RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 SNRKQ9NRH2 765 aa27.67■■■□□ 2.02
SCAMP3-202ENST00000355379 ATP2B3Q16720 1220 aa27.65■■■□□ 2.02
SCAMP3-202ENST00000355379 CCDC158Q5M9N0 1113 aa27.65■■■□□ 2.02
SCAMP3-202ENST00000355379 XAGE2Q96GT9 111 aa27.65■■■□□ 2.02
SCAMP3-202ENST00000355379 PDE8BO95263 885 aa27.64■■■□□ 2.02
SCAMP3-202ENST00000355379 KIAA1211Q6ZU35 1233 aa27.64■■■□□ 2.02
SCAMP3-202ENST00000355379 LSG1Q9H089 658 aaKnown RBP27.64■■■□□ 2.02
SCAMP3-202ENST00000355379 BICDL1Q6ZP65 573 aa27.63■■■□□ 2.01
SCAMP3-202ENST00000355379 PLSCR1O15162 318 aa27.62■■■□□ 2.01
SCAMP3-202ENST00000355379 IFIT1P09914 478 aaKnown RBP27.62■■■□□ 2.01
SCAMP3-202ENST00000355379 SSFA2P28290 1259 aa27.62■■■□□ 2.01
SCAMP3-202ENST00000355379 IL27Q8NEV9 243 aa27.62■■■□□ 2.01
SCAMP3-202ENST00000355379 MPHOSPH8Q99549 860 aa27.62■■■□□ 2.01
SCAMP3-202ENST00000355379 SEC31BQ9NQW1 1179 aa27.62■■■□□ 2.01
SCAMP3-202ENST00000355379 GTF2E1P29083 439 aaPredicted RBP27.62■■■□□ 2.01
SCAMP3-202ENST00000355379 IGHMBP2P38935 993 aaKnown RBP27.62■■■□□ 2.01
SCAMP3-202ENST00000355379 NMIQ13287 307 aaPredicted RBP27.62■■■□□ 2.01
SCAMP3-202ENST00000355379 GORABQ5T7V8 394 aa27.62■■■□□ 2.01
SCAMP3-202ENST00000355379 TPTE2Q6XPS3 522 aa27.62■■■□□ 2.01
SCAMP3-202ENST00000355379 KBTBD3Q8NAB2 608 aa27.62■■■□□ 2.01
SCAMP3-202ENST00000355379 ZNF512BQ96KM6 892 aaPredicted RBP27.62■■■□□ 2.01
SCAMP3-202ENST00000355379 CDC5LQ99459 802 aaKnown RBP27.62■■■□□ 2.01
SCAMP3-202ENST00000355379 DNAJC2Q99543 621 aaKnown RBP27.62■■■□□ 2.01
SCAMP3-202ENST00000355379 HSPA4P34932 840 aa27.61■■■□□ 2.01
SCAMP3-202ENST00000355379 TXNRD1Q16881 649 aa27.61■■■□□ 2.01
SCAMP3-202ENST00000355379 TTC39AQ5SRH9 613 aa27.61■■■□□ 2.01
SCAMP3-202ENST00000355379 NBPF5PQ86XG9 351 aaPredicted RBP27.61■■■□□ 2.01
SCAMP3-202ENST00000355379 PAG1Q9NWQ8 432 aa27.61■■■□□ 2.01
SCAMP3-202ENST00000355379 A0A1B0GUL6 1792 aa27.6■■■□□ 2.01
SCAMP3-202ENST00000355379 PHF14O94880 888 aa27.6■■■□□ 2.01
SCAMP3-202ENST00000355379 ADORA1P30542 326 aa27.6■■■□□ 2.01
SCAMP3-202ENST00000355379 EDC3Q96F86 508 aaKnown RBP27.6■■■□□ 2.01
SCAMP3-202ENST00000355379 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.59■■■□□ 2.01
SCAMP3-202ENST00000355379 FGFR2P21802 821 aa27.59■■■□□ 2.01
SCAMP3-202ENST00000355379 PUM3Q15397 648 aaKnown RBP27.59■■■□□ 2.01
SCAMP3-202ENST00000355379 CARMIL3Q8ND23 1372 aa27.58■■■□□ 2.01
SCAMP3-202ENST00000355379 RGPD3A6NKT7 1758 aaPredicted RBP27.58■■■□□ 2.01
SCAMP3-202ENST00000355379 RGPD4Q7Z3J3 1758 aa27.58■■■□□ 2.01
SCAMP3-202ENST00000355379 LPIN2Q92539 896 aa27.58■■■□□ 2.01
SCAMP3-202ENST00000355379 FAM227BQ96M60 508 aa27.58■■■□□ 2.01
SCAMP3-202ENST00000355379 MED23Q9ULK4 1368 aa27.58■■■□□ 2.01
SCAMP3-202ENST00000355379 PROM2Q8N271 834 aa27.57■■■□□ 2
SCAMP3-202ENST00000355379 AKAP11Q9UKA4 1901 aa27.57■■■□□ 2
SCAMP3-202ENST00000355379 TNS1Q9HBL0 1735 aaKnown RBP27.57■■■□□ 2
SCAMP3-202ENST00000355379 NLRP3Q96P20 1036 aa27.57■■■□□ 2
SCAMP3-202ENST00000355379 A0A0D9SFI3 127 aa27.56■■■□□ 2
SCAMP3-202ENST00000355379 C3orf67Q6ZVT6 689 aa27.56■■■□□ 2
SCAMP3-202ENST00000355379 DDX46Q7L014 1031 aaKnown RBP27.56■■■□□ 2
SCAMP3-202ENST00000355379 K7ELQ4 463 aaPredicted RBP27.55■■■□□ 2
SCAMP3-202ENST00000355379 GOLIM4O00461 696 aa27.55■■■□□ 2
SCAMP3-202ENST00000355379 ANKRD18AQ8IVF6 992 aa27.55■■■□□ 2
SCAMP3-202ENST00000355379 FBXO41Q8TF61 875 aa27.55■■■□□ 2
SCAMP3-202ENST00000355379 PALD1Q9ULE6 856 aa27.55■■■□□ 2
SCAMP3-202ENST00000355379 NDUFB9Q9Y6M9 179 aa27.55■■■□□ 2
SCAMP3-202ENST00000355379 CCDC171Q6TFL3 1326 aa27.55■■■□□ 2
SCAMP3-202ENST00000355379 ST18O60284 1047 aa27.54■■■□□ 2
SCAMP3-202ENST00000355379 SLC5A1P13866 664 aa27.54■■■□□ 2
SCAMP3-202ENST00000355379 NFIXQ14938 502 aa27.54■■■□□ 2
SCAMP3-202ENST00000355379 MYH7P12883 1935 aa27.54■■■□□ 2
SCAMP3-202ENST00000355379 LRRFIP1Q32MZ4 808 aaKnown RBP27.53■■■□□ 2
SCAMP3-202ENST00000355379 RGS17Q9UGC6 210 aaPredicted RBP27.53■■■□□ 2
SCAMP3-202ENST00000355379 COL4A1P02462 1669 aa27.53■■■□□ 2
SCAMP3-202ENST00000355379 TAF1P21675 1872 aa27.53■■■□□ 2
SCAMP3-202ENST00000355379 CD2BP2O95400 341 aaKnown RBP27.52■■■□□ 2
SCAMP3-202ENST00000355379 APBA3O96018 575 aa27.52■■■□□ 2
SCAMP3-202ENST00000355379 UQCRFS1P1P0C7P4 283 aa27.52■■■□□ 2
SCAMP3-202ENST00000355379 GYS1P13807 737 aa27.52■■■□□ 2
SCAMP3-202ENST00000355379 PTH1RQ03431 593 aa27.52■■■□□ 2
SCAMP3-202ENST00000355379 MAP4K1Q92918 833 aa27.52■■■□□ 2
SCAMP3-202ENST00000355379 KCNB2Q92953 911 aa27.52■■■□□ 2
SCAMP3-202ENST00000355379 BSDC1Q9NW68 430 aaPredicted RBP27.52■■■□□ 2
SCAMP3-202ENST00000355379 ARID4AP29374 1257 aaPredicted RBP27.51■■■□□ 2
SCAMP3-202ENST00000355379 HELLSQ9NRZ9 838 aa27.51■■■□□ 2
SCAMP3-202ENST00000355379 HELBQ8NG08 1087 aaPredicted RBP27.51■■□□□ 1.99
SCAMP3-202ENST00000355379 ANTXR1Q9H6X2 564 aa27.51■■□□□ 1.99
SCAMP3-202ENST00000355379 TNRC6CQ9HCJ0 1690 aaKnown RBP27.51■■□□□ 1.99
SCAMP3-202ENST00000355379 CHRNDQ07001 517 aa27.5■■□□□ 1.99
SCAMP3-202ENST00000355379 MCMDC2Q4G0Z9 681 aa27.5■■□□□ 1.99
SCAMP3-202ENST00000355379 ANP32EQ9BTT0 268 aa27.5■■□□□ 1.99
SCAMP3-202ENST00000355379 SCARF1Q14162 830 aa27.49■■□□□ 1.99
SCAMP3-202ENST00000355379 NECTIN1Q15223 517 aa27.49■■□□□ 1.99
SCAMP3-202ENST00000355379 CCDC102BQ68D86 513 aa27.49■■□□□ 1.99
SCAMP3-202ENST00000355379 SNX14Q9Y5W7 946 aa27.49■■□□□ 1.99
SCAMP3-202ENST00000355379 RNF113AO15541 343 aaKnown RBP27.48■■□□□ 1.99
SCAMP3-202ENST00000355379 ZFYP08048 801 aaPredicted RBP27.48■■□□□ 1.99
SCAMP3-202ENST00000355379 TM4SF1P30408 202 aa27.48■■□□□ 1.99
SCAMP3-202ENST00000355379 MCM2P49736 904 aa27.48■■□□□ 1.99
SCAMP3-202ENST00000355379 FKBP4Q02790 459 aaKnown RBP eCLIP27.48■■□□□ 1.99
SCAMP3-202ENST00000355379 ZMYM1Q5SVZ6 1142 aa27.48■■□□□ 1.99
SCAMP3-202ENST00000355379 TAF5LO75529 589 aa27.47■■□□□ 1.99
SCAMP3-202ENST00000355379 MCAMP43121 646 aa27.47■■□□□ 1.99
SCAMP3-202ENST00000355379 ZAP70P43403 619 aa27.47■■□□□ 1.99
SCAMP3-202ENST00000355379 POTEAQ6S8J7 498 aa27.47■■□□□ 1.99
SCAMP3-202ENST00000355379 AKT1S1Q96B36 256 aa27.47■■□□□ 1.99
SCAMP3-202ENST00000355379 TTF1Q15361 905 aaPredicted RBP27.46■■□□□ 1.99
SCAMP3-202ENST00000355379 ZNF589Q86UQ0 364 aaPredicted RBP27.46■■□□□ 1.99
SCAMP3-202ENST00000355379 CNBD1Q8NA66 436 aa27.46■■□□□ 1.99
SCAMP3-202ENST00000355379 RBM8AQ9Y5S9 174 aaKnown RBP27.46■■□□□ 1.99
SCAMP3-202ENST00000355379 PHKA1P46020 1223 aa27.46■■□□□ 1.99
SCAMP3-202ENST00000355379 NEK4P51957 841 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms