RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 TM6SF1Q9BZW5 370 aa20.81■□□□□ 0.92
VPS13B-201ENST00000355155 ST18O60284 1047 aa20.81■□□□□ 0.92
VPS13B-201ENST00000355155 TSGA10IPQ3SY00 556 aa20.81■□□□□ 0.92
VPS13B-201ENST00000355155 TAF7LQ5H9L4 462 aa20.81■□□□□ 0.92
VPS13B-201ENST00000355155 USPL1Q5W0Q7 1092 aa20.81■□□□□ 0.92
VPS13B-201ENST00000355155 TNS1Q9HBL0 1735 aaKnown RBP20.81■□□□□ 0.92
VPS13B-201ENST00000355155 TIMM10P62072 90 aa20.8■□□□□ 0.92
VPS13B-201ENST00000355155 NECTIN1Q15223 517 aa20.8■□□□□ 0.92
VPS13B-201ENST00000355155 CWC27Q6UX04 472 aaKnown RBP20.8■□□□□ 0.92
VPS13B-201ENST00000355155 XAGE2Q96GT9 111 aa20.8■□□□□ 0.92
VPS13B-201ENST00000355155 FSD1Q9BTV5 496 aa20.8■□□□□ 0.92
VPS13B-201ENST00000355155 PALD1Q9ULE6 856 aa20.8■□□□□ 0.92
VPS13B-201ENST00000355155 COL4A1P02462 1669 aa20.79■□□□□ 0.92
VPS13B-201ENST00000355155 HELLSQ9NRZ9 838 aa20.79■□□□□ 0.92
VPS13B-201ENST00000355155 KIAA1211Q6ZU35 1233 aa20.79■□□□□ 0.92
VPS13B-201ENST00000355155 PAG1Q9NWQ8 432 aa20.79■□□□□ 0.92
VPS13B-201ENST00000355155 ARID4AP29374 1257 aaPredicted RBP20.78■□□□□ 0.92
VPS13B-201ENST00000355155 ATP2B3Q16720 1220 aa20.78■□□□□ 0.92
VPS13B-201ENST00000355155 CCDC158Q5M9N0 1113 aa20.78■□□□□ 0.92
VPS13B-201ENST00000355155 TBC1D9BQ66K14 1250 aa20.78■□□□□ 0.92
VPS13B-201ENST00000355155 CHMP5Q9NZZ3 219 aa20.78■□□□□ 0.92
VPS13B-201ENST00000355155 NRXN2Q9P2S2 1712 aa20.78■□□□□ 0.92
VPS13B-201ENST00000355155 A0A0D9SFI3 127 aa20.77■□□□□ 0.92
VPS13B-201ENST00000355155 GNPATO15228 680 aa20.77■□□□□ 0.92
VPS13B-201ENST00000355155 METTL24Q5JXM2 366 aa20.77■□□□□ 0.92
VPS13B-201ENST00000355155 ARHGEF1Q92888 912 aaKnown RBP20.77■□□□□ 0.92
VPS13B-201ENST00000355155 SNX14Q9Y5W7 946 aa20.77■□□□□ 0.92
VPS13B-201ENST00000355155 TNRC6CQ9HCJ0 1690 aaKnown RBP20.77■□□□□ 0.92
VPS13B-201ENST00000355155 PUM3Q15397 648 aaKnown RBP20.77■□□□□ 0.92
VPS13B-201ENST00000355155 LPIN2Q92539 896 aa20.77■□□□□ 0.92
VPS13B-201ENST00000355155 FAM227BQ96M60 508 aa20.77■□□□□ 0.92
VPS13B-201ENST00000355155 LRRC4BQ9NT99 713 aa20.77■□□□□ 0.92
VPS13B-201ENST00000355155 HCLS1P14317 486 aaPredicted RBP20.77■□□□□ 0.91
VPS13B-201ENST00000355155 SSFA2P28290 1259 aa20.77■□□□□ 0.91
VPS13B-201ENST00000355155 RPAP1Q9BWH6 1393 aaPredicted RBP20.76■□□□□ 0.91
VPS13B-201ENST00000355155 IFIT1P09914 478 aaKnown RBP20.76■□□□□ 0.91
VPS13B-201ENST00000355155 PTH1RQ03431 593 aa20.76■□□□□ 0.91
VPS13B-201ENST00000355155 ZMYM1Q5SVZ6 1142 aa20.76■□□□□ 0.91
VPS13B-201ENST00000355155 NEUROD6Q96NK8 337 aa20.76■□□□□ 0.91
VPS13B-201ENST00000355155 ALDH8A1Q9H2A2 487 aaPredicted RBP20.76■□□□□ 0.91
VPS13B-201ENST00000355155 CNNM1Q9NRU3 951 aa20.76■□□□□ 0.91
VPS13B-201ENST00000355155 CUL4AQ13619 759 aa20.75■□□□□ 0.91
VPS13B-201ENST00000355155 LRRFIP1Q32MZ4 808 aaKnown RBP20.75■□□□□ 0.91
VPS13B-201ENST00000355155 ERFEQ4G0M1 354 aa20.75■□□□□ 0.91
VPS13B-201ENST00000355155 FAM182BQ5T319 152 aa20.75■□□□□ 0.91
VPS13B-201ENST00000355155 TTC14Q96N46 770 aa20.75■□□□□ 0.91
VPS13B-201ENST00000355155 QSER1Q2KHR3 1735 aa20.75■□□□□ 0.91
VPS13B-201ENST00000355155 TAF5LO75529 589 aa20.75■□□□□ 0.91
VPS13B-201ENST00000355155 ZFYP08048 801 aaPredicted RBP20.75■□□□□ 0.91
VPS13B-201ENST00000355155 ADORA1P30542 326 aa20.75■□□□□ 0.91
VPS13B-201ENST00000355155 CDC5LQ99459 802 aaKnown RBP20.75■□□□□ 0.91
VPS13B-201ENST00000355155 ZPR1O75312 459 aa20.74■□□□□ 0.91
VPS13B-201ENST00000355155 MCMDC2Q4G0Z9 681 aa20.74■□□□□ 0.91
VPS13B-201ENST00000355155 AMIGO3Q86WK7 504 aa20.74■□□□□ 0.91
VPS13B-201ENST00000355155 HMG20BQ9P0W2 317 aa20.74■□□□□ 0.91
VPS13B-201ENST00000355155 PLSCR1O15162 318 aa20.74■□□□□ 0.91
VPS13B-201ENST00000355155 UQCRFS1P1P0C7P4 283 aa20.74■□□□□ 0.91
VPS13B-201ENST00000355155 CARMIL3Q8ND23 1372 aa20.74■□□□□ 0.91
VPS13B-201ENST00000355155 TRAPPC3LQ5T215 181 aa20.73■□□□□ 0.91
VPS13B-201ENST00000355155 KCNQ4P56696 695 aa20.73■□□□□ 0.91
VPS13B-201ENST00000355155 TTC39AQ5SRH9 613 aa20.73■□□□□ 0.91
VPS13B-201ENST00000355155 SETDB2Q96T68 719 aa20.73■□□□□ 0.91
VPS13B-201ENST00000355155 IGHMBP2P38935 993 aaKnown RBP20.73■□□□□ 0.91
VPS13B-201ENST00000355155 EDC3Q96F86 508 aaKnown RBP20.73■□□□□ 0.91
VPS13B-201ENST00000355155 CWC22Q9HCG8 908 aaKnown RBP20.73■□□□□ 0.91
VPS13B-201ENST00000355155 BSDC1Q9NW68 430 aaPredicted RBP20.73■□□□□ 0.91
VPS13B-201ENST00000355155 DSCC1Q9BVC3 393 aa20.72■□□□□ 0.91
VPS13B-201ENST00000355155 ZSWIM6Q9HCJ5 1215 aa20.72■□□□□ 0.91
VPS13B-201ENST00000355155 RNF113AO15541 343 aaKnown RBP20.72■□□□□ 0.91
VPS13B-201ENST00000355155 CCDC85AQ96PX6 553 aaPredicted RBP20.72■□□□□ 0.91
VPS13B-201ENST00000355155 SRP68Q9UHB9 627 aaKnown RBP20.72■□□□□ 0.91
VPS13B-201ENST00000355155 RASEFQ8IZ41 740 aa20.71■□□□□ 0.91
VPS13B-201ENST00000355155 INTS4Q96HW7 963 aaKnown RBP20.71■□□□□ 0.91
VPS13B-201ENST00000355155 SEC31BQ9NQW1 1179 aa20.71■□□□□ 0.91
VPS13B-201ENST00000355155 RBM8AQ9Y5S9 174 aaKnown RBP20.71■□□□□ 0.91
VPS13B-201ENST00000355155 CLEC17AQ6ZS10 378 aa20.71■□□□□ 0.91
VPS13B-201ENST00000355155 ZNF589Q86UQ0 364 aaPredicted RBP20.71■□□□□ 0.91
VPS13B-201ENST00000355155 DNAJC2Q99543 621 aaKnown RBP20.71■□□□□ 0.91
VPS13B-201ENST00000355155 SLC5A1P13866 664 aa20.7■□□□□ 0.9
VPS13B-201ENST00000355155 TTF1Q15361 905 aaPredicted RBP20.7■□□□□ 0.9
VPS13B-201ENST00000355155 CREB3L3Q68CJ9 461 aa20.7■□□□□ 0.9
VPS13B-201ENST00000355155 LRRC37AA6NMS7 1700 aa20.7■□□□□ 0.9
VPS13B-201ENST00000355155 GOLIM4O00461 696 aa20.7■□□□□ 0.9
VPS13B-201ENST00000355155 NFKBIBQ15653 356 aa20.7■□□□□ 0.9
VPS13B-201ENST00000355155 TPTE2Q6XPS3 522 aa20.7■□□□□ 0.9
VPS13B-201ENST00000355155 U3KPZ7 1027 aaPredicted RBP20.7■□□□□ 0.9
VPS13B-201ENST00000355155 ZNF804BA4D1E1 1349 aa20.69■□□□□ 0.9
VPS13B-201ENST00000355155 DDX46Q7L014 1031 aaKnown RBP20.69■□□□□ 0.9
VPS13B-201ENST00000355155 MPHOSPH8Q99549 860 aa20.69■□□□□ 0.9
VPS13B-201ENST00000355155 LAMA4Q16363 1823 aa20.69■□□□□ 0.9
VPS13B-201ENST00000355155 KIAA1551Q9HCM1 1747 aa20.69■□□□□ 0.9
VPS13B-201ENST00000355155 SLC27A2O14975 620 aa20.69■□□□□ 0.9
VPS13B-201ENST00000355155 NEK4P51957 841 aa20.69■□□□□ 0.9
VPS13B-201ENST00000355155 MCAMP43121 646 aa20.68■□□□□ 0.9
VPS13B-201ENST00000355155 C3orf67Q6ZVT6 689 aa20.68■□□□□ 0.9
VPS13B-201ENST00000355155 RFC4P35249 363 aa20.68■□□□□ 0.9
VPS13B-201ENST00000355155 RAB3GAP1Q15042 981 aa20.68■□□□□ 0.9
VPS13B-201ENST00000355155 VPS53Q5VIR6 699 aa20.68■□□□□ 0.9
VPS13B-201ENST00000355155 RNF20Q5VTR2 975 aa20.68■□□□□ 0.9
VPS13B-201ENST00000355155 CCDC102BQ68D86 513 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms