RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 TRMT1LQ7Z2T5 733 aaKnown RBP6.32□□□□□ -1.4
PTPRD-202ENST00000356435 TMEM57Q8N5G2 664 aa6.32□□□□□ -1.4
PTPRD-202ENST00000356435 CLIP2Q9UDT6 1046 aa6.32□□□□□ -1.4
PTPRD-202ENST00000356435 IL16Q14005 1332 aa6.32□□□□□ -1.4
PTPRD-202ENST00000356435 GOLGA6L9A6NEM1 432 aa6.32□□□□□ -1.4
PTPRD-202ENST00000356435 NEMFO60524 1076 aa6.32□□□□□ -1.4
PTPRD-202ENST00000356435 KIF4BQ2VIQ3 1234 aa6.32□□□□□ -1.4
PTPRD-202ENST00000356435 FERMT3Q86UX7 667 aa6.32□□□□□ -1.4
PTPRD-202ENST00000356435 PUS7Q96PZ0 661 aaKnown RBP6.32□□□□□ -1.4
PTPRD-202ENST00000356435 SNX16P57768 344 aa6.32□□□□□ -1.4
PTPRD-202ENST00000356435 DHX37Q8IY37 1157 aaKnown RBP6.32□□□□□ -1.4
PTPRD-202ENST00000356435 LDHAL6AQ6ZMR3 332 aa6.31□□□□□ -1.4
PTPRD-202ENST00000356435 CFAP57Q96MR6 1250 aa6.31□□□□□ -1.4
PTPRD-202ENST00000356435 C8orf37Q96NL8 207 aa6.31□□□□□ -1.4
PTPRD-202ENST00000356435 SBNO2Q9Y2G9 1366 aa6.31□□□□□ -1.4
PTPRD-202ENST00000356435 PICALMQ13492 652 aa6.31□□□□□ -1.4
PTPRD-202ENST00000356435 CCDC14Q49A88 953 aa6.31□□□□□ -1.4
PTPRD-202ENST00000356435 NME9Q86XW9 330 aa6.31□□□□□ -1.4
PTPRD-202ENST00000356435 ANKRD24Q8TF21 1146 aa6.31□□□□□ -1.4
PTPRD-202ENST00000356435 TRIM47Q96LD4 638 aa6.31□□□□□ -1.4
PTPRD-202ENST00000356435 CCDC94Q9BW85 323 aaPredicted RBP6.31□□□□□ -1.4
PTPRD-202ENST00000356435 MRVI1Q9Y6F6 885 aa6.31□□□□□ -1.4
PTPRD-202ENST00000356435 NCOA3Q9Y6Q9 1424 aa6.31□□□□□ -1.4
PTPRD-202ENST00000356435 GNAQP50148 359 aa6.31□□□□□ -1.4
PTPRD-202ENST00000356435 KIAA0753Q2KHM9 967 aa6.31□□□□□ -1.4
PTPRD-202ENST00000356435 FOXO3O43524 673 aa6.31□□□□□ -1.4
PTPRD-202ENST00000356435 GSDMDP57764 484 aa6.31□□□□□ -1.4
PTPRD-202ENST00000356435 HLTFQ14527 1009 aaKnown RBP eCLIP6.31□□□□□ -1.4
PTPRD-202ENST00000356435 RBM17Q96I25 401 aaKnown RBP6.31□□□□□ -1.4
PTPRD-202ENST00000356435 DDX19AQ9NUU7 478 aaKnown RBP6.31□□□□□ -1.4
PTPRD-202ENST00000356435 ITSN2Q9NZM3 1697 aa6.31□□□□□ -1.4
PTPRD-202ENST00000356435 MAATS1Q7Z4T9 603 aa6.31□□□□□ -1.4
PTPRD-202ENST00000356435 ESR2Q92731 530 aa6.31□□□□□ -1.4
PTPRD-202ENST00000356435 RBM27Q9P2N5 1060 aaKnown RBP6.31□□□□□ -1.4
PTPRD-202ENST00000356435 WTAPQ15007 396 aa6.31□□□□□ -1.4
PTPRD-202ENST00000356435 STMN4Q9H169 189 aaPredicted RBP6.31□□□□□ -1.4
PTPRD-202ENST00000356435 ECHDC1Q9NTX5 307 aa6.31□□□□□ -1.4
PTPRD-202ENST00000356435 NOD1Q9Y239 953 aa6.31□□□□□ -1.4
PTPRD-202ENST00000356435 TNRQ92752 1358 aa6.31□□□□□ -1.4
PTPRD-202ENST00000356435 UQCRHLA0A096LP55 91 aa6.31□□□□□ -1.4
PTPRD-202ENST00000356435 UQCRHP07919 91 aa6.31□□□□□ -1.4
PTPRD-202ENST00000356435 NBPF7P0C2Y1 421 aaPredicted RBP6.31□□□□□ -1.4
PTPRD-202ENST00000356435 PTPN14Q15678 1187 aa6.31□□□□□ -1.4
PTPRD-202ENST00000356435 MICU3Q86XE3 530 aa6.31□□□□□ -1.4
PTPRD-202ENST00000356435 CCDC8Q9H0W5 538 aaPredicted RBP6.31□□□□□ -1.4
PTPRD-202ENST00000356435 LIMCH1Q9UPQ0 1083 aa6.31□□□□□ -1.4
PTPRD-202ENST00000356435 LAMC3Q9Y6N6 1575 aa6.31□□□□□ -1.4
PTPRD-202ENST00000356435 SPDYE3A6NKU9 549 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 ATP2A1O14983 1001 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 ZWINTO95229 277 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 SLC4A8Q2Y0W8 1093 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 HEATR3Q7Z4Q2 680 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 FSIP1Q8NA03 581 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 NAP1L4Q99733 375 aaKnown RBP6.3□□□□□ -1.4
PTPRD-202ENST00000356435 SLC26A6Q9BXS9 759 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 PANK2Q9BZ23 570 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 ANKRD2Q9GZV1 360 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 MMRN2Q9H8L6 949 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 ODF2LQ9ULJ1 636 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 DISP3Q9P2K9 1392 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 LAMC1P11047 1609 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 FAM13AO94988 1023 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 UVSSAQ2YD98 709 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 FAM107BQ9H098 131 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 TFCP2L1Q9NZI6 479 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 NPHP3Q7Z494 1330 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 ZFYP08048 801 aaPredicted RBP6.3□□□□□ -1.4
PTPRD-202ENST00000356435 HOOK2Q96ED9 719 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 SYCE3A1L190 88 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 IGHDP01880 384 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 CALM1P0DP23 149 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 CALM2P0DP24 149 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 CALM3P0DP25 149 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 STAT6P42226 847 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 CKAP4Q07065 602 aaKnown RBP6.3□□□□□ -1.4
PTPRD-202ENST00000356435 FLIIQ13045 1269 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 IFIT1BQ5T764 474 aaKnown RBP6.3□□□□□ -1.4
PTPRD-202ENST00000356435 RRP36Q96EU6 259 aaKnown RBP6.3□□□□□ -1.4
PTPRD-202ENST00000356435 CTAGE1Q96RT6 745 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 USP16Q9Y5T5 823 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 A0A1W2PRG0 241 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 F8W031 263 aaPredicted RBP6.3□□□□□ -1.4
PTPRD-202ENST00000356435 NAPAP54920 295 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 TMTC2Q8N394 836 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 NSRP1Q9H0G5 558 aaKnown RBP6.3□□□□□ -1.4
PTPRD-202ENST00000356435 STK32BQ9NY57 414 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 BCCIPQ9P287 314 aaKnown RBP eCLIP6.3□□□□□ -1.4
PTPRD-202ENST00000356435 ANAPC4Q9UJX5 808 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 STX8Q9UNK0 236 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 UBE3BQ7Z3V4 1068 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 NLRP3Q96P20 1036 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 ZBTB24O43167 697 aaPredicted RBP6.3□□□□□ -1.4
PTPRD-202ENST00000356435 SH3BP5O60239 455 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 SPECC1Q5M775 1068 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 WAPLQ7Z5K2 1190 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 CCDC155Q8N6L0 562 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 KIF18AQ8NI77 898 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 SPAG5Q96R06 1193 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 SLC4A4Q9Y6R1 1079 aa6.3□□□□□ -1.4
PTPRD-202ENST00000356435 WDR7Q9Y4E6 1490 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms