RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 PSME1Q06323 249 aa9.13□□□□□ -0.95
CD46-203ENST00000354848 STK3Q13188 491 aa9.13□□□□□ -0.95
CD46-203ENST00000354848 DHX8Q14562 1220 aaKnown RBP9.13□□□□□ -0.95
CD46-203ENST00000354848 CREB3L3Q68CJ9 461 aa9.13□□□□□ -0.95
CD46-203ENST00000354848 SUGP1Q8IWZ8 645 aaKnown RBP9.13□□□□□ -0.95
CD46-203ENST00000354848 ARHGEF10O15013 1369 aa9.13□□□□□ -0.95
CD46-203ENST00000354848 PIK3C2BO00750 1634 aa9.13□□□□□ -0.95
CD46-203ENST00000354848 MAP3K9P80192 1104 aa9.12□□□□□ -0.95
CD46-203ENST00000354848 PPP2R3AQ06190 1150 aa9.12□□□□□ -0.95
CD46-203ENST00000354848 APOBRQ0VD83 1088 aa9.12□□□□□ -0.95
CD46-203ENST00000354848 RABGGTAQ92696 567 aa9.12□□□□□ -0.95
CD46-203ENST00000354848 PDE11AQ9HCR9 933 aa9.12□□□□□ -0.95
CD46-203ENST00000354848 RBM8AQ9Y5S9 174 aaKnown RBP9.12□□□□□ -0.95
CD46-203ENST00000354848 N4BP2Q86UW6 1770 aaPredicted RBP9.12□□□□□ -0.95
CD46-203ENST00000354848 CCDC151A5D8V7 595 aa9.12□□□□□ -0.95
CD46-203ENST00000354848 ANKRD65E5RJM6 399 aa9.12□□□□□ -0.95
CD46-203ENST00000354848 CCDC172P0C7W6 258 aa9.12□□□□□ -0.95
CD46-203ENST00000354848 BRD2P25440 801 aaKnown RBP9.12□□□□□ -0.95
CD46-203ENST00000354848 RRS1Q15050 365 aaKnown RBP9.12□□□□□ -0.95
CD46-203ENST00000354848 NBPF6Q5VWK0 638 aa9.12□□□□□ -0.95
CD46-203ENST00000354848 CCDC73Q6ZRK6 1079 aa9.12□□□□□ -0.95
CD46-203ENST00000354848 FAM177A1Q8N128 213 aaPredicted RBP9.12□□□□□ -0.95
CD46-203ENST00000354848 ENGASEQ8NFI3 743 aa9.12□□□□□ -0.95
CD46-203ENST00000354848 NBPF4Q96M43 638 aa9.12□□□□□ -0.95
CD46-203ENST00000354848 CEP83Q9Y592 693 aa9.12□□□□□ -0.95
CD46-203ENST00000354848 MRFAP1Q9Y605 127 aa9.12□□□□□ -0.95
CD46-203ENST00000354848 ITSN1Q15811 1721 aa9.12□□□□□ -0.95
CD46-203ENST00000354848 JAK2O60674 1132 aa9.12□□□□□ -0.95
CD46-203ENST00000354848 TOB2Q14106 344 aaPredicted RBP9.12□□□□□ -0.95
CD46-203ENST00000354848 ANKRD1Q15327 319 aa9.12□□□□□ -0.95
CD46-203ENST00000354848 SWT1Q5T5J6 900 aaKnown RBP9.12□□□□□ -0.95
CD46-203ENST00000354848 EP400NLQ6ZTU2 488 aa9.12□□□□□ -0.95
CD46-203ENST00000354848 CCDC91Q7Z6B0 441 aa9.12□□□□□ -0.95
CD46-203ENST00000354848 BRF1Q92994 677 aa9.12□□□□□ -0.95
CD46-203ENST00000354848 MPHOSPH8Q99549 860 aa9.12□□□□□ -0.95
CD46-203ENST00000354848 UTP14AQ9BVJ6 771 aaKnown RBP9.12□□□□□ -0.95
CD46-203ENST00000354848 FTOQ9C0B1 505 aaKnown RBP eCLIP9.12□□□□□ -0.95
CD46-203ENST00000354848 CRB1P82279 1406 aa9.12□□□□□ -0.95
CD46-203ENST00000354848 VWA3AA6NCI4 1184 aa9.11□□□□□ -0.95
CD46-203ENST00000354848 PSMA5P28066 241 aa9.11□□□□□ -0.95
CD46-203ENST00000354848 ADD1P35611 737 aaKnown RBP9.11□□□□□ -0.95
CD46-203ENST00000354848 GSCP56915 257 aaPredicted RBP9.11□□□□□ -0.95
CD46-203ENST00000354848 FAM160A1Q05DH4 1040 aa9.11□□□□□ -0.95
CD46-203ENST00000354848 FLIIQ13045 1269 aa9.11□□□□□ -0.95
CD46-203ENST00000354848 JAKMIP3Q5VZ66 844 aa9.11□□□□□ -0.95
CD46-203ENST00000354848 USP44Q9H0E7 712 aa9.11□□□□□ -0.95
CD46-203ENST00000354848 MKRN1Q9UHC7 482 aaKnown RBP9.11□□□□□ -0.95
CD46-203ENST00000354848 RCOR1Q9UKL0 485 aa9.11□□□□□ -0.95
CD46-203ENST00000354848 CPP00450 1065 aa9.11□□□□□ -0.95
CD46-203ENST00000354848 TXLNAP40222 546 aa9.11□□□□□ -0.95
CD46-203ENST00000354848 MCM6Q14566 821 aa9.11□□□□□ -0.95
CD46-203ENST00000354848 DPCR1Q3MIW9 517 aa9.11□□□□□ -0.95
CD46-203ENST00000354848 MCTP2Q6DN12 878 aa9.11□□□□□ -0.95
CD46-203ENST00000354848 BLOC1S2Q6QNY1 142 aa9.11□□□□□ -0.95
CD46-203ENST00000354848 MMS22LQ6ZRQ5 1243 aa9.11□□□□□ -0.95
CD46-203ENST00000354848 PPP1R42Q7Z4L9 355 aa9.11□□□□□ -0.95
CD46-203ENST00000354848 BANK1Q8NDB2 785 aa9.11□□□□□ -0.95
CD46-203ENST00000354848 ZNF622Q969S3 477 aaKnown RBP eCLIP9.11□□□□□ -0.952e-9■□□□□ 9.2
CD46-203ENST00000354848 WDR24Q96S15 920 aa9.11□□□□□ -0.95
CD46-203ENST00000354848 CXorf56Q9H5V9 222 aa9.11□□□□□ -0.95
CD46-203ENST00000354848 ZRANB1Q9UGI0 708 aa9.11□□□□□ -0.95
CD46-203ENST00000354848 H3BQV1 296 aa9.1□□□□□ -0.95
CD46-203ENST00000354848 SLC27A2O14975 620 aa9.1□□□□□ -0.95
CD46-203ENST00000354848 SRGAP3O43295 1099 aa9.1□□□□□ -0.95
CD46-203ENST00000354848 N4BP1O75113 896 aaKnown RBP9.1□□□□□ -0.95
CD46-203ENST00000354848 UBTFL1P0CB47 393 aaPredicted RBP9.1□□□□□ -0.95
CD46-203ENST00000354848 BRD3Q15059 726 aa9.1□□□□□ -0.95
CD46-203ENST00000354848 IFFO2Q5TF58 517 aa9.1□□□□□ -0.95
CD46-203ENST00000354848 SULT6B1Q6IMI4 303 aa9.1□□□□□ -0.95
CD46-203ENST00000354848 LRRC31Q6UY01 552 aa9.1□□□□□ -0.95
CD46-203ENST00000354848 GOLGA1Q92805 767 aa9.1□□□□□ -0.95
CD46-203ENST00000354848 STK31Q9BXU1 1019 aa9.1□□□□□ -0.95
CD46-203ENST00000354848 AKAP2Q9Y2D5 859 aa9.1□□□□□ -0.95
CD46-203ENST00000354848 FAN1Q9Y2M0 1017 aa9.1□□□□□ -0.95
CD46-203ENST00000354848 MAP3K5Q99683 1374 aa9.1□□□□□ -0.95
CD46-203ENST00000354848 KIDINS220Q9ULH0 1771 aa9.1□□□□□ -0.95
CD46-203ENST00000354848 CACNA1FO60840 1977 aa9.1□□□□□ -0.95
CD46-203ENST00000354848 GLRX3O76003 335 aaKnown RBP9.1□□□□□ -0.95
CD46-203ENST00000354848 RPS6KB1P23443 525 aa9.1□□□□□ -0.95
CD46-203ENST00000354848 CCDC30Q5VVM6 783 aa9.1□□□□□ -0.95
CD46-203ENST00000354848 NME9Q86XW9 330 aa9.1□□□□□ -0.95
CD46-203ENST00000354848 MAP4K1Q92918 833 aa9.1□□□□□ -0.95
CD46-203ENST00000354848 BPIFA3Q9BQP9 254 aa9.1□□□□□ -0.95
CD46-203ENST00000354848 FAM208AQ9UK61 1670 aaKnown RBP9.1□□□□□ -0.95
CD46-203ENST00000354848 ZSCAN12O43309 604 aa9.1□□□□□ -0.95
CD46-203ENST00000354848 POLA2Q14181 598 aa9.1□□□□□ -0.95
CD46-203ENST00000354848 BEND6Q5SZJ8 279 aaPredicted RBP9.1□□□□□ -0.95
CD46-203ENST00000354848 EFCAB13Q8IY85 973 aa9.1□□□□□ -0.95
CD46-203ENST00000354848 FSIP1Q8NA03 581 aa9.1□□□□□ -0.95
CD46-203ENST00000354848 FMNL2Q96PY5 1086 aa9.1□□□□□ -0.95
CD46-203ENST00000354848 CEP89Q96ST8 783 aa9.1□□□□□ -0.95
CD46-203ENST00000354848 ALDH8A1Q9H2A2 487 aaPredicted RBP9.1□□□□□ -0.95
CD46-203ENST00000354848 TSPYL4Q9UJ04 414 aa9.1□□□□□ -0.95
CD46-203ENST00000354848 USP42Q9H9J4 1324 aaKnown RBP9.1□□□□□ -0.95
CD46-203ENST00000354848 SIGLEC1Q9BZZ2 1709 aa9.09□□□□□ -0.95
CD46-203ENST00000354848 GNG11P61952 73 aa9.09□□□□□ -0.95
CD46-203ENST00000354848 HNRNPLLQ8WVV9 542 aaKnown RBP9.09□□□□□ -0.95
CD46-203ENST00000354848 PPP2R2CQ9Y2T4 447 aa9.09□□□□□ -0.95
CD46-203ENST00000354848 TAF6LQ9Y6J9 622 aa9.09□□□□□ -0.95
CD46-203ENST00000354848 NCAPHQ15003 741 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms