RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 JCADQ9P266 1359 aa16.74■□□□□ 0.27
LSS-201ENST00000356396 IL6STP40189 918 aaPredicted RBP16.74■□□□□ 0.27
LSS-201ENST00000356396 PAG1Q9NWQ8 432 aa16.74■□□□□ 0.27
LSS-201ENST00000356396 AHDC1Q5TGY3 1603 aaPredicted RBP16.73■□□□□ 0.27
LSS-201ENST00000356396 FAM173BQ6P4H8 233 aa16.73■□□□□ 0.27
LSS-201ENST00000356396 CELF1Q92879 486 aaKnown RBP16.73■□□□□ 0.27
LSS-201ENST00000356396 MCAMP43121 646 aa16.73■□□□□ 0.27
LSS-201ENST00000356396 ATP2B3Q16720 1220 aa16.73■□□□□ 0.27
LSS-201ENST00000356396 MSL1Q68DK7 614 aa16.73■□□□□ 0.27
LSS-201ENST00000356396 MCTP1Q6DN14 999 aa16.73■□□□□ 0.27
LSS-201ENST00000356396 TEX13AQ9BXU3 409 aaPredicted RBP16.73■□□□□ 0.27
LSS-201ENST00000356396 M0R2C6 588 aa16.72■□□□□ 0.27
LSS-201ENST00000356396 GYG1P46976 350 aa16.72■□□□□ 0.27
LSS-201ENST00000356396 OLFM4Q6UX06 510 aa16.72■□□□□ 0.27
LSS-201ENST00000356396 VSIG10Q8N0Z9 540 aa16.72■□□□□ 0.27
LSS-201ENST00000356396 ARHGEF1Q92888 912 aaKnown RBP16.72■□□□□ 0.27
LSS-201ENST00000356396 OSBP2Q969R2 916 aa16.72■□□□□ 0.27
LSS-201ENST00000356396 MPHOSPH8Q99549 860 aa16.72■□□□□ 0.27
LSS-201ENST00000356396 PUS7LQ9H0K6 701 aaKnown RBP16.72■□□□□ 0.27
LSS-201ENST00000356396 BCL2L12Q9HB09 334 aa16.72■□□□□ 0.27
LSS-201ENST00000356396 TFCP2L1Q9NZI6 479 aa16.72■□□□□ 0.27
LSS-201ENST00000356396 CHMP5Q9NZZ3 219 aa16.72■□□□□ 0.27
LSS-201ENST00000356396 TTC41PQ6P2S7 1318 aa16.72■□□□□ 0.27
LSS-201ENST00000356396 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.72■□□□□ 0.27
LSS-201ENST00000356396 ANKRD18BA2A2Z9 1011 aa16.72■□□□□ 0.27
LSS-201ENST00000356396 ST18O60284 1047 aa16.72■□□□□ 0.27
LSS-201ENST00000356396 ZNF609O15014 1411 aa16.72■□□□□ 0.27
LSS-201ENST00000356396 RAD50Q92878 1312 aa16.71■□□□□ 0.27
LSS-201ENST00000356396 HSPA4P34932 840 aa16.71■□□□□ 0.27
LSS-201ENST00000356396 CREB3L3Q68CJ9 461 aa16.71■□□□□ 0.27
LSS-201ENST00000356396 IL15P40933 162 aaPredicted RBP16.71■□□□□ 0.27
LSS-201ENST00000356396 RUFY3Q7L099 469 aa16.71■□□□□ 0.27
LSS-201ENST00000356396 ZNF34Q8IZ26 560 aa16.71■□□□□ 0.27
LSS-201ENST00000356396 FNBP4Q8N3X1 1017 aaPredicted RBP16.71■□□□□ 0.27
LSS-201ENST00000356396 UTP14AQ9BVJ6 771 aaKnown RBP16.71■□□□□ 0.27
LSS-201ENST00000356396 ZNF219Q9P2Y4 722 aaPredicted RBP16.71■□□□□ 0.27
LSS-201ENST00000356396 CCDC171Q6TFL3 1326 aa16.71■□□□□ 0.26
LSS-201ENST00000356396 FERMT3Q86UX7 667 aa16.71■□□□□ 0.26
LSS-201ENST00000356396 MIGA1Q8NAN2 632 aa16.71■□□□□ 0.26
LSS-201ENST00000356396 ABCF2Q9UG63 623 aa16.71■□□□□ 0.26
LSS-201ENST00000356396 SH3TC1Q8TE82 1336 aa16.7■□□□□ 0.26
LSS-201ENST00000356396 ZDHHC9Q9Y397 364 aa16.7■□□□□ 0.26
LSS-201ENST00000356396 RIPOR2Q9Y4F9 1068 aa16.7■□□□□ 0.26
LSS-201ENST00000356396 MCM4P33991 863 aa16.7■□□□□ 0.26
LSS-201ENST00000356396 EVX2Q03828 476 aa16.7■□□□□ 0.26
LSS-201ENST00000356396 BARGINQ6ZT62 677 aa16.7■□□□□ 0.26
LSS-201ENST00000356396 SLC27A2O14975 620 aa16.69■□□□□ 0.26
LSS-201ENST00000356396 APPP05067 770 aa16.69■□□□□ 0.26
LSS-201ENST00000356396 ATP5JP18859 108 aa16.69■□□□□ 0.26
LSS-201ENST00000356396 MCCP23508 829 aa16.69■□□□□ 0.26
LSS-201ENST00000356396 THRAP3Q9Y2W1 955 aaKnown RBP16.69■□□□□ 0.26
LSS-201ENST00000356396 PDE8AO60658 829 aa16.68■□□□□ 0.26
LSS-201ENST00000356396 RXRAP19793 462 aa16.68■□□□□ 0.26
LSS-201ENST00000356396 SNX21Q969T3 373 aa16.68■□□□□ 0.26
LSS-201ENST00000356396 PIH1D3Q9NQM4 214 aaKnown RBP16.68■□□□□ 0.26
LSS-201ENST00000356396 ERBB4Q15303 1308 aa16.68■□□□□ 0.26
LSS-201ENST00000356396 STOX1Q6ZVD7 989 aa16.68■□□□□ 0.26
LSS-201ENST00000356396 DDX11Q96FC9 970 aa16.68■□□□□ 0.26
LSS-201ENST00000356396 NSFL1CQ9UNZ2 370 aaKnown RBP16.68■□□□□ 0.26
LSS-201ENST00000356396 NTSR2O95665 410 aa16.68■□□□□ 0.26
LSS-201ENST00000356396 CYP2E1P05181 493 aaPredicted RBP16.68■□□□□ 0.26
LSS-201ENST00000356396 CYP21A2P08686 494 aa16.68■□□□□ 0.26
LSS-201ENST00000356396 NBPF5PQ86XG9 351 aaPredicted RBP16.68■□□□□ 0.26
LSS-201ENST00000356396 HDAC5Q9UQL6 1122 aa16.68■□□□□ 0.26
LSS-201ENST00000356396 ABCC12Q96J65 1359 aa16.68■□□□□ 0.26
LSS-201ENST00000356396 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.67■□□□□ 0.26
LSS-201ENST00000356396 CSF1RP07333 972 aa16.67■□□□□ 0.26
LSS-201ENST00000356396 CCDC102BQ68D86 513 aa16.67■□□□□ 0.26
LSS-201ENST00000356396 TXNRD3Q86VQ6 643 aa16.67■□□□□ 0.26
LSS-201ENST00000356396 HAUS7Q99871 368 aa16.67■□□□□ 0.26
LSS-201ENST00000356396 RBM27Q9P2N5 1060 aaKnown RBP16.67■□□□□ 0.26
LSS-201ENST00000356396 BRPF3Q9ULD4 1205 aa16.67■□□□□ 0.26
LSS-201ENST00000356396 UBR2Q8IWV8 1755 aa16.67■□□□□ 0.26
LSS-201ENST00000356396 ZPR1O75312 459 aa16.67■□□□□ 0.26
LSS-201ENST00000356396 CCT2P78371 535 aaKnown RBP16.67■□□□□ 0.26
LSS-201ENST00000356396 CCDC158Q5M9N0 1113 aa16.66■□□□□ 0.26
LSS-201ENST00000356396 SLC9C2Q5TAH2 1124 aa16.66■□□□□ 0.26
LSS-201ENST00000356396 NCOA5Q9HCD5 579 aaKnown RBP16.66■□□□□ 0.26
LSS-201ENST00000356396 PRKAB2O43741 272 aa16.66■□□□□ 0.26
LSS-201ENST00000356396 TPCN1Q9ULQ1 816 aa16.66■□□□□ 0.26
LSS-201ENST00000356396 CHAF1AQ13111 956 aaPredicted RBP16.65■□□□□ 0.26
LSS-201ENST00000356396 NECTIN1Q15223 517 aa16.65■□□□□ 0.26
LSS-201ENST00000356396 ME3Q16798 604 aa16.65■□□□□ 0.26
LSS-201ENST00000356396 PDGFDQ9GZP0 370 aaPredicted RBP16.65■□□□□ 0.26
LSS-201ENST00000356396 PDRG1Q9NUG6 133 aa16.65■□□□□ 0.26
LSS-201ENST00000356396 MAST3O60307 1309 aa16.65■□□□□ 0.26
LSS-201ENST00000356396 RFC4P35249 363 aa16.65■□□□□ 0.26
LSS-201ENST00000356396 FGD1P98174 961 aa16.65■□□□□ 0.26
LSS-201ENST00000356396 CHRNDQ07001 517 aa16.65■□□□□ 0.26
LSS-201ENST00000356396 KBTBD3Q8NAB2 608 aa16.65■□□□□ 0.26
LSS-201ENST00000356396 RTCBQ9Y3I0 505 aaKnown RBP16.65■□□□□ 0.26
LSS-201ENST00000356396 TJP1Q07157 1748 aa16.65■□□□□ 0.26
LSS-201ENST00000356396 PRPF40AO75400 957 aaKnown RBP16.65■□□□□ 0.26
LSS-201ENST00000356396 PDE8BO95263 885 aa16.65■□□□□ 0.26
LSS-201ENST00000356396 ST3GAL1Q11201 340 aa16.65■□□□□ 0.26
LSS-201ENST00000356396 CCDC144CPQ8IYA2 1237 aa16.65■□□□□ 0.26
LSS-201ENST00000356396 RASGRF1Q13972 1273 aa16.64■□□□□ 0.25
LSS-201ENST00000356396 GJB4Q9NTQ9 266 aa16.64■□□□□ 0.25
LSS-201ENST00000356396 TRAK2O60296 914 aa16.64■□□□□ 0.25
LSS-201ENST00000356396 JAK2O60674 1132 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms