RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 KCNJ6P48051 423 aa16.63■□□□□ 0.25
RLIM-202ENST00000349225 GOLGA8FQ08AF8 430 aa16.63■□□□□ 0.25
RLIM-202ENST00000349225 GOLGA8DPQ0D2H9 430 aa16.63■□□□□ 0.25
RLIM-202ENST00000349225 PACS2Q86VP3 889 aa16.63■□□□□ 0.25
RLIM-202ENST00000349225 ANO10Q9NW15 660 aa16.63■□□□□ 0.25
RLIM-202ENST00000349225 A0A0D9SFI3 127 aa16.62■□□□□ 0.25
RLIM-202ENST00000349225 PTPN21Q16825 1174 aa16.62■□□□□ 0.25
RLIM-202ENST00000349225 TEX2Q8IWB9 1127 aa16.62■□□□□ 0.25
RLIM-202ENST00000349225 GOLGA5Q8TBA6 731 aa16.62■□□□□ 0.25
RLIM-202ENST00000349225 RUFY2Q8WXA3 655 aa16.62■□□□□ 0.25
RLIM-202ENST00000349225 TTC41PQ6P2S7 1318 aa16.62■□□□□ 0.25
RLIM-202ENST00000349225 SFPQP23246 707 aaKnown RBP eCLIP16.62■□□□□ 0.25
RLIM-202ENST00000349225 FOSBP53539 338 aa16.62■□□□□ 0.25
RLIM-202ENST00000349225 BLOC1S2Q6QNY1 142 aa16.62■□□□□ 0.25
RLIM-202ENST00000349225 USP28Q96RU2 1077 aa16.62■□□□□ 0.25
RLIM-202ENST00000349225 RCOR1Q9UKL0 485 aa16.62■□□□□ 0.25
RLIM-202ENST00000349225 ATP8B1O43520 1251 aa16.62■□□□□ 0.25
RLIM-202ENST00000349225 SMC2O95347 1197 aa16.62■□□□□ 0.25
RLIM-202ENST00000349225 LMAN1P49257 510 aa16.62■□□□□ 0.25
RLIM-202ENST00000349225 HSD3B7Q9H2F3 369 aa16.62■□□□□ 0.25
RLIM-202ENST00000349225 LOC102724159A0A0B4J2E5 919 aa16.61■□□□□ 0.25
RLIM-202ENST00000349225 PWP2Q15269 919 aaKnown RBP16.61■□□□□ 0.25
RLIM-202ENST00000349225 CCDC30Q5VVM6 783 aa16.61■□□□□ 0.25
RLIM-202ENST00000349225 ICE2Q659A1 982 aa16.61■□□□□ 0.25
RLIM-202ENST00000349225 CEP57L1Q8IYX8 460 aa16.61■□□□□ 0.25
RLIM-202ENST00000349225 PXDNLA1KZ92 1463 aa16.61■□□□□ 0.25
RLIM-202ENST00000349225 CTAGE5O15320 804 aa16.61■□□□□ 0.25
RLIM-202ENST00000349225 NCAPHQ15003 741 aa16.61■□□□□ 0.25
RLIM-202ENST00000349225 CCDC150Q8NCX0 1101 aa16.61■□□□□ 0.25
RLIM-202ENST00000349225 MNS1Q8NEH6 495 aa16.61■□□□□ 0.25
RLIM-202ENST00000349225 GEMIN8Q9NWZ8 242 aaKnown RBP16.61■□□□□ 0.25
RLIM-202ENST00000349225 ZNF589Q86UQ0 364 aaPredicted RBP16.61■□□□□ 0.25
RLIM-202ENST00000349225 LRRFIP1Q32MZ4 808 aaKnown RBP16.6■□□□□ 0.25
RLIM-202ENST00000349225 ILDR1Q86SU0 546 aaPredicted RBP16.6■□□□□ 0.25
RLIM-202ENST00000349225 IQUBQ8NA54 791 aa16.6■□□□□ 0.25
RLIM-202ENST00000349225 WDR24Q96S15 920 aa16.6■□□□□ 0.25
RLIM-202ENST00000349225 PARD6BQ9BYG5 372 aa16.6■□□□□ 0.25
RLIM-202ENST00000349225 CACNA1FO60840 1977 aa16.6■□□□□ 0.25
RLIM-202ENST00000349225 VWA3AA6NCI4 1184 aa16.6■□□□□ 0.25
RLIM-202ENST00000349225 RSRC2Q7L4I2 434 aaKnown RBP16.6■□□□□ 0.25
RLIM-202ENST00000349225 ALDH8A1Q9H2A2 487 aaPredicted RBP16.6■□□□□ 0.25
RLIM-202ENST00000349225 GTF2A1P52655 376 aaPredicted RBP16.6■□□□□ 0.25
RLIM-202ENST00000349225 FAM160A1Q05DH4 1040 aa16.6■□□□□ 0.25
RLIM-202ENST00000349225 SECISBP2LQ93073 1101 aaKnown RBP16.6■□□□□ 0.25
RLIM-202ENST00000349225 EXOC4Q96A65 974 aa16.6■□□□□ 0.25
RLIM-202ENST00000349225 TSPOAP1O95153 1857 aa16.59■□□□□ 0.25
RLIM-202ENST00000349225 COL15A1P39059 1388 aa16.59■□□□□ 0.25
RLIM-202ENST00000349225 WASLO00401 505 aaPredicted RBP16.59■□□□□ 0.25
RLIM-202ENST00000349225 ATP1A3P13637 1013 aa16.59■□□□□ 0.25
RLIM-202ENST00000349225 PSD3Q9NYI0 1048 aa16.59■□□□□ 0.25
RLIM-202ENST00000349225 CFAP45Q9UL16 551 aa16.59■□□□□ 0.25
RLIM-202ENST00000349225 AKAP12Q02952 1782 aa16.59■□□□□ 0.25
RLIM-202ENST00000349225 PPFIA3O75145 1194 aa16.59■□□□□ 0.25
RLIM-202ENST00000349225 ACTN2P35609 894 aa16.59■□□□□ 0.25
RLIM-202ENST00000349225 FMR1NBQ8N0W7 255 aaPredicted RBP16.59■□□□□ 0.25
RLIM-202ENST00000349225 DPF2Q92785 391 aa16.59■□□□□ 0.25
RLIM-202ENST00000349225 ECHDC1Q9NTX5 307 aa16.59■□□□□ 0.25
RLIM-202ENST00000349225 PSMA5P28066 241 aa16.58■□□□□ 0.25
RLIM-202ENST00000349225 FAM177A1Q8N128 213 aaPredicted RBP16.58■□□□□ 0.25
RLIM-202ENST00000349225 PA2G4Q9UQ80 394 aaKnown RBP16.58■□□□□ 0.25
RLIM-202ENST00000349225 KINO60870 393 aaKnown RBP16.58■□□□□ 0.24
RLIM-202ENST00000349225 SCRN1Q12765 414 aa16.58■□□□□ 0.24
RLIM-202ENST00000349225 GPS2Q13227 327 aa16.58■□□□□ 0.24
RLIM-202ENST00000349225 FSIP1Q8NA03 581 aa16.58■□□□□ 0.24
RLIM-202ENST00000349225 FMNL2Q96PY5 1086 aa16.58■□□□□ 0.24
RLIM-202ENST00000349225 SNRKQ9NRH2 765 aa16.58■□□□□ 0.24
RLIM-202ENST00000349225 ABCC6O95255 1503 aa16.58■□□□□ 0.24
RLIM-202ENST00000349225 NUDT16Q96DE0 195 aaKnown RBP16.58■□□□□ 0.24
RLIM-202ENST00000349225 LRRC37A3O60309 1634 aa16.58■□□□□ 0.24
RLIM-202ENST00000349225 ANKRD65E5RJM6 399 aa16.57■□□□□ 0.24
RLIM-202ENST00000349225 N4BP1O75113 896 aaKnown RBP16.57■□□□□ 0.24
RLIM-202ENST00000349225 ANKRD1Q15327 319 aa16.57■□□□□ 0.24
RLIM-202ENST00000349225 TMEM139Q8IV31 216 aa16.57■□□□□ 0.24
RLIM-202ENST00000349225 SEC62Q99442 399 aaKnown RBP16.57■□□□□ 0.24
RLIM-202ENST00000349225 UTP14AQ9BVJ6 771 aaKnown RBP16.57■□□□□ 0.24
RLIM-202ENST00000349225 ZSCAN16Q9H4T2 348 aaPredicted RBP16.57■□□□□ 0.24
RLIM-202ENST00000349225 SPATA31D1Q6ZQQ2 1576 aa16.57■□□□□ 0.24
RLIM-202ENST00000349225 H3BQV1 296 aa16.57■□□□□ 0.24
RLIM-202ENST00000349225 MAP2K7O14733 419 aa16.57■□□□□ 0.24
RLIM-202ENST00000349225 CTDNEP1O95476 244 aa16.57■□□□□ 0.24
RLIM-202ENST00000349225 MAP3K9P80192 1104 aa16.57■□□□□ 0.24
RLIM-202ENST00000349225 IFFO2Q5TF58 517 aa16.57■□□□□ 0.24
RLIM-202ENST00000349225 EVI5LQ96CN4 794 aa16.57■□□□□ 0.24
RLIM-202ENST00000349225 A0A1B0GVL5 298 aa16.57■□□□□ 0.24
RLIM-202ENST00000349225 BIN1O00499 593 aa16.57■□□□□ 0.24
RLIM-202ENST00000349225 GPR161Q8N6U8 529 aaKnown RBP16.57■□□□□ 0.24
RLIM-202ENST00000349225 SLC52A1Q9NWF4 448 aa16.57■□□□□ 0.24
RLIM-202ENST00000349225 MED23Q9ULK4 1368 aa16.57■□□□□ 0.24
RLIM-202ENST00000349225 CHGBP05060 677 aa16.56■□□□□ 0.24
RLIM-202ENST00000349225 CCDC73Q6ZRK6 1079 aa16.56■□□□□ 0.24
RLIM-202ENST00000349225 SRRTQ9BXP5 876 aaKnown RBP16.56■□□□□ 0.24
RLIM-202ENST00000349225 LRRC2Q9BYS8 371 aa16.56■□□□□ 0.24
RLIM-202ENST00000349225 CEP170BQ9Y4F5 1589 aaPredicted RBP16.56■□□□□ 0.24
RLIM-202ENST00000349225 NDUFA8P51970 172 aa16.56■□□□□ 0.24
RLIM-202ENST00000349225 LONRF2Q1L5Z9 754 aa16.56■□□□□ 0.24
RLIM-202ENST00000349225 ARFGAP3Q9NP61 516 aa16.56■□□□□ 0.24
RLIM-202ENST00000349225 TOMM22Q9NS69 142 aa16.56■□□□□ 0.24
RLIM-202ENST00000349225 TLR7Q9NYK1 1049 aaKnown RBP16.56■□□□□ 0.24
RLIM-202ENST00000349225 MRFAP1Q9Y605 127 aa16.56■□□□□ 0.24
RLIM-202ENST00000349225 JCADQ9P266 1359 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms