RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 PDE4CQ08493 712 aa17.84■□□□□ 0.45
VAT1-201ENST00000355653 TEFQ10587 303 aa17.84■□□□□ 0.45
VAT1-201ENST00000355653 SCRN1Q12765 414 aa17.84■□□□□ 0.45
VAT1-201ENST00000355653 GORABQ5T7V8 394 aa17.84■□□□□ 0.45
VAT1-201ENST00000355653 SYT10Q6XYQ8 523 aa17.84■□□□□ 0.45
VAT1-201ENST00000355653 CCDC129Q6ZRS4 1044 aa17.84■□□□□ 0.45
VAT1-201ENST00000355653 SMC2O95347 1197 aa17.83■□□□□ 0.45
VAT1-201ENST00000355653 CDK11BP21127 795 aaKnown RBP17.83■□□□□ 0.45
VAT1-201ENST00000355653 USP28Q96RU2 1077 aa17.83■□□□□ 0.45
VAT1-201ENST00000355653 ALDH8A1Q9H2A2 487 aaPredicted RBP17.83■□□□□ 0.45
VAT1-201ENST00000355653 TBX22Q9Y458 520 aa17.83■□□□□ 0.45
VAT1-201ENST00000355653 AIMP1Q12904 312 aaKnown RBP17.83■□□□□ 0.44
VAT1-201ENST00000355653 FSIP1Q8NA03 581 aa17.83■□□□□ 0.44
VAT1-201ENST00000355653 FMNL2Q96PY5 1086 aa17.82■□□□□ 0.44
VAT1-201ENST00000355653 DBF4Q9UBU7 674 aaPredicted RBP17.82■□□□□ 0.44
VAT1-201ENST00000355653 KRT32Q14532 448 aa17.82■□□□□ 0.44
VAT1-201ENST00000355653 NOL10Q9BSC4 688 aaKnown RBP17.82■□□□□ 0.44
VAT1-201ENST00000355653 VGLL3A8MV65 326 aa17.81■□□□□ 0.44
VAT1-201ENST00000355653 ADD1P35611 737 aaKnown RBP17.81■□□□□ 0.44
VAT1-201ENST00000355653 MPRIPQ6WCQ1 1025 aa17.81■□□□□ 0.44
VAT1-201ENST00000355653 TMC6Q7Z403 805 aa17.81■□□□□ 0.44
VAT1-201ENST00000355653 TIGD1Q96MW7 591 aa17.81■□□□□ 0.44
VAT1-201ENST00000355653 SDF4Q9BRK5 362 aa17.81■□□□□ 0.44
VAT1-201ENST00000355653 SNRKQ9NRH2 765 aa17.81■□□□□ 0.44
VAT1-201ENST00000355653 GSDMDP57764 484 aa17.81■□□□□ 0.44
VAT1-201ENST00000355653 CCT2P78371 535 aaKnown RBP17.81■□□□□ 0.44
VAT1-201ENST00000355653 FAM160A1Q05DH4 1040 aa17.81■□□□□ 0.44
VAT1-201ENST00000355653 ZRSR1Q15695 479 aaKnown RBP17.81■□□□□ 0.44
VAT1-201ENST00000355653 SLFNL1Q499Z3 407 aa17.81■□□□□ 0.44
VAT1-201ENST00000355653 E4F1Q66K89 784 aaPredicted RBP17.81■□□□□ 0.44
VAT1-201ENST00000355653 NBPF11Q86T75 865 aa17.81■□□□□ 0.44
VAT1-201ENST00000355653 SEC62Q99442 399 aaKnown RBP17.81■□□□□ 0.44
VAT1-201ENST00000355653 NAT10Q9H0A0 1025 aaKnown RBP17.81■□□□□ 0.44
VAT1-201ENST00000355653 ALDH1L1O75891 902 aa17.8■□□□□ 0.44
VAT1-201ENST00000355653 KCNA6P17658 529 aa17.8■□□□□ 0.44
VAT1-201ENST00000355653 IRX5P78411 483 aaPredicted RBP17.8■□□□□ 0.44
VAT1-201ENST00000355653 PPP1R13BQ96KQ4 1090 aa17.8■□□□□ 0.44
VAT1-201ENST00000355653 TRERF1Q96PN7 1200 aa17.8■□□□□ 0.44
VAT1-201ENST00000355653 FAM53CQ9NYF3 392 aa17.8■□□□□ 0.44
VAT1-201ENST00000355653 RCOR1Q9UKL0 485 aa17.8■□□□□ 0.44
VAT1-201ENST00000355653 CCDC9Q9Y3X0 531 aaKnown RBP17.8■□□□□ 0.44
VAT1-201ENST00000355653 PRAMEF22A3QJZ6 481 aa17.8■□□□□ 0.44
VAT1-201ENST00000355653 GRM8O00222 908 aa17.8■□□□□ 0.44
VAT1-201ENST00000355653 KSR2Q6VAB6 950 aa17.8■□□□□ 0.44
VAT1-201ENST00000355653 RBM33Q96EV2 1170 aaKnown RBP17.8■□□□□ 0.44
VAT1-201ENST00000355653 KAZALD1Q96I82 304 aa17.8■□□□□ 0.44
VAT1-201ENST00000355653 DNAJC2Q99543 621 aaKnown RBP17.8■□□□□ 0.44
VAT1-201ENST00000355653 RGPD8O14715 1765 aaPredicted RBP17.8■□□□□ 0.44
VAT1-201ENST00000355653 KIF2AO00139 706 aaPredicted RBP17.79■□□□□ 0.44
VAT1-201ENST00000355653 BMS1Q14692 1282 aaKnown RBP17.79■□□□□ 0.44
VAT1-201ENST00000355653 HOMER1Q86YM7 354 aa17.79■□□□□ 0.44
VAT1-201ENST00000355653 IFNKQ9P0W0 207 aa17.79■□□□□ 0.44
VAT1-201ENST00000355653 COL15A1P39059 1388 aa17.79■□□□□ 0.44
VAT1-201ENST00000355653 PTPDC1A2A3K4 754 aa17.79■□□□□ 0.44
VAT1-201ENST00000355653 CYP21A2P08686 494 aa17.79■□□□□ 0.44
VAT1-201ENST00000355653 HOXB7P09629 217 aa17.79■□□□□ 0.44
VAT1-201ENST00000355653 CLCN6P51797 869 aa17.79■□□□□ 0.44
VAT1-201ENST00000355653 MAPK8IP2Q13387 824 aaPredicted RBP17.79■□□□□ 0.44
VAT1-201ENST00000355653 TSGA10IPQ3SY00 556 aa17.79■□□□□ 0.44
VAT1-201ENST00000355653 ARHGAP29Q52LW3 1261 aa17.79■□□□□ 0.44
VAT1-201ENST00000355653 XPO4Q9C0E2 1151 aaKnown RBP17.79■□□□□ 0.44
VAT1-201ENST00000355653 NCOA5Q9HCD5 579 aaKnown RBP17.79■□□□□ 0.44
VAT1-201ENST00000355653 NWD1Q149M9 1564 aa17.79■□□□□ 0.44
VAT1-201ENST00000355653 A0A1B0GVL5 298 aa17.78■□□□□ 0.44
VAT1-201ENST00000355653 BIN1O00499 593 aa17.78■□□□□ 0.44
VAT1-201ENST00000355653 APOBRQ0VD83 1088 aa17.78■□□□□ 0.44
VAT1-201ENST00000355653 CEMIPQ8WUJ3 1361 aa17.78■□□□□ 0.44
VAT1-201ENST00000355653 PIK3C2AO00443 1686 aa17.78■□□□□ 0.44
VAT1-201ENST00000355653 SFPQP23246 707 aaKnown RBP eCLIP17.78■□□□□ 0.44
VAT1-201ENST00000355653 ARMCX5Q6P1M9 558 aa17.78■□□□□ 0.44
VAT1-201ENST00000355653 ENGASEQ8NFI3 743 aa17.78■□□□□ 0.44
VAT1-201ENST00000355653 HDAC5Q9UQL6 1122 aa17.78■□□□□ 0.44
VAT1-201ENST00000355653 DIP2AQ14689 1571 aa17.78■□□□□ 0.44
VAT1-201ENST00000355653 DPCR1Q3MIW9 517 aa17.78■□□□□ 0.44
VAT1-201ENST00000355653 NSUN7Q8NE18 718 aaKnown RBP17.78■□□□□ 0.44
VAT1-201ENST00000355653 CHMP4AQ9BY43 222 aa17.78■□□□□ 0.44
VAT1-201ENST00000355653 H2AFXP16104 143 aaPredicted RBP17.77■□□□□ 0.44
VAT1-201ENST00000355653 ZNF396Q96N95 335 aaPredicted RBP17.77■□□□□ 0.44
VAT1-201ENST00000355653 FHOD1Q9Y613 1164 aa17.77■□□□□ 0.44
VAT1-201ENST00000355653 NBPF6Q5VWK0 638 aa17.77■□□□□ 0.43
VAT1-201ENST00000355653 USPL1Q5W0Q7 1092 aa17.77■□□□□ 0.43
VAT1-201ENST00000355653 ZNF530Q6P9A1 599 aaPredicted RBP17.77■□□□□ 0.43
VAT1-201ENST00000355653 NBPF4Q96M43 638 aa17.77■□□□□ 0.43
VAT1-201ENST00000355653 CALCOCO1Q9P1Z2 691 aa17.77■□□□□ 0.43
VAT1-201ENST00000355653 NAA16Q6N069 864 aaPredicted RBP17.76■□□□□ 0.43
VAT1-201ENST00000355653 SMARCC2Q8TAQ2 1214 aa17.76■□□□□ 0.43
VAT1-201ENST00000355653 OSBPL5Q9H0X9 879 aaPredicted RBP17.76■□□□□ 0.43
VAT1-201ENST00000355653 L2HGDHQ9H9P8 463 aa17.76■□□□□ 0.43
VAT1-201ENST00000355653 CTDNEP1O95476 244 aa17.76■□□□□ 0.43
VAT1-201ENST00000355653 DNAI1Q9UI46 699 aa17.76■□□□□ 0.43
VAT1-201ENST00000355653 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.76■□□□□ 0.43
VAT1-201ENST00000355653 SETD1BQ9UPS6 1966 aaKnown RBP17.75■□□□□ 0.43
VAT1-201ENST00000355653 POLR3GO15318 223 aaPredicted RBP17.75■□□□□ 0.43
VAT1-201ENST00000355653 PNMA6AP0CW24 399 aaPredicted RBP17.75■□□□□ 0.43
VAT1-201ENST00000355653 STOX1Q6ZVD7 989 aa17.75■□□□□ 0.43
VAT1-201ENST00000355653 LINS1Q8NG48 757 aa17.75■□□□□ 0.43
VAT1-201ENST00000355653 MRPS27Q92552 414 aaKnown RBP17.75■□□□□ 0.43
VAT1-201ENST00000355653 IMPACTQ9P2X3 320 aa17.75■□□□□ 0.43
VAT1-201ENST00000355653 PCDHA7Q9UN72 937 aa17.75■□□□□ 0.43
VAT1-201ENST00000355653 U3KPZ7 1027 aaPredicted RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms