RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 AKAP2Q9Y2D5 859 aa9.09□□□□□ -0.95
SCN8A-201ENST00000354534 SH3BGRP55822 239 aaPredicted RBP9.09□□□□□ -0.95
SCN8A-201ENST00000354534 CCDC125Q86Z20 511 aa9.09□□□□□ -0.95
SCN8A-201ENST00000354534 A0A087WZG4 1122 aa9.09□□□□□ -0.95
SCN8A-201ENST00000354534 PPARDQ03181 441 aa9.09□□□□□ -0.95
SCN8A-201ENST00000354534 SF3A3Q12874 501 aaKnown RBP eCLIP9.09□□□□□ -0.95
SCN8A-201ENST00000354534 ARHGAP24Q8N264 748 aa9.09□□□□□ -0.95
SCN8A-201ENST00000354534 ZCRB1Q8TBF4 217 aaKnown RBP9.09□□□□□ -0.95
SCN8A-201ENST00000354534 POLA1P09884 1462 aaPredicted RBP9.09□□□□□ -0.96
SCN8A-201ENST00000354534 POTEDQ86YR6 584 aa9.09□□□□□ -0.96
SCN8A-201ENST00000354534 PPP1R12AO14974 1030 aaPredicted RBP9.08□□□□□ -0.96
SCN8A-201ENST00000354534 CAVIN2O95810 425 aa9.08□□□□□ -0.96
SCN8A-201ENST00000354534 NLRP5P59047 1200 aa9.08□□□□□ -0.96
SCN8A-201ENST00000354534 SSRP1Q08945 709 aaKnown RBP9.08□□□□□ -0.96
SCN8A-201ENST00000354534 LRRC23Q53EV4 343 aaPredicted RBP9.08□□□□□ -0.96
SCN8A-201ENST00000354534 AFAP1L2Q8N4X5 818 aa9.08□□□□□ -0.96
SCN8A-201ENST00000354534 GIMAP4Q9NUV9 329 aa9.08□□□□□ -0.96
SCN8A-201ENST00000354534 MRFAP1Q9Y605 127 aa9.08□□□□□ -0.96
SCN8A-201ENST00000354534 RBBP5Q15291 538 aaKnown RBP9.08□□□□□ -0.96
SCN8A-201ENST00000354534 ZNF287Q9HBT7 754 aa9.08□□□□□ -0.96
SCN8A-201ENST00000354534 NOB1Q9ULX3 412 aaKnown RBP9.08□□□□□ -0.96
SCN8A-201ENST00000354534 FRMD3A2A2Y4 597 aa9.08□□□□□ -0.96
SCN8A-201ENST00000354534 ATF3P18847 181 aa9.08□□□□□ -0.96
SCN8A-201ENST00000354534 MTRF1LQ9UGC7 380 aaKnown RBP9.08□□□□□ -0.96
SCN8A-201ENST00000354534 CCDC196A0A1B0GTZ2 297 aa9.08□□□□□ -0.96
SCN8A-201ENST00000354534 AFAP1L1Q8TED9 768 aa9.08□□□□□ -0.96
SCN8A-201ENST00000354534 SCAND2PQ9GZW5 306 aaPredicted RBP9.08□□□□□ -0.96
SCN8A-201ENST00000354534 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.08□□□□□ -0.96
SCN8A-201ENST00000354534 UTP14CQ5TAP6 766 aaKnown RBP9.08□□□□□ -0.96
SCN8A-201ENST00000354534 RABEP2Q9H5N1 569 aa9.08□□□□□ -0.96
SCN8A-201ENST00000354534 GAS2L2Q8NHY3 880 aa9.08□□□□□ -0.96
SCN8A-201ENST00000354534 KLHDC4Q8TBB5 520 aa9.08□□□□□ -0.96
SCN8A-201ENST00000354534 EXOC1Q9NV70 894 aa9.08□□□□□ -0.96
SCN8A-201ENST00000354534 CDR2Q01850 454 aa9.08□□□□□ -0.96
SCN8A-201ENST00000354534 HDXQ7Z353 690 aa9.08□□□□□ -0.96
SCN8A-201ENST00000354534 N4BP3O15049 544 aa9.08□□□□□ -0.96
SCN8A-201ENST00000354534 TRIM47Q96LD4 638 aa9.08□□□□□ -0.96
SCN8A-201ENST00000354534 EHMT1Q9H9B1 1298 aa9.08□□□□□ -0.96
SCN8A-201ENST00000354534 PALMDQ9NP74 551 aa9.08□□□□□ -0.96
SCN8A-201ENST00000354534 POLR3DP05423 398 aaPredicted RBP9.08□□□□□ -0.96
SCN8A-201ENST00000354534 IDEP14735 1019 aa9.08□□□□□ -0.96
SCN8A-201ENST00000354534 ITIH3Q06033 890 aa9.08□□□□□ -0.96
SCN8A-201ENST00000354534 DDX54Q8TDD1 881 aaKnown RBP9.08□□□□□ -0.96
SCN8A-201ENST00000354534 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.08□□□□□ -0.96
SCN8A-201ENST00000354534 SCHIP1Q9P0W5 487 aaPredicted RBP9.08□□□□□ -0.96
SCN8A-201ENST00000354534 TCP11L1Q9NUJ3 509 aa9.07□□□□□ -0.96
SCN8A-201ENST00000354534 IDH1O75874 414 aaKnown RBP9.07□□□□□ -0.96
SCN8A-201ENST00000354534 HSP90AA4PQ58FG1 418 aa9.07□□□□□ -0.96
SCN8A-201ENST00000354534 RAB11FIP4Q86YS3 637 aa9.07□□□□□ -0.96
SCN8A-201ENST00000354534 TRIM55Q9BYV6 548 aa9.07□□□□□ -0.96
SCN8A-201ENST00000354534 MYOM3Q5VTT5 1437 aa9.07□□□□□ -0.96
SCN8A-201ENST00000354534 VAV2P52735 878 aa9.07□□□□□ -0.96
SCN8A-201ENST00000354534 ARFGAP2Q8N6H7 521 aa9.07□□□□□ -0.96
SCN8A-201ENST00000354534 SERPINI2O75830 405 aa9.07□□□□□ -0.96
SCN8A-201ENST00000354534 CNGA1P29973 690 aa9.07□□□□□ -0.96
SCN8A-201ENST00000354534 PNMA8AQ86V59 439 aaPredicted RBP9.07□□□□□ -0.96
SCN8A-201ENST00000354534 SPDL1Q96EA4 605 aa9.07□□□□□ -0.96
SCN8A-201ENST00000354534 RILPQ96NA2 401 aa9.07□□□□□ -0.96
SCN8A-201ENST00000354534 NDUFAB1O14561 156 aa9.07□□□□□ -0.96
SCN8A-201ENST00000354534 USP6NLQ92738 828 aa9.07□□□□□ -0.96
SCN8A-201ENST00000354534 MYCBPQ99417 103 aaPredicted RBP9.07□□□□□ -0.96
SCN8A-201ENST00000354534 DDX21Q9NR30 783 aaKnown RBP eCLIP9.07□□□□□ -0.96
SCN8A-201ENST00000354534 INF2Q27J81 1249 aa9.07□□□□□ -0.96
SCN8A-201ENST00000354534 AIDAQ96BJ3 306 aa9.07□□□□□ -0.96
SCN8A-201ENST00000354534 ABCF2Q9UG63 623 aa9.07□□□□□ -0.96
SCN8A-201ENST00000354534 IRX4P78413 519 aa9.07□□□□□ -0.96
SCN8A-201ENST00000354534 TMEM57Q8N5G2 664 aa9.07□□□□□ -0.96
SCN8A-201ENST00000354534 BAIAP2L1Q9UHR4 511 aa9.07□□□□□ -0.96
SCN8A-201ENST00000354534 AMOTQ4VCS5 1084 aa9.07□□□□□ -0.96
SCN8A-201ENST00000354534 SPATS2Q86XZ4 545 aaKnown RBP9.07□□□□□ -0.96
SCN8A-201ENST00000354534 CRACR2BQ8N4Y2 399 aaPredicted RBP9.06□□□□□ -0.96
SCN8A-201ENST00000354534 PANK2Q9BZ23 570 aa9.06□□□□□ -0.96
SCN8A-201ENST00000354534 AGTPBP1Q9UPW5 1226 aa9.06□□□□□ -0.96
SCN8A-201ENST00000354534 U3KPZ7 1027 aaPredicted RBP9.06□□□□□ -0.96
SCN8A-201ENST00000354534 PLEKHH2Q8IVE3 1493 aa9.06□□□□□ -0.96
SCN8A-201ENST00000354534 E7EVH7 732 aa9.06□□□□□ -0.96
SCN8A-201ENST00000354534 BAG2O95816 211 aa9.06□□□□□ -0.96
SCN8A-201ENST00000354534 TTF1Q15361 905 aaPredicted RBP9.06□□□□□ -0.96
SCN8A-201ENST00000354534 CHD1LQ86WJ1 897 aa9.06□□□□□ -0.96
SCN8A-201ENST00000354534 PROCA1Q8NCQ7 364 aaPredicted RBP9.06□□□□□ -0.96
SCN8A-201ENST00000354534 DDX41Q9UJV9 622 aaKnown RBP9.06□□□□□ -0.96
SCN8A-201ENST00000354534 RASIP1Q5U651 963 aa9.06□□□□□ -0.96
SCN8A-201ENST00000354534 HAUS8Q9BT25 410 aa9.06□□□□□ -0.96
SCN8A-201ENST00000354534 FBXO2Q9UK22 296 aaPredicted RBP9.06□□□□□ -0.96
SCN8A-201ENST00000354534 ATP6V0A2Q9Y487 856 aa9.06□□□□□ -0.96
SCN8A-201ENST00000354534 CCDC88BA6NC98 1476 aa9.06□□□□□ -0.96
SCN8A-201ENST00000354534 LONP1P36776 959 aaKnown RBP9.06□□□□□ -0.96
SCN8A-201ENST00000354534 ZNF165P49910 485 aa9.06□□□□□ -0.96
SCN8A-201ENST00000354534 NOLC1Q14978 699 aaKnown RBP eCLIP9.06□□□□□ -0.96
SCN8A-201ENST00000354534 TAOK1Q7L7X3 1001 aa9.06□□□□□ -0.96
SCN8A-201ENST00000354534 VSIG1Q86XK7 387 aa9.06□□□□□ -0.96
SCN8A-201ENST00000354534 LMBR1Q8WVP7 490 aa9.06□□□□□ -0.96
SCN8A-201ENST00000354534 ATP2B3Q16720 1220 aa9.06□□□□□ -0.96
SCN8A-201ENST00000354534 RASEFQ8IZ41 740 aa9.05□□□□□ -0.96
SCN8A-201ENST00000354534 RLBP1P12271 317 aa9.05□□□□□ -0.96
SCN8A-201ENST00000354534 GPR161Q8N6U8 529 aaKnown RBP9.05□□□□□ -0.96
SCN8A-201ENST00000354534 IWS1Q96ST2 819 aa9.05□□□□□ -0.96
SCN8A-201ENST00000354534 BCAR3O75815 825 aa9.05□□□□□ -0.96
SCN8A-201ENST00000354534 KANK3Q6NY19 840 aa9.05□□□□□ -0.96
SCN8A-201ENST00000354534 RBM27Q9P2N5 1060 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms