RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 GRM1Q13255 1194 aa15.97■□□□□ 0.15
SMC6-201ENST00000351948 CLASP1Q7Z460 1538 aa15.97■□□□□ 0.15
SMC6-201ENST00000351948 CLTCL1P53675 1640 aa15.97■□□□□ 0.15
SMC6-201ENST00000351948 TET3O43151 1660 aa15.97■□□□□ 0.15
SMC6-201ENST00000351948 NEURL1BA8MQ27 555 aa15.97■□□□□ 0.15
SMC6-201ENST00000351948 CHMLP26374 656 aa15.97■□□□□ 0.15
SMC6-201ENST00000351948 CNKSR2Q8WXI2 1034 aa15.97■□□□□ 0.15
SMC6-201ENST00000351948 XAGE2Q96GT9 111 aa15.97■□□□□ 0.15
SMC6-201ENST00000351948 MYO1BO43795 1136 aa15.96■□□□□ 0.15
SMC6-201ENST00000351948 MYCNP04198 464 aaPredicted RBP15.96■□□□□ 0.15
SMC6-201ENST00000351948 CT47A1Q5JQC4 288 aaPredicted RBP15.96■□□□□ 0.15
SMC6-201ENST00000351948 KLHL10Q6JEL2 608 aa15.96■□□□□ 0.15
SMC6-201ENST00000351948 CKAP2LQ8IYA6 745 aa15.96■□□□□ 0.15
SMC6-201ENST00000351948 CEP57L1Q8IYX8 460 aa15.96■□□□□ 0.15
SMC6-201ENST00000351948 EDC3Q96F86 508 aaKnown RBP15.96■□□□□ 0.15
SMC6-201ENST00000351948 IGSF1Q8N6C5 1336 aa15.96■□□□□ 0.15
SMC6-201ENST00000351948 USP44Q9H0E7 712 aa15.96■□□□□ 0.15
SMC6-201ENST00000351948 ZKSCAN3Q9BRR0 538 aa15.96■□□□□ 0.15
SMC6-201ENST00000351948 FILIP1LQ4L180 1135 aa15.96■□□□□ 0.14
SMC6-201ENST00000351948 TRIM37O94972 964 aa15.95■□□□□ 0.14
SMC6-201ENST00000351948 LDHBP07195 334 aaKnown RBP15.95■□□□□ 0.14
SMC6-201ENST00000351948 ZFYVE27Q5T4F4 411 aa15.95■□□□□ 0.14
SMC6-201ENST00000351948 CARD10Q9BWT7 1032 aa15.95■□□□□ 0.14
SMC6-201ENST00000351948 AXIN2Q9Y2T1 843 aa15.95■□□□□ 0.14
SMC6-201ENST00000351948 MBD4O95243 580 aa15.95■□□□□ 0.14
SMC6-201ENST00000351948 LOC102724428A0A0B4J2F2 783 aa15.95■□□□□ 0.14
SMC6-201ENST00000351948 SIK1P57059 783 aa15.95■□□□□ 0.14
SMC6-201ENST00000351948 IFIT1BQ5T764 474 aaKnown RBP15.95■□□□□ 0.14
SMC6-201ENST00000351948 ZBTB43O43298 467 aa15.95■□□□□ 0.14
SMC6-201ENST00000351948 ZGPATQ8N5A5 531 aaKnown RBP15.95■□□□□ 0.14
SMC6-201ENST00000351948 ESR2Q92731 530 aa15.95■□□□□ 0.14
SMC6-201ENST00000351948 SHROOM2Q13796 1616 aa15.94■□□□□ 0.14
SMC6-201ENST00000351948 JDP2Q8WYK2 163 aa15.94■□□□□ 0.14
SMC6-201ENST00000351948 BMP2KQ9NSY1 1161 aaPredicted RBP15.94■□□□□ 0.14
SMC6-201ENST00000351948 ATP7BP35670 1465 aa15.94■□□□□ 0.14
SMC6-201ENST00000351948 PRC1O43663 620 aa15.94■□□□□ 0.14
SMC6-201ENST00000351948 TCIRG1Q13488 830 aa15.94■□□□□ 0.14
SMC6-201ENST00000351948 FAM227BQ96M60 508 aa15.94■□□□□ 0.14
SMC6-201ENST00000351948 AATKQ6ZMQ8 1374 aa15.94■□□□□ 0.14
SMC6-201ENST00000351948 WDR17Q8IZU2 1322 aa15.94■□□□□ 0.14
SMC6-201ENST00000351948 SAP30BPQ9UHR5 308 aaKnown RBP15.94■□□□□ 0.14
SMC6-201ENST00000351948 CDC42BPBQ9Y5S2 1711 aa15.94■□□□□ 0.14
SMC6-201ENST00000351948 ARHGAP31Q2M1Z3 1444 aa15.94■□□□□ 0.14
SMC6-201ENST00000351948 FILIP1Q7Z7B0 1213 aa15.94■□□□□ 0.14
SMC6-201ENST00000351948 RBM17Q96I25 401 aaKnown RBP15.94■□□□□ 0.14
SMC6-201ENST00000351948 ANKRD2Q9GZV1 360 aa15.94■□□□□ 0.14
SMC6-201ENST00000351948 ZBTB1Q9Y2K1 713 aa15.94■□□□□ 0.14
SMC6-201ENST00000351948 STIM1Q13586 685 aa15.93■□□□□ 0.14
SMC6-201ENST00000351948 CREB3L3Q68CJ9 461 aa15.93■□□□□ 0.14
SMC6-201ENST00000351948 SCAND2PQ9GZW5 306 aaPredicted RBP15.93■□□□□ 0.14
SMC6-201ENST00000351948 KIF5BP33176 963 aa15.93■□□□□ 0.14
SMC6-201ENST00000351948 MAP3K11Q16584 847 aa15.93■□□□□ 0.14
SMC6-201ENST00000351948 APOBRQ0VD83 1088 aa15.93■□□□□ 0.14
SMC6-201ENST00000351948 CEP131Q9UPN4 1083 aa15.93■□□□□ 0.14
SMC6-201ENST00000351948 CLEC11AQ9Y240 323 aa15.93■□□□□ 0.14
SMC6-201ENST00000351948 BIN1O00499 593 aa15.92■□□□□ 0.14
SMC6-201ENST00000351948 HIBADHP31937 336 aaKnown RBP15.92■□□□□ 0.14
SMC6-201ENST00000351948 PUM3Q15397 648 aaKnown RBP15.92■□□□□ 0.14
SMC6-201ENST00000351948 HDAC9Q9UKV0 1011 aa15.92■□□□□ 0.14
SMC6-201ENST00000351948 GJA3Q9Y6H8 435 aa15.92■□□□□ 0.14
SMC6-201ENST00000351948 ISM2Q6H9L7 571 aa15.92■□□□□ 0.14
SMC6-201ENST00000351948 ARMT1Q9H993 441 aa15.92■□□□□ 0.14
SMC6-201ENST00000351948 GRPEL1Q9HAV7 217 aa15.92■□□□□ 0.14
SMC6-201ENST00000351948 PRDM1O75626 825 aa15.92■□□□□ 0.14
SMC6-201ENST00000351948 IQGAP3Q86VI3 1631 aa15.92■□□□□ 0.14
SMC6-201ENST00000351948 KRT23Q9C075 422 aa15.91■□□□□ 0.14
SMC6-201ENST00000351948 USPL1Q5W0Q7 1092 aa15.91■□□□□ 0.14
SMC6-201ENST00000351948 FSIP1Q8NA03 581 aa15.91■□□□□ 0.14
SMC6-201ENST00000351948 UBA5Q9GZZ9 404 aa15.91■□□□□ 0.14
SMC6-201ENST00000351948 ARAP3Q8WWN8 1544 aa15.91■□□□□ 0.14
SMC6-201ENST00000351948 CRKLP46109 303 aaKnown RBP15.91■□□□□ 0.14
SMC6-201ENST00000351948 AK2P54819 239 aa15.91■□□□□ 0.14
SMC6-201ENST00000351948 FAM43AQ8N2R8 423 aa15.91■□□□□ 0.14
SMC6-201ENST00000351948 CCDC39Q9UFE4 941 aa15.91■□□□□ 0.14
SMC6-201ENST00000351948 TRPC5Q9UL62 973 aaPredicted RBP15.9■□□□□ 0.14
SMC6-201ENST00000351948 CCDC171Q6TFL3 1326 aa15.9■□□□□ 0.14
SMC6-201ENST00000351948 RTN1Q16799 776 aa15.9■□□□□ 0.14
SMC6-201ENST00000351948 CUL5Q93034 780 aa15.9■□□□□ 0.14
SMC6-201ENST00000351948 SETD1BQ9UPS6 1966 aaKnown RBP15.9■□□□□ 0.14
SMC6-201ENST00000351948 FAM177A1Q8N128 213 aaPredicted RBP15.9■□□□□ 0.14
SMC6-201ENST00000351948 ALG1Q9BT22 464 aa15.9■□□□□ 0.14
SMC6-201ENST00000351948 GGA1Q9UJY5 639 aa15.9■□□□□ 0.14
SMC6-201ENST00000351948 RNF17Q9BXT8 1623 aaKnown RBP15.9■□□□□ 0.14
SMC6-201ENST00000351948 ADGRL3Q9HAR2 1447 aa15.89■□□□□ 0.13
SMC6-201ENST00000351948 ZAP70P43403 619 aa15.89■□□□□ 0.13
SMC6-201ENST00000351948 HEATR3Q7Z4Q2 680 aa15.89■□□□□ 0.13
SMC6-201ENST00000351948 RBM27Q9P2N5 1060 aaKnown RBP15.89■□□□□ 0.13
SMC6-201ENST00000351948 MATR3P43243 847 aaKnown RBP eCLIP15.89■□□□□ 0.13
SMC6-201ENST00000351948 BEND3Q5T5X7 828 aa15.89■□□□□ 0.13
SMC6-201ENST00000351948 SPATA31A3Q5VYP0 1347 aa15.89■□□□□ 0.13
SMC6-201ENST00000351948 EYA3Q99504 573 aa15.89■□□□□ 0.13
SMC6-201ENST00000351948 DPP8Q6V1X1 898 aaPredicted RBP15.88■□□□□ 0.13
SMC6-201ENST00000351948 EIF6P56537 245 aaKnown RBP15.88■□□□□ 0.13
SMC6-201ENST00000351948 LRRC24Q50LG9 513 aa15.88■□□□□ 0.13
SMC6-201ENST00000351948 BAG4O95429 457 aaKnown RBP15.88■□□□□ 0.13
SMC6-201ENST00000351948 CNNM2Q9H8M5 875 aa15.88■□□□□ 0.13
SMC6-201ENST00000351948 DACH1Q9UI36 760 aa15.88■□□□□ 0.13
SMC6-201ENST00000351948 RIMBP3CA6NJZ7 1639 aa15.88■□□□□ 0.13
SMC6-201ENST00000351948 RIMBP3BA6NNM3 1639 aa15.88■□□□□ 0.13
SMC6-201ENST00000351948 ABCA9Q8IUA7 1624 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms