 419 aa20.79■□□□□ 0.92
TNPO2-201ENST00000356861 ATP10AO60312 1499 aa20.79■□□□□ 0.92
TNPO2-201ENST00000356861 ZNF790Q6PG37 636 aa20.79■□□□□ 0.92
TNPO2-201ENST00000356861 CUL5Q93034 780 aa20.79■□□□□ 0.92
TNPO2-201ENST00000356861 JAKMIP3Q5VZ66 844 aa20.79■□□□□ 0.92
TNPO2-201ENST00000356861 AOX1Q06278 1338 aa20.79■□□□□ 0.92
TNPO2-201ENST00000356861 KIAA0754O94854 1291 aa20.78■□□□□ 0.92
TNPO2-201ENST00000356861 ARHGEF5Q12774 1597 aa20.78■□□□□ 0.92
TNPO2-201ENST00000356861 SPTLC2O15270 562 aa20.78■□□□□ 0.92
TNPO2-201ENST00000356861 UBASH3AP57075 661 aa20.78■□□□□ 0.92
TNPO2-201ENST00000356861 MAP9Q49MG5 647 aa20.78■□□□□ 0.92
TNPO2-201ENST00000356861 ZNF830Q96NB3 372 aaPredicted RBP20.78■□□□□ 0.92
TNPO2-201ENST00000356861 NIP7Q9Y221 180 aaKnown RBP eCLIP20.78■□□□□ 0.925e-23■■■□□ 15.6
TNPO2-201ENST00000356861 RFC4P35249 363 aa20.78■□□□□ 0.92
TNPO2-201ENST00000356861 TYRO3Q06418 890 aa20.78■□□□□ 0.92
TNPO2-201ENST00000356861 APOBRQ0VD83 1088 aa20.78■□□□□ 0.92
TNPO2-201ENST00000356861 CCDC191Q8NCU4 936 aa20.78■□□□□ 0.92
TNPO2-201ENST00000356861 NOLC1Q14978 699 aaKnown RBP eCLIP20.78■□□□□ 0.921e-323■■■■■ 64.4
TNPO2-201ENST00000356861 NAA16Q6N069 864 aaPredicted RBP20.78■□□□□ 0.92
TNPO2-201ENST00000356861 NLRP3Q96P20 1036 aa20.78■□□□□ 0.92
TNPO2-201ENST00000356861 PAXBP1Q9Y5B6 917 aa20.78■□□□□ 0.92
TNPO2-201ENST00000356861 PTPDC1A2A3K4 754 aa20.77■□□□□ 0.92
TNPO2-201ENST00000356861 DYNC1I1O14576 645 aa20.77■□□□□ 0.92
TNPO2-201ENST00000356861 GSTO1P78417 241 aa20.77■□□□□ 0.92
TNPO2-201ENST00000356861 TDRD12Q587J7 1177 aaKnown RBP20.77■□□□□ 0.92
TNPO2-201ENST00000356861 DZIP3Q86Y13 1208 aaKnown RBP20.77■□□□□ 0.92
TNPO2-201ENST00000356861 MBD5Q9P267 1494 aa20.77■□□□□ 0.92
TNPO2-201ENST00000356861 MARCKSP29966 332 aaPredicted RBP20.77■□□□□ 0.92
TNPO2-201ENST00000356861 SMARCC1Q92922 1105 aaPredicted RBP20.77■□□□□ 0.92
TNPO2-201ENST00000356861 SIRT1Q96EB6 747 aa20.77■□□□□ 0.92
TNPO2-201ENST00000356861 CEP170Q5SW79 1584 aa20.77■□□□□ 0.92
TNPO2-201ENST00000356861 UTP14AQ9BVJ6 771 aaKnown RBP20.77■□□□□ 0.92
TNPO2-201ENST00000356861 N4BP3O15049 544 aa20.77■□□□□ 0.91
TNPO2-201ENST00000356861 CEP135Q66GS9 1140 aa20.77■□□□□ 0.91
TNPO2-201ENST00000356861 CHST3Q7LGC8 479 aa20.77■□□□□ 0.91
TNPO2-201ENST00000356861 IRS4O14654 1257 aaPredicted RBP20.76■□□□□ 0.91
TNPO2-201ENST00000356861 SKILP12757 684 aa20.76■□□□□ 0.91
TNPO2-201ENST00000356861 ADGBQ8N7X0 1667 aa20.76■□□□□ 0.91
TNPO2-201ENST00000356861 USP19O94966 1318 aa20.76■□□□□ 0.91
TNPO2-201ENST00000356861 NEFHP12036 1026 aa20.76■□□□□ 0.91
TNPO2-201ENST00000356861 MCM3P25205 808 aa20.76■□□□□ 0.91
TNPO2-201ENST00000356861 PAFAH1B1P43034 410 aa20.76■□□□□ 0.91
TNPO2-201ENST00000356861 CBX1P83916 185 aa20.76■□□□□ 0.91
TNPO2-201ENST00000356861 CPA1P15085 419 aa20.76■□□□□ 0.91
TNPO2-201ENST00000356861 GNAT2P19087 354 aa20.76■□□□□ 0.91
TNPO2-201ENST00000356861 SLC4A8Q2Y0W8 1093 aa20.76■□□□□ 0.91
TNPO2-201ENST00000356861 HS1BP3Q53T59 392 aa20.76■□□□□ 0.91
TNPO2-201ENST00000356861 CCDC178Q5BJE1 867 aa20.76■□□□□ 0.91
TNPO2-201ENST00000356861 FAM114A1Q8IWE2 563 aa20.76■□□□□ 0.91
TNPO2-201ENST00000356861 SETDB2Q96T68 719 aa20.76■□□□□ 0.91
TNPO2-201ENST00000356861 PLEKHG3A1L390 1219 aa20.75■□□□□ 0.91
TNPO2-201ENST00000356861 GNAQP50148 359 aa20.75■□□□□ 0.91
TNPO2-201ENST00000356861 METTL22Q9BUU2 404 aaPredicted RBP20.75■□□□□ 0.91
TNPO2-201ENST00000356861 RMND1Q9NWS8 449 aa20.75■□□□□ 0.91
TNPO2-201ENST00000356861 DDB1Q16531 1140 aa20.75■□□□□ 0.91
TNPO2-201ENST00000356861 PNMA6EA0A0J9YXQ4 647 aa20.75■□□□□ 0.91
TNPO2-201ENST00000356861 AOPEPQ8N6M6 819 aa20.75■□□□□ 0.91
TNPO2-201ENST00000356861 PCDH11XQ9BZA7 1347 aa20.75■□□□□ 0.91
TNPO2-201ENST00000356861 PCDH11YQ9BZA8 1340 aa20.75■□□□□ 0.91
TNPO2-201ENST00000356861 KIAA0232Q92628 1395 aa20.75■□□□□ 0.91
TNPO2-201ENST00000356861 HLA-DOAP06340 250 aa20.75■□□□□ 0.91
TNPO2-201ENST00000356861 ACSBG1Q96GR2 724 aa20.75■□□□□ 0.91
TNPO2-201ENST00000356861 SGSM2O43147 1006 aa20.74■□□□□ 0.91
TNPO2-201ENST00000356861 LGR6Q9HBX8 967 aa20.74■□□□□ 0.91
TNPO2-201ENST00000356861 GNG11P61952 73 aa20.74■□□□□ 0.91
TNPO2-201ENST00000356861 TTC12Q9H892 705 aaPredicted RBP20.74■□□□□ 0.91
TNPO2-201ENST00000356861 PLXNC1O60486 1568 aa20.74■□□□□ 0.91
TNPO2-201ENST00000356861 PLBD2Q8NHP8 589 aa20.74■□□□□ 0.91
TNPO2-201ENST00000356861 HELLSQ9NRZ9 838 aa20.74■□□□□ 0.91
TNPO2-201ENST00000356861 RTL1A6NKG5 1358 aa20.74■□□□□ 0.91
TNPO2-201ENST00000356861 ENOX2Q16206 610 aaKnown RBP20.74■□□□□ 0.91
TNPO2-201ENST00000356861 TSPY3P0CV98 308 aa20.73■□□□□ 0.91
TNPO2-201ENST00000356861 TSPY8P0CW00 308 aa20.73■□□□□ 0.91
TNPO2-201ENST00000356861 CCDC40Q4G0X9 1142 aa20.73■□□□□ 0.91
TNPO2-201ENST00000356861 HELBQ8NG08 1087 aaPredicted RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms